Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae

Detalhes bibliográficos
Autor(a) principal: Goes,Caio Augusto Gomes
Data de Publicação: 2021
Outros Autores: Silva,Duílio Mazzoni Zerbinato de Andrade, Utsunomia,Ricardo, Yasui,George Shigueki, Artoni,Roberto Ferreira, Foresti,Fausto, Porto-Foresti,Fábio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300202
Resumo: Abstract Supernumerary, or B, chromosomes are present in several eukaryotes, including characid fish of the genus Psalidodon. Notably, Psalidodon paranae carries the most studied B chromosome variant, a macro-B chromosome. The origin of this element was determined to be an isochromosome; however, data regarding its inheritance remain unavailable due to methodological barriers such as the lack of an efficient, non-invasive, and rapid protocol for identifying B-carrying individuals that would enable the design of efficient crossing experiments. Thus, in this study, we primarily aimed was to develop two non-invasive and fast (approximately 2 h) methods to identify the presence of B chromosomes in live specimens of P. paranae based on satellite DNA (satDNA) sequences known to be present in this element. The methods include fluorescence in situ hybridization in interphase nuclei and relative gene quantification of satDNAs using quantitative polymerase chain reaction. Our results reveal the efficiency of quick-fluorescence in situ hybridization and quantitative polymerase chain reaction for identifying B-carrying individuals using the proposed satDNA sequences and open up new possibilities to study B chromosomes.
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spelling Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranaePsalidodonNeotropical fishessatellite DNAqPCRB chromosomesAbstract Supernumerary, or B, chromosomes are present in several eukaryotes, including characid fish of the genus Psalidodon. Notably, Psalidodon paranae carries the most studied B chromosome variant, a macro-B chromosome. The origin of this element was determined to be an isochromosome; however, data regarding its inheritance remain unavailable due to methodological barriers such as the lack of an efficient, non-invasive, and rapid protocol for identifying B-carrying individuals that would enable the design of efficient crossing experiments. Thus, in this study, we primarily aimed was to develop two non-invasive and fast (approximately 2 h) methods to identify the presence of B chromosomes in live specimens of P. paranae based on satellite DNA (satDNA) sequences known to be present in this element. The methods include fluorescence in situ hybridization in interphase nuclei and relative gene quantification of satDNAs using quantitative polymerase chain reaction. Our results reveal the efficiency of quick-fluorescence in situ hybridization and quantitative polymerase chain reaction for identifying B-carrying individuals using the proposed satDNA sequences and open up new possibilities to study B chromosomes.Sociedade Brasileira de Genética2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300202Genetics and Molecular Biology v.44 n.2 2021reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2020-0003info:eu-repo/semantics/openAccessGoes,Caio Augusto GomesSilva,Duílio Mazzoni Zerbinato de AndradeUtsunomia,RicardoYasui,George ShiguekiArtoni,Roberto FerreiraForesti,FaustoPorto-Foresti,Fábioeng2021-03-24T00:00:00Zoai:scielo:S1415-47572021000300202Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2021-03-24T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
title Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
spellingShingle Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
Goes,Caio Augusto Gomes
Psalidodon
Neotropical fishes
satellite DNA
qPCR
B chromosomes
title_short Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
title_full Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
title_fullStr Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
title_full_unstemmed Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
title_sort Establishment of rapid and non-invasive protocols to identify B-carrying individuals of Psalidodon paranae
author Goes,Caio Augusto Gomes
author_facet Goes,Caio Augusto Gomes
Silva,Duílio Mazzoni Zerbinato de Andrade
Utsunomia,Ricardo
Yasui,George Shigueki
Artoni,Roberto Ferreira
Foresti,Fausto
Porto-Foresti,Fábio
author_role author
author2 Silva,Duílio Mazzoni Zerbinato de Andrade
Utsunomia,Ricardo
Yasui,George Shigueki
Artoni,Roberto Ferreira
Foresti,Fausto
Porto-Foresti,Fábio
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Goes,Caio Augusto Gomes
Silva,Duílio Mazzoni Zerbinato de Andrade
Utsunomia,Ricardo
Yasui,George Shigueki
Artoni,Roberto Ferreira
Foresti,Fausto
Porto-Foresti,Fábio
dc.subject.por.fl_str_mv Psalidodon
Neotropical fishes
satellite DNA
qPCR
B chromosomes
topic Psalidodon
Neotropical fishes
satellite DNA
qPCR
B chromosomes
description Abstract Supernumerary, or B, chromosomes are present in several eukaryotes, including characid fish of the genus Psalidodon. Notably, Psalidodon paranae carries the most studied B chromosome variant, a macro-B chromosome. The origin of this element was determined to be an isochromosome; however, data regarding its inheritance remain unavailable due to methodological barriers such as the lack of an efficient, non-invasive, and rapid protocol for identifying B-carrying individuals that would enable the design of efficient crossing experiments. Thus, in this study, we primarily aimed was to develop two non-invasive and fast (approximately 2 h) methods to identify the presence of B chromosomes in live specimens of P. paranae based on satellite DNA (satDNA) sequences known to be present in this element. The methods include fluorescence in situ hybridization in interphase nuclei and relative gene quantification of satDNAs using quantitative polymerase chain reaction. Our results reveal the efficiency of quick-fluorescence in situ hybridization and quantitative polymerase chain reaction for identifying B-carrying individuals using the proposed satDNA sequences and open up new possibilities to study B chromosomes.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300202
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572021000300202
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2020-0003
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.44 n.2 2021
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
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reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
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