Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae

Detalhes bibliográficos
Autor(a) principal: Goes, Caio Augusto Gomes [UNESP]
Data de Publicação: 2021
Outros Autores: De Andrade Silva, Duílio Mazzoni Zerbinato [UNESP], Utsunomia, Ricardo, Yasui, George Shigueki, Artoni, Roberto Ferreira, Foresti, Fausto [UNESP], Porto-Foresti, Fábio [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/1678-4685-gmb-2020-0003
http://hdl.handle.net/11449/208561
Resumo: Supernumerary, or B, chromosomes are present in several eukaryotes, including characid fish of the genus Psalidodon. Notably, Psalidodon paranae carries the most studied B chromosome variant, a macro-B chromosome. The origin of this element was determined to be an isochromosome; however, data regarding its inheritance remain unavailable due to methodological barriers such as the lack of an efficient, non-invasive, and rapid protocol for identifying B-carrying individuals that would enable the design of efficient crossing experiments. Thus, in this study, we primarily aimed was to develop two non-invasive and fast (approximately 2 h) methods to identify the presence of B chromosomes in live specimens of P. paranae based on satellite DNA (satDNA) sequences known to be present in this element. The methods include fluorescence in situ hybridization in interphase nuclei and relative gene quantification of satDNAs using quantitative polymerase chain reaction. Our results reveal the efficiency of quickfluorescence in situ hybridization and quantitative polymerase chain reaction for identifying B-carrying individuals using the proposed satDNA sequences and open up new possibilities to study B chromosomes.
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spelling Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranaeB chromosomesNeotropical fishesPsalidodonQPCRSatellite DNASupernumerary, or B, chromosomes are present in several eukaryotes, including characid fish of the genus Psalidodon. Notably, Psalidodon paranae carries the most studied B chromosome variant, a macro-B chromosome. The origin of this element was determined to be an isochromosome; however, data regarding its inheritance remain unavailable due to methodological barriers such as the lack of an efficient, non-invasive, and rapid protocol for identifying B-carrying individuals that would enable the design of efficient crossing experiments. Thus, in this study, we primarily aimed was to develop two non-invasive and fast (approximately 2 h) methods to identify the presence of B chromosomes in live specimens of P. paranae based on satellite DNA (satDNA) sequences known to be present in this element. The methods include fluorescence in situ hybridization in interphase nuclei and relative gene quantification of satDNAs using quantitative polymerase chain reaction. Our results reveal the efficiency of quickfluorescence in situ hybridization and quantitative polymerase chain reaction for identifying B-carrying individuals using the proposed satDNA sequences and open up new possibilities to study B chromosomes.Universidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP) Faculdade de CiênciasUniversidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP) Instituto de BiociênciasUniversidade Federal Rural do Rio de Janeiro Instituto de Ciências Biológicas e da Saúde ICBSCentro nacional de Pesquisa e Conservação da Biota Aquática Continental (CEPTA-ICMBIO)Universidade Estadual de Ponta Grossa Setor de Ciências Biológicas e da SaúdeUniversidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP) Faculdade de CiênciasUniversidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP) Instituto de BiociênciasUniversidade Estadual Paulista (Unesp)ICBSCentro nacional de Pesquisa e Conservação da Biota Aquática Continental (CEPTA-ICMBIO)Universidade Estadual de Ponta Grossa (UEPG)Goes, Caio Augusto Gomes [UNESP]De Andrade Silva, Duílio Mazzoni Zerbinato [UNESP]Utsunomia, RicardoYasui, George ShiguekiArtoni, Roberto FerreiraForesti, Fausto [UNESP]Porto-Foresti, Fábio [UNESP]2021-06-25T11:14:11Z2021-06-25T11:14:11Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://dx.doi.org/10.1590/1678-4685-gmb-2020-0003Genetics and Molecular Biology, v. 44, n. 2, 2021.1678-46851415-4757http://hdl.handle.net/11449/20856110.1590/1678-4685-gmb-2020-0003S1415-475720210003002022-s2.0-85103627239S1415-47572021000300202.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biologyinfo:eu-repo/semantics/openAccess2024-04-23T15:23:17Zoai:repositorio.unesp.br:11449/208561Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T16:51:12.953042Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
title Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
spellingShingle Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
Goes, Caio Augusto Gomes [UNESP]
B chromosomes
Neotropical fishes
Psalidodon
QPCR
Satellite DNA
title_short Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
title_full Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
title_fullStr Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
title_full_unstemmed Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
title_sort Establishment of rapid and non-invasive protocols to identify b-carrying individuals of psalidodon paranae
author Goes, Caio Augusto Gomes [UNESP]
author_facet Goes, Caio Augusto Gomes [UNESP]
De Andrade Silva, Duílio Mazzoni Zerbinato [UNESP]
Utsunomia, Ricardo
Yasui, George Shigueki
Artoni, Roberto Ferreira
Foresti, Fausto [UNESP]
Porto-Foresti, Fábio [UNESP]
author_role author
author2 De Andrade Silva, Duílio Mazzoni Zerbinato [UNESP]
Utsunomia, Ricardo
Yasui, George Shigueki
Artoni, Roberto Ferreira
Foresti, Fausto [UNESP]
Porto-Foresti, Fábio [UNESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
ICBS
Centro nacional de Pesquisa e Conservação da Biota Aquática Continental (CEPTA-ICMBIO)
Universidade Estadual de Ponta Grossa (UEPG)
dc.contributor.author.fl_str_mv Goes, Caio Augusto Gomes [UNESP]
De Andrade Silva, Duílio Mazzoni Zerbinato [UNESP]
Utsunomia, Ricardo
Yasui, George Shigueki
Artoni, Roberto Ferreira
Foresti, Fausto [UNESP]
Porto-Foresti, Fábio [UNESP]
dc.subject.por.fl_str_mv B chromosomes
Neotropical fishes
Psalidodon
QPCR
Satellite DNA
topic B chromosomes
Neotropical fishes
Psalidodon
QPCR
Satellite DNA
description Supernumerary, or B, chromosomes are present in several eukaryotes, including characid fish of the genus Psalidodon. Notably, Psalidodon paranae carries the most studied B chromosome variant, a macro-B chromosome. The origin of this element was determined to be an isochromosome; however, data regarding its inheritance remain unavailable due to methodological barriers such as the lack of an efficient, non-invasive, and rapid protocol for identifying B-carrying individuals that would enable the design of efficient crossing experiments. Thus, in this study, we primarily aimed was to develop two non-invasive and fast (approximately 2 h) methods to identify the presence of B chromosomes in live specimens of P. paranae based on satellite DNA (satDNA) sequences known to be present in this element. The methods include fluorescence in situ hybridization in interphase nuclei and relative gene quantification of satDNAs using quantitative polymerase chain reaction. Our results reveal the efficiency of quickfluorescence in situ hybridization and quantitative polymerase chain reaction for identifying B-carrying individuals using the proposed satDNA sequences and open up new possibilities to study B chromosomes.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25T11:14:11Z
2021-06-25T11:14:11Z
2021-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1678-4685-gmb-2020-0003
Genetics and Molecular Biology, v. 44, n. 2, 2021.
1678-4685
1415-4757
http://hdl.handle.net/11449/208561
10.1590/1678-4685-gmb-2020-0003
S1415-47572021000300202
2-s2.0-85103627239
S1415-47572021000300202.pdf
url http://dx.doi.org/10.1590/1678-4685-gmb-2020-0003
http://hdl.handle.net/11449/208561
identifier_str_mv Genetics and Molecular Biology, v. 44, n. 2, 2021.
1678-4685
1415-4757
10.1590/1678-4685-gmb-2020-0003
S1415-47572021000300202
2-s2.0-85103627239
S1415-47572021000300202.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genetics and Molecular Biology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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