Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)

Detalhes bibliográficos
Autor(a) principal: El Faro,Lenira
Data de Publicação: 2008
Outros Autores: Cardoso,Vera Lucia, Albuquerque,Lucia Galvão de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000400011
Resumo: Random regression models (RRM) were used to estimate covariance functions for 2,155 first-lactation milk yields of native Brazilian Caracu heifers. The models included contemporary group (defined as year-month of test and paddock) fixed effects, and quadratic effect of age of cow at calving. Genetic and permanent environmental effects were fitted by a random regression model and Legendre polynomials of days in milk (DIM). Schwarz's Bayesian information criteria (BIC) indicated that the best RRM assumed a six coefficient function for both random effects and a sixth order variance function for residual structure. Akaike's information criteria suggested a model with the same number of coefficients for both effects and a residual structure fitted by a step function with 15 variances. Phenotypic, additive genetic, permanent environmental and residual variances were higher at the beginning and declined during lactation. The RRM heritability estimates were 0.09 to 0.26 and generally higher at the beginning and end of lactation. Some unexpected negative genetic correlations emerged when higher order covariance functions were used. A model with four coefficients for additive genetic covariance function explains more parsimoniously the changes in genetic variation with DIM since the genetic parameter was more acceptable and BIC was close to that for a six coefficient covariance function.
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spelling Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)covariance functionsdairy cattlegenetic parameterslongitudinal datamilk yieldRandom regression models (RRM) were used to estimate covariance functions for 2,155 first-lactation milk yields of native Brazilian Caracu heifers. The models included contemporary group (defined as year-month of test and paddock) fixed effects, and quadratic effect of age of cow at calving. Genetic and permanent environmental effects were fitted by a random regression model and Legendre polynomials of days in milk (DIM). Schwarz's Bayesian information criteria (BIC) indicated that the best RRM assumed a six coefficient function for both random effects and a sixth order variance function for residual structure. Akaike's information criteria suggested a model with the same number of coefficients for both effects and a residual structure fitted by a step function with 15 variances. Phenotypic, additive genetic, permanent environmental and residual variances were higher at the beginning and declined during lactation. The RRM heritability estimates were 0.09 to 0.26 and generally higher at the beginning and end of lactation. Some unexpected negative genetic correlations emerged when higher order covariance functions were used. A model with four coefficients for additive genetic covariance function explains more parsimoniously the changes in genetic variation with DIM since the genetic parameter was more acceptable and BIC was close to that for a six coefficient covariance function.Sociedade Brasileira de Genética2008-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000400011Genetics and Molecular Biology v.31 n.3 2008reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572008000400011info:eu-repo/semantics/openAccessEl Faro,LeniraCardoso,Vera LuciaAlbuquerque,Lucia Galvão deeng2008-08-18T00:00:00Zoai:scielo:S1415-47572008000400011Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2008-08-18T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
title Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
spellingShingle Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
El Faro,Lenira
covariance functions
dairy cattle
genetic parameters
longitudinal data
milk yield
title_short Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
title_full Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
title_fullStr Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
title_full_unstemmed Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
title_sort Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
author El Faro,Lenira
author_facet El Faro,Lenira
Cardoso,Vera Lucia
Albuquerque,Lucia Galvão de
author_role author
author2 Cardoso,Vera Lucia
Albuquerque,Lucia Galvão de
author2_role author
author
dc.contributor.author.fl_str_mv El Faro,Lenira
Cardoso,Vera Lucia
Albuquerque,Lucia Galvão de
dc.subject.por.fl_str_mv covariance functions
dairy cattle
genetic parameters
longitudinal data
milk yield
topic covariance functions
dairy cattle
genetic parameters
longitudinal data
milk yield
description Random regression models (RRM) were used to estimate covariance functions for 2,155 first-lactation milk yields of native Brazilian Caracu heifers. The models included contemporary group (defined as year-month of test and paddock) fixed effects, and quadratic effect of age of cow at calving. Genetic and permanent environmental effects were fitted by a random regression model and Legendre polynomials of days in milk (DIM). Schwarz's Bayesian information criteria (BIC) indicated that the best RRM assumed a six coefficient function for both random effects and a sixth order variance function for residual structure. Akaike's information criteria suggested a model with the same number of coefficients for both effects and a residual structure fitted by a step function with 15 variances. Phenotypic, additive genetic, permanent environmental and residual variances were higher at the beginning and declined during lactation. The RRM heritability estimates were 0.09 to 0.26 and generally higher at the beginning and end of lactation. Some unexpected negative genetic correlations emerged when higher order covariance functions were used. A model with four coefficients for additive genetic covariance function explains more parsimoniously the changes in genetic variation with DIM since the genetic parameter was more acceptable and BIC was close to that for a six coefficient covariance function.
publishDate 2008
dc.date.none.fl_str_mv 2008-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000400011
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572008000400011
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572008000400011
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.31 n.3 2008
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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