The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)

Detalhes bibliográficos
Autor(a) principal: Moreira,Daniel A.
Data de Publicação: 2016
Outros Autores: Buckup,Paulo A., Britto,Marcelo R., Magalhães,Maithê G. P., Andrade,Paula C. C. de, Furtado,Carolina, Parente,Thiago E.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Neotropical ichthyology (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252016000100218
Resumo: ABSTRACT The complete mitogenome of Corydoras nattereri , a species of mailed catfishes from southeastern Brazil, was reconstructed using next-generation sequencing techniques. The mitogenome was assembled using mitochondrial transcripts from the liver transcriptomes of three individuals, and produced a circular DNA sequence of 16,557 nucleotides encoding 22 tRNA genes, two rRNA genes, 13 protein-coding genes and two noncoding control regions (D-loop, OrigL). Phylogeographic analysis of closely related sequences of Cytochrome Oxydase C subunit I (COI) demonstrates high diversity among morphologically similar populations of C. nattereri . Corydoras nattereri is nested within a complex of populations currently assigned to C. paleatus and C. ehrhardti . Analysis of mitogenome structure demonstrated that an insertion of 21 nucleotides between the ATPase subunit-6 and COIII genes may represent a phylogenetically informative character associated with the evolution of the Corydoradinae.
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spelling The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)BarcodeDNAMitogenomeMolecular diversitymtRNA.ABSTRACT The complete mitogenome of Corydoras nattereri , a species of mailed catfishes from southeastern Brazil, was reconstructed using next-generation sequencing techniques. The mitogenome was assembled using mitochondrial transcripts from the liver transcriptomes of three individuals, and produced a circular DNA sequence of 16,557 nucleotides encoding 22 tRNA genes, two rRNA genes, 13 protein-coding genes and two noncoding control regions (D-loop, OrigL). Phylogeographic analysis of closely related sequences of Cytochrome Oxydase C subunit I (COI) demonstrates high diversity among morphologically similar populations of C. nattereri . Corydoras nattereri is nested within a complex of populations currently assigned to C. paleatus and C. ehrhardti . Analysis of mitogenome structure demonstrated that an insertion of 21 nucleotides between the ATPase subunit-6 and COIII genes may represent a phylogenetically informative character associated with the evolution of the Corydoradinae.Sociedade Brasileira de Ictiologia2016-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252016000100218Neotropical Ichthyology v.14 n.1 2016reponame:Neotropical ichthyology (Online)instname:Sociedade Brasileira de Ictiologia (SBI)instacron:SBI10.1590/1982-0224-20150167info:eu-repo/semantics/openAccessMoreira,Daniel A.Buckup,Paulo A.Britto,Marcelo R.Magalhães,Maithê G. P.Andrade,Paula C. C. deFurtado,CarolinaParente,Thiago E.eng2016-04-07T00:00:00Zoai:scielo:S1679-62252016000100218Revistahttp://www.ufrgs.br/ni/https://old.scielo.br/oai/scielo-oai.php||neoichth@nupelia.uem.br1982-02241679-6225opendoar:2016-04-07T00:00Neotropical ichthyology (Online) - Sociedade Brasileira de Ictiologia (SBI)false
dc.title.none.fl_str_mv The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
title The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
spellingShingle The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
Moreira,Daniel A.
Barcode
DNA
Mitogenome
Molecular diversity
mtRNA.
title_short The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
title_full The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
title_fullStr The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
title_full_unstemmed The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
title_sort The complete mitochondrial genome of Corydoras nattereri (Callichthyidae: Corydoradinae)
author Moreira,Daniel A.
author_facet Moreira,Daniel A.
Buckup,Paulo A.
Britto,Marcelo R.
Magalhães,Maithê G. P.
Andrade,Paula C. C. de
Furtado,Carolina
Parente,Thiago E.
author_role author
author2 Buckup,Paulo A.
Britto,Marcelo R.
Magalhães,Maithê G. P.
Andrade,Paula C. C. de
Furtado,Carolina
Parente,Thiago E.
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Moreira,Daniel A.
Buckup,Paulo A.
Britto,Marcelo R.
Magalhães,Maithê G. P.
Andrade,Paula C. C. de
Furtado,Carolina
Parente,Thiago E.
dc.subject.por.fl_str_mv Barcode
DNA
Mitogenome
Molecular diversity
mtRNA.
topic Barcode
DNA
Mitogenome
Molecular diversity
mtRNA.
description ABSTRACT The complete mitogenome of Corydoras nattereri , a species of mailed catfishes from southeastern Brazil, was reconstructed using next-generation sequencing techniques. The mitogenome was assembled using mitochondrial transcripts from the liver transcriptomes of three individuals, and produced a circular DNA sequence of 16,557 nucleotides encoding 22 tRNA genes, two rRNA genes, 13 protein-coding genes and two noncoding control regions (D-loop, OrigL). Phylogeographic analysis of closely related sequences of Cytochrome Oxydase C subunit I (COI) demonstrates high diversity among morphologically similar populations of C. nattereri . Corydoras nattereri is nested within a complex of populations currently assigned to C. paleatus and C. ehrhardti . Analysis of mitogenome structure demonstrated that an insertion of 21 nucleotides between the ATPase subunit-6 and COIII genes may represent a phylogenetically informative character associated with the evolution of the Corydoradinae.
publishDate 2016
dc.date.none.fl_str_mv 2016-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252016000100218
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252016000100218
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1982-0224-20150167
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Ictiologia
publisher.none.fl_str_mv Sociedade Brasileira de Ictiologia
dc.source.none.fl_str_mv Neotropical Ichthyology v.14 n.1 2016
reponame:Neotropical ichthyology (Online)
instname:Sociedade Brasileira de Ictiologia (SBI)
instacron:SBI
instname_str Sociedade Brasileira de Ictiologia (SBI)
instacron_str SBI
institution SBI
reponame_str Neotropical ichthyology (Online)
collection Neotropical ichthyology (Online)
repository.name.fl_str_mv Neotropical ichthyology (Online) - Sociedade Brasileira de Ictiologia (SBI)
repository.mail.fl_str_mv ||neoichth@nupelia.uem.br
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