Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network

Detalhes bibliográficos
Autor(a) principal: Ding,D.W.
Data de Publicação: 2009
Outros Autores: Ding,Y.R., Li,L.N., Cai,Y.J., Xu,W.B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Microbiology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822009000200036
Resumo: The purpose of this work was to study the giant strong component (GSC) of B. thuringiensis metabolic network by structural and functional analysis. Based on so-called "bow tie" structure, we extracted and studied GSC with its functional significance. Global structural properties such as degree distribution and average path length were computed and indicated that the GSC is also a small-world and scale-free network. Furthermore, the GSC was decomposed and functional significant for metabolism of these divisions were investigated by comparing to KEGG metabolic pathways.
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spelling Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic NetworkBacillus thuringiensisGiant Strong Componentmetabolic networkThe purpose of this work was to study the giant strong component (GSC) of B. thuringiensis metabolic network by structural and functional analysis. Based on so-called "bow tie" structure, we extracted and studied GSC with its functional significance. Global structural properties such as degree distribution and average path length were computed and indicated that the GSC is also a small-world and scale-free network. Furthermore, the GSC was decomposed and functional significant for metabolism of these divisions were investigated by comparing to KEGG metabolic pathways.Sociedade Brasileira de Microbiologia2009-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822009000200036Brazilian Journal of Microbiology v.40 n.2 2009reponame:Brazilian Journal of Microbiologyinstname:Sociedade Brasileira de Microbiologia (SBM)instacron:SBM10.1590/S1517-83822009000200036info:eu-repo/semantics/openAccessDing,D.W.Ding,Y.R.Li,L.N.Cai,Y.J.Xu,W.B.eng2009-07-24T00:00:00Zoai:scielo:S1517-83822009000200036Revistahttps://www.scielo.br/j/bjm/ONGhttps://old.scielo.br/oai/scielo-oai.phpbjm@sbmicrobiologia.org.br||mbmartin@usp.br1678-44051517-8382opendoar:2009-07-24T00:00Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)false
dc.title.none.fl_str_mv Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
title Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
spellingShingle Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
Ding,D.W.
Bacillus thuringiensis
Giant Strong Component
metabolic network
title_short Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
title_full Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
title_fullStr Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
title_full_unstemmed Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
title_sort Structural and Functional Analysis of Giant Strong Component of Bacillus thuringiensis Metabolic Network
author Ding,D.W.
author_facet Ding,D.W.
Ding,Y.R.
Li,L.N.
Cai,Y.J.
Xu,W.B.
author_role author
author2 Ding,Y.R.
Li,L.N.
Cai,Y.J.
Xu,W.B.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Ding,D.W.
Ding,Y.R.
Li,L.N.
Cai,Y.J.
Xu,W.B.
dc.subject.por.fl_str_mv Bacillus thuringiensis
Giant Strong Component
metabolic network
topic Bacillus thuringiensis
Giant Strong Component
metabolic network
description The purpose of this work was to study the giant strong component (GSC) of B. thuringiensis metabolic network by structural and functional analysis. Based on so-called "bow tie" structure, we extracted and studied GSC with its functional significance. Global structural properties such as degree distribution and average path length were computed and indicated that the GSC is also a small-world and scale-free network. Furthermore, the GSC was decomposed and functional significant for metabolism of these divisions were investigated by comparing to KEGG metabolic pathways.
publishDate 2009
dc.date.none.fl_str_mv 2009-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822009000200036
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822009000200036
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1517-83822009000200036
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
dc.source.none.fl_str_mv Brazilian Journal of Microbiology v.40 n.2 2009
reponame:Brazilian Journal of Microbiology
instname:Sociedade Brasileira de Microbiologia (SBM)
instacron:SBM
instname_str Sociedade Brasileira de Microbiologia (SBM)
instacron_str SBM
institution SBM
reponame_str Brazilian Journal of Microbiology
collection Brazilian Journal of Microbiology
repository.name.fl_str_mv Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)
repository.mail.fl_str_mv bjm@sbmicrobiologia.org.br||mbmartin@usp.br
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