Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress

Detalhes bibliográficos
Autor(a) principal: Santhyia,Anix Vivek
Data de Publicação: 2015
Outros Autores: Mulloorpeedikayil,Rosalind George, Kollanoor,Riji John, Jeyaseelan,Prince M.J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Microbiology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000401001
Resumo: A study was performed to investigate the genomic variations in the shrimp farm isolates of Vibrio alginolyticus and V. harveyi when the isolates were subjected to environmental stress. Samples of shrimps, water and sediment were collected from Southern Indian coastal shrimp farms. Vibrio isolates were biochemically identified and confirmed using 16S rDNA and gyrB gene specific PCR. The bacterial strains were genotyped by PCR fingerprinting using GTG(5) and IS (Insertion Sequence) primers. Seven strains each of V. alginolyticus and V. harveyi were subjected to 10 passages through trypticase soya broth (TSB), which contained different NaCl concentrations (3, 6 and 8%) and trypticase soya agar (TSA). V. alginolyticus was also passaged through TSB with a 12% NaCl concentration. PCR fingerprinting, which was performed on the strains that were passaged through different salt concentrations, confirmed that V. alginolyticus and V. harveyi could affect the genomic variations, depending on the environmental conditions of the culture. The study highlights the complex genotypic variations that occur in Vibrio strains of tropical aquatic environment because of varied environmental conditions, which result in genetic divergence and/or probable convergence. Such genetic divergence and/or convergence can lead to the organismal adaptive variation, which results in their ability to cause a productive infection in aquatic organisms or generation of new strains.
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spelling Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stressVibrio harveyiVibrio alginolyticusmolecular variationshrimpPenaeus monodonA study was performed to investigate the genomic variations in the shrimp farm isolates of Vibrio alginolyticus and V. harveyi when the isolates were subjected to environmental stress. Samples of shrimps, water and sediment were collected from Southern Indian coastal shrimp farms. Vibrio isolates were biochemically identified and confirmed using 16S rDNA and gyrB gene specific PCR. The bacterial strains were genotyped by PCR fingerprinting using GTG(5) and IS (Insertion Sequence) primers. Seven strains each of V. alginolyticus and V. harveyi were subjected to 10 passages through trypticase soya broth (TSB), which contained different NaCl concentrations (3, 6 and 8%) and trypticase soya agar (TSA). V. alginolyticus was also passaged through TSB with a 12% NaCl concentration. PCR fingerprinting, which was performed on the strains that were passaged through different salt concentrations, confirmed that V. alginolyticus and V. harveyi could affect the genomic variations, depending on the environmental conditions of the culture. The study highlights the complex genotypic variations that occur in Vibrio strains of tropical aquatic environment because of varied environmental conditions, which result in genetic divergence and/or probable convergence. Such genetic divergence and/or convergence can lead to the organismal adaptive variation, which results in their ability to cause a productive infection in aquatic organisms or generation of new strains.Sociedade Brasileira de Microbiologia2015-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000401001Brazilian Journal of Microbiology v.46 n.4 2015reponame:Brazilian Journal of Microbiologyinstname:Sociedade Brasileira de Microbiologia (SBM)instacron:SBM10.1590/S1517-838246420140410info:eu-repo/semantics/openAccessSanthyia,Anix VivekMulloorpeedikayil,Rosalind GeorgeKollanoor,Riji JohnJeyaseelan,Prince M.J.eng2015-12-17T00:00:00Zoai:scielo:S1517-83822015000401001Revistahttps://www.scielo.br/j/bjm/ONGhttps://old.scielo.br/oai/scielo-oai.phpbjm@sbmicrobiologia.org.br||mbmartin@usp.br1678-44051517-8382opendoar:2015-12-17T00:00Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)false
dc.title.none.fl_str_mv Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
title Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
spellingShingle Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
Santhyia,Anix Vivek
Vibrio harveyi
Vibrio alginolyticus
molecular variation
shrimp
Penaeus monodon
title_short Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
title_full Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
title_fullStr Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
title_full_unstemmed Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
title_sort Molecular variations in Vibrio alginolyticus and V. harveyi in shrimp-farming systems upon stress
author Santhyia,Anix Vivek
author_facet Santhyia,Anix Vivek
Mulloorpeedikayil,Rosalind George
Kollanoor,Riji John
Jeyaseelan,Prince M.J.
author_role author
author2 Mulloorpeedikayil,Rosalind George
Kollanoor,Riji John
Jeyaseelan,Prince M.J.
author2_role author
author
author
dc.contributor.author.fl_str_mv Santhyia,Anix Vivek
Mulloorpeedikayil,Rosalind George
Kollanoor,Riji John
Jeyaseelan,Prince M.J.
dc.subject.por.fl_str_mv Vibrio harveyi
Vibrio alginolyticus
molecular variation
shrimp
Penaeus monodon
topic Vibrio harveyi
Vibrio alginolyticus
molecular variation
shrimp
Penaeus monodon
description A study was performed to investigate the genomic variations in the shrimp farm isolates of Vibrio alginolyticus and V. harveyi when the isolates were subjected to environmental stress. Samples of shrimps, water and sediment were collected from Southern Indian coastal shrimp farms. Vibrio isolates were biochemically identified and confirmed using 16S rDNA and gyrB gene specific PCR. The bacterial strains were genotyped by PCR fingerprinting using GTG(5) and IS (Insertion Sequence) primers. Seven strains each of V. alginolyticus and V. harveyi were subjected to 10 passages through trypticase soya broth (TSB), which contained different NaCl concentrations (3, 6 and 8%) and trypticase soya agar (TSA). V. alginolyticus was also passaged through TSB with a 12% NaCl concentration. PCR fingerprinting, which was performed on the strains that were passaged through different salt concentrations, confirmed that V. alginolyticus and V. harveyi could affect the genomic variations, depending on the environmental conditions of the culture. The study highlights the complex genotypic variations that occur in Vibrio strains of tropical aquatic environment because of varied environmental conditions, which result in genetic divergence and/or probable convergence. Such genetic divergence and/or convergence can lead to the organismal adaptive variation, which results in their ability to cause a productive infection in aquatic organisms or generation of new strains.
publishDate 2015
dc.date.none.fl_str_mv 2015-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000401001
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000401001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1517-838246420140410
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
dc.source.none.fl_str_mv Brazilian Journal of Microbiology v.46 n.4 2015
reponame:Brazilian Journal of Microbiology
instname:Sociedade Brasileira de Microbiologia (SBM)
instacron:SBM
instname_str Sociedade Brasileira de Microbiologia (SBM)
instacron_str SBM
institution SBM
reponame_str Brazilian Journal of Microbiology
collection Brazilian Journal of Microbiology
repository.name.fl_str_mv Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)
repository.mail.fl_str_mv bjm@sbmicrobiologia.org.br||mbmartin@usp.br
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