Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Revista da Sociedade Brasileira de Medicina Tropical |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822008000100001 |
Resumo: | Thirty-four Candida isolates were analyzed by random amplified polymorphic DNA using the primer OPG-10:24 Candida albicans; 4 Candida tropicalis; 2 Candida parapsilosis; 2 Candida dubliniensis; 1 Candida glabrata and 1 Candida krusei. The UPGMA-Pearson correlation coefficient was used to calculate the genetic distance between the different Candida groupings. Samples were classified as identical (correlation of 100%); highly related samples (90%); moderately related samples (80%) and unrelated samples (< 70%). The results showed that the RAPD proposed was capable of classifying the isolates coherently (such that same species were in the same dendrogram), except for two isolates of Candida parapsilosis and the positive control (Netherlands, 1973), probably because they are now recognized as three different species. Concerning the only fluconazole-resistant Candida tropicalis isolate with a genotype that was different to the others, the data were insufficient to affirm that the only difference was the sensitivity to fluconazole. We concluded that the Random Amplified Polymorphic DNA proposed might be used to confirm Candida species identified by microbiological methods. |
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Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNARAPDCandidiasisCandida sppPolymorphismMolecular typingThirty-four Candida isolates were analyzed by random amplified polymorphic DNA using the primer OPG-10:24 Candida albicans; 4 Candida tropicalis; 2 Candida parapsilosis; 2 Candida dubliniensis; 1 Candida glabrata and 1 Candida krusei. The UPGMA-Pearson correlation coefficient was used to calculate the genetic distance between the different Candida groupings. Samples were classified as identical (correlation of 100%); highly related samples (90%); moderately related samples (80%) and unrelated samples (< 70%). The results showed that the RAPD proposed was capable of classifying the isolates coherently (such that same species were in the same dendrogram), except for two isolates of Candida parapsilosis and the positive control (Netherlands, 1973), probably because they are now recognized as three different species. Concerning the only fluconazole-resistant Candida tropicalis isolate with a genotype that was different to the others, the data were insufficient to affirm that the only difference was the sensitivity to fluconazole. We concluded that the Random Amplified Polymorphic DNA proposed might be used to confirm Candida species identified by microbiological methods.Sociedade Brasileira de Medicina Tropical - SBMT2008-02-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822008000100001Revista da Sociedade Brasileira de Medicina Tropical v.41 n.1 2008reponame:Revista da Sociedade Brasileira de Medicina Tropicalinstname:Sociedade Brasileira de Medicina Tropical (SBMT)instacron:SBMT10.1590/S0037-86822008000100001info:eu-repo/semantics/openAccessRocha,Bruno AragãoDel Negro,Gilda Maria BarbaroYamamoto,LidiaSouza,Mariana Vitule Brito dePrecioso,Alexander RobertoOkay,Thelma Suelyeng2008-03-12T00:00:00Zoai:scielo:S0037-86822008000100001Revistahttps://www.sbmt.org.br/portal/revista/ONGhttps://old.scielo.br/oai/scielo-oai.php||dalmo@rsbmt.uftm.edu.br|| rsbmt@rsbmt.uftm.edu.br1678-98490037-8682opendoar:2008-03-12T00:00Revista da Sociedade Brasileira de Medicina Tropical - Sociedade Brasileira de Medicina Tropical (SBMT)false |
dc.title.none.fl_str_mv |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
title |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
spellingShingle |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA Rocha,Bruno Aragão RAPD Candidiasis Candida spp Polymorphism Molecular typing |
title_short |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
title_full |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
title_fullStr |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
title_full_unstemmed |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
title_sort |
Identification and differentiation of Candida species from pediatric patients by random amplified polymorphic DNA |
author |
Rocha,Bruno Aragão |
author_facet |
Rocha,Bruno Aragão Del Negro,Gilda Maria Barbaro Yamamoto,Lidia Souza,Mariana Vitule Brito de Precioso,Alexander Roberto Okay,Thelma Suely |
author_role |
author |
author2 |
Del Negro,Gilda Maria Barbaro Yamamoto,Lidia Souza,Mariana Vitule Brito de Precioso,Alexander Roberto Okay,Thelma Suely |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Rocha,Bruno Aragão Del Negro,Gilda Maria Barbaro Yamamoto,Lidia Souza,Mariana Vitule Brito de Precioso,Alexander Roberto Okay,Thelma Suely |
dc.subject.por.fl_str_mv |
RAPD Candidiasis Candida spp Polymorphism Molecular typing |
topic |
RAPD Candidiasis Candida spp Polymorphism Molecular typing |
description |
Thirty-four Candida isolates were analyzed by random amplified polymorphic DNA using the primer OPG-10:24 Candida albicans; 4 Candida tropicalis; 2 Candida parapsilosis; 2 Candida dubliniensis; 1 Candida glabrata and 1 Candida krusei. The UPGMA-Pearson correlation coefficient was used to calculate the genetic distance between the different Candida groupings. Samples were classified as identical (correlation of 100%); highly related samples (90%); moderately related samples (80%) and unrelated samples (< 70%). The results showed that the RAPD proposed was capable of classifying the isolates coherently (such that same species were in the same dendrogram), except for two isolates of Candida parapsilosis and the positive control (Netherlands, 1973), probably because they are now recognized as three different species. Concerning the only fluconazole-resistant Candida tropicalis isolate with a genotype that was different to the others, the data were insufficient to affirm that the only difference was the sensitivity to fluconazole. We concluded that the Random Amplified Polymorphic DNA proposed might be used to confirm Candida species identified by microbiological methods. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-02-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822008000100001 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0037-86822008000100001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0037-86822008000100001 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Medicina Tropical - SBMT |
publisher.none.fl_str_mv |
Sociedade Brasileira de Medicina Tropical - SBMT |
dc.source.none.fl_str_mv |
Revista da Sociedade Brasileira de Medicina Tropical v.41 n.1 2008 reponame:Revista da Sociedade Brasileira de Medicina Tropical instname:Sociedade Brasileira de Medicina Tropical (SBMT) instacron:SBMT |
instname_str |
Sociedade Brasileira de Medicina Tropical (SBMT) |
instacron_str |
SBMT |
institution |
SBMT |
reponame_str |
Revista da Sociedade Brasileira de Medicina Tropical |
collection |
Revista da Sociedade Brasileira de Medicina Tropical |
repository.name.fl_str_mv |
Revista da Sociedade Brasileira de Medicina Tropical - Sociedade Brasileira de Medicina Tropical (SBMT) |
repository.mail.fl_str_mv |
||dalmo@rsbmt.uftm.edu.br|| rsbmt@rsbmt.uftm.edu.br |
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1752122154113040384 |