A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity

Detalhes bibliográficos
Autor(a) principal: Alves,Claúdio N.
Data de Publicação: 2002
Outros Autores: Macedo,Luiz G. M. de, Honório,Káthia M., Camargo,Ademir J., Santos,Lourival S., Jardim,Iselino N., Barata,Lauro E. S., Silva,Albérico B. F. da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003
Resumo: A set of eighteen neolignan derivative compounds with anti-schistosomiasis activity was studied by using the quantum mechanical semi-empirical method PM3 and other theoretical methods in order to calculate selected molecular properties (variables or descriptors) to be correlated to their biological activities. Exploratory data analysis (principal component analysis, PCA, and hierarchical cluster analysis, HCA), discriminant analysis (DA) and the Kth nearest neighbor (KNN) method were employed for obtaining possible relationships between the calculated descriptors and the biological activities studied and predicting the anti-schistosomiasis activity of new compounds from a test set. The molecular descriptors responsible for the separation between active and inactive compounds were: hydration energy (HE), molecular refractivity (MR) and charge on the C19 carbon atom (Q19). These descriptors give information on the kind of interaction that can occur between the compounds and their respective biological receptor. The prediction study was done with a new set of ten derivative compounds by using the PCA, HCA, DA and KNN methods and only five of them were predicted as active against schistosomiasis.
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spelling A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis ActivityPM3neolignansanti-schistosomiasisprincipal component analysishierarchical cluster analysisdiscriminant analysisKth nearest neighborA set of eighteen neolignan derivative compounds with anti-schistosomiasis activity was studied by using the quantum mechanical semi-empirical method PM3 and other theoretical methods in order to calculate selected molecular properties (variables or descriptors) to be correlated to their biological activities. Exploratory data analysis (principal component analysis, PCA, and hierarchical cluster analysis, HCA), discriminant analysis (DA) and the Kth nearest neighbor (KNN) method were employed for obtaining possible relationships between the calculated descriptors and the biological activities studied and predicting the anti-schistosomiasis activity of new compounds from a test set. The molecular descriptors responsible for the separation between active and inactive compounds were: hydration energy (HE), molecular refractivity (MR) and charge on the C19 carbon atom (Q19). These descriptors give information on the kind of interaction that can occur between the compounds and their respective biological receptor. The prediction study was done with a new set of ten derivative compounds by using the PCA, HCA, DA and KNN methods and only five of them were predicted as active against schistosomiasis.Sociedade Brasileira de Química2002-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003Journal of the Brazilian Chemical Society v.13 n.3 2002reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.1590/S0103-50532002000300003info:eu-repo/semantics/openAccessAlves,Claúdio N.Macedo,Luiz G. M. deHonório,Káthia M.Camargo,Ademir J.Santos,Lourival S.Jardim,Iselino N.Barata,Lauro E. S.Silva,Albérico B. F. daeng2002-07-04T00:00:00Zoai:scielo:S0103-50532002000300003Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2002-07-04T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
title A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
spellingShingle A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
Alves,Claúdio N.
PM3
neolignans
anti-schistosomiasis
principal component analysis
hierarchical cluster analysis
discriminant analysis
Kth nearest neighbor
title_short A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
title_full A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
title_fullStr A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
title_full_unstemmed A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
title_sort A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
author Alves,Claúdio N.
author_facet Alves,Claúdio N.
Macedo,Luiz G. M. de
Honório,Káthia M.
Camargo,Ademir J.
Santos,Lourival S.
Jardim,Iselino N.
Barata,Lauro E. S.
Silva,Albérico B. F. da
author_role author
author2 Macedo,Luiz G. M. de
Honório,Káthia M.
Camargo,Ademir J.
Santos,Lourival S.
Jardim,Iselino N.
Barata,Lauro E. S.
Silva,Albérico B. F. da
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Alves,Claúdio N.
Macedo,Luiz G. M. de
Honório,Káthia M.
Camargo,Ademir J.
Santos,Lourival S.
Jardim,Iselino N.
Barata,Lauro E. S.
Silva,Albérico B. F. da
dc.subject.por.fl_str_mv PM3
neolignans
anti-schistosomiasis
principal component analysis
hierarchical cluster analysis
discriminant analysis
Kth nearest neighbor
topic PM3
neolignans
anti-schistosomiasis
principal component analysis
hierarchical cluster analysis
discriminant analysis
Kth nearest neighbor
description A set of eighteen neolignan derivative compounds with anti-schistosomiasis activity was studied by using the quantum mechanical semi-empirical method PM3 and other theoretical methods in order to calculate selected molecular properties (variables or descriptors) to be correlated to their biological activities. Exploratory data analysis (principal component analysis, PCA, and hierarchical cluster analysis, HCA), discriminant analysis (DA) and the Kth nearest neighbor (KNN) method were employed for obtaining possible relationships between the calculated descriptors and the biological activities studied and predicting the anti-schistosomiasis activity of new compounds from a test set. The molecular descriptors responsible for the separation between active and inactive compounds were: hydration energy (HE), molecular refractivity (MR) and charge on the C19 carbon atom (Q19). These descriptors give information on the kind of interaction that can occur between the compounds and their respective biological receptor. The prediction study was done with a new set of ten derivative compounds by using the PCA, HCA, DA and KNN methods and only five of them were predicted as active against schistosomiasis.
publishDate 2002
dc.date.none.fl_str_mv 2002-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-50532002000300003
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.13 n.3 2002
reponame:Journal of the Brazilian Chemical Society (Online)
instname:Sociedade Brasileira de Química (SBQ)
instacron:SBQ
instname_str Sociedade Brasileira de Química (SBQ)
instacron_str SBQ
institution SBQ
reponame_str Journal of the Brazilian Chemical Society (Online)
collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
repository.mail.fl_str_mv ||office@jbcs.sbq.org.br
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