A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity
Autor(a) principal: | |
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Data de Publicação: | 2002 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Journal of the Brazilian Chemical Society (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003 |
Resumo: | A set of eighteen neolignan derivative compounds with anti-schistosomiasis activity was studied by using the quantum mechanical semi-empirical method PM3 and other theoretical methods in order to calculate selected molecular properties (variables or descriptors) to be correlated to their biological activities. Exploratory data analysis (principal component analysis, PCA, and hierarchical cluster analysis, HCA), discriminant analysis (DA) and the Kth nearest neighbor (KNN) method were employed for obtaining possible relationships between the calculated descriptors and the biological activities studied and predicting the anti-schistosomiasis activity of new compounds from a test set. The molecular descriptors responsible for the separation between active and inactive compounds were: hydration energy (HE), molecular refractivity (MR) and charge on the C19 carbon atom (Q19). These descriptors give information on the kind of interaction that can occur between the compounds and their respective biological receptor. The prediction study was done with a new set of ten derivative compounds by using the PCA, HCA, DA and KNN methods and only five of them were predicted as active against schistosomiasis. |
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A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis ActivityPM3neolignansanti-schistosomiasisprincipal component analysishierarchical cluster analysisdiscriminant analysisKth nearest neighborA set of eighteen neolignan derivative compounds with anti-schistosomiasis activity was studied by using the quantum mechanical semi-empirical method PM3 and other theoretical methods in order to calculate selected molecular properties (variables or descriptors) to be correlated to their biological activities. Exploratory data analysis (principal component analysis, PCA, and hierarchical cluster analysis, HCA), discriminant analysis (DA) and the Kth nearest neighbor (KNN) method were employed for obtaining possible relationships between the calculated descriptors and the biological activities studied and predicting the anti-schistosomiasis activity of new compounds from a test set. The molecular descriptors responsible for the separation between active and inactive compounds were: hydration energy (HE), molecular refractivity (MR) and charge on the C19 carbon atom (Q19). These descriptors give information on the kind of interaction that can occur between the compounds and their respective biological receptor. The prediction study was done with a new set of ten derivative compounds by using the PCA, HCA, DA and KNN methods and only five of them were predicted as active against schistosomiasis.Sociedade Brasileira de Química2002-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003Journal of the Brazilian Chemical Society v.13 n.3 2002reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.1590/S0103-50532002000300003info:eu-repo/semantics/openAccessAlves,Claúdio N.Macedo,Luiz G. M. deHonório,Káthia M.Camargo,Ademir J.Santos,Lourival S.Jardim,Iselino N.Barata,Lauro E. S.Silva,Albérico B. F. daeng2002-07-04T00:00:00Zoai:scielo:S0103-50532002000300003Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2002-07-04T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false |
dc.title.none.fl_str_mv |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
title |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
spellingShingle |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity Alves,Claúdio N. PM3 neolignans anti-schistosomiasis principal component analysis hierarchical cluster analysis discriminant analysis Kth nearest neighbor |
title_short |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
title_full |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
title_fullStr |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
title_full_unstemmed |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
title_sort |
A Structure-Activity Relationship (SAR) Study of Neolignan Compounds with Anti-schistosomiasis Activity |
author |
Alves,Claúdio N. |
author_facet |
Alves,Claúdio N. Macedo,Luiz G. M. de Honório,Káthia M. Camargo,Ademir J. Santos,Lourival S. Jardim,Iselino N. Barata,Lauro E. S. Silva,Albérico B. F. da |
author_role |
author |
author2 |
Macedo,Luiz G. M. de Honório,Káthia M. Camargo,Ademir J. Santos,Lourival S. Jardim,Iselino N. Barata,Lauro E. S. Silva,Albérico B. F. da |
author2_role |
author author author author author author author |
dc.contributor.author.fl_str_mv |
Alves,Claúdio N. Macedo,Luiz G. M. de Honório,Káthia M. Camargo,Ademir J. Santos,Lourival S. Jardim,Iselino N. Barata,Lauro E. S. Silva,Albérico B. F. da |
dc.subject.por.fl_str_mv |
PM3 neolignans anti-schistosomiasis principal component analysis hierarchical cluster analysis discriminant analysis Kth nearest neighbor |
topic |
PM3 neolignans anti-schistosomiasis principal component analysis hierarchical cluster analysis discriminant analysis Kth nearest neighbor |
description |
A set of eighteen neolignan derivative compounds with anti-schistosomiasis activity was studied by using the quantum mechanical semi-empirical method PM3 and other theoretical methods in order to calculate selected molecular properties (variables or descriptors) to be correlated to their biological activities. Exploratory data analysis (principal component analysis, PCA, and hierarchical cluster analysis, HCA), discriminant analysis (DA) and the Kth nearest neighbor (KNN) method were employed for obtaining possible relationships between the calculated descriptors and the biological activities studied and predicting the anti-schistosomiasis activity of new compounds from a test set. The molecular descriptors responsible for the separation between active and inactive compounds were: hydration energy (HE), molecular refractivity (MR) and charge on the C19 carbon atom (Q19). These descriptors give information on the kind of interaction that can occur between the compounds and their respective biological receptor. The prediction study was done with a new set of ten derivative compounds by using the PCA, HCA, DA and KNN methods and only five of them were predicted as active against schistosomiasis. |
publishDate |
2002 |
dc.date.none.fl_str_mv |
2002-06-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532002000300003 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0103-50532002000300003 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
dc.source.none.fl_str_mv |
Journal of the Brazilian Chemical Society v.13 n.3 2002 reponame:Journal of the Brazilian Chemical Society (Online) instname:Sociedade Brasileira de Química (SBQ) instacron:SBQ |
instname_str |
Sociedade Brasileira de Química (SBQ) |
instacron_str |
SBQ |
institution |
SBQ |
reponame_str |
Journal of the Brazilian Chemical Society (Online) |
collection |
Journal of the Brazilian Chemical Society (Online) |
repository.name.fl_str_mv |
Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ) |
repository.mail.fl_str_mv |
||office@jbcs.sbq.org.br |
_version_ |
1750318164631093248 |