Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability
Autor(a) principal: | |
---|---|
Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Journal of the Brazilian Chemical Society (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465 |
Resumo: | The actinobacteria Streptomyces wadayamensis A23, an endophitic strain, was recently sequenced and previous work showed qualitatively that the strain inhibits the growth of some pathogens. Herein we report the genome analysis of S. wadayamensis which reveals several antibiotic biosynthetic pathways. Using mass spectrometry, we were able to identify desferoxamines, several antimycins and candicidin, as predicted. Additionally, it was possible to confirm that the biosynthetic machinery of the strain when compared to identified known metabolites is far underestimated. As suggested by biochemical qualitative tests, genome encoded information reveals that the strain A23 has high capability to produce antibiotics. |
id |
SBQ-2_b4992cfc60b409ea569f1948a9bf1429 |
---|---|
oai_identifier_str |
oai:scielo:S0103-50532016000801465 |
network_acronym_str |
SBQ-2 |
network_name_str |
Journal of the Brazilian Chemical Society (Online) |
repository_id_str |
|
spelling |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capabilitygenome sequencinggenome miningmolecular networkingStreptomycesantibiotic activityThe actinobacteria Streptomyces wadayamensis A23, an endophitic strain, was recently sequenced and previous work showed qualitatively that the strain inhibits the growth of some pathogens. Herein we report the genome analysis of S. wadayamensis which reveals several antibiotic biosynthetic pathways. Using mass spectrometry, we were able to identify desferoxamines, several antimycins and candicidin, as predicted. Additionally, it was possible to confirm that the biosynthetic machinery of the strain when compared to identified known metabolites is far underestimated. As suggested by biochemical qualitative tests, genome encoded information reveals that the strain A23 has high capability to produce antibiotics.Sociedade Brasileira de Química2016-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465Journal of the Brazilian Chemical Society v.27 n.8 2016reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.5935/0103-5053.20160180info:eu-repo/semantics/openAccessAngolini,Célio F. F.Gonçalves,Ana B.Sigrist,RenataPaulo,Bruno S.Samborskyy,MarkiyanCruz,Pedro L. R.Vivian,Adriana F.Schmidt,Eduardo M.Eberlin,Marcos N.Araújo,Welington L.Oliveira,Luciana G. deeng2016-08-19T00:00:00Zoai:scielo:S0103-50532016000801465Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2016-08-19T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false |
dc.title.none.fl_str_mv |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
title |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
spellingShingle |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability Angolini,Célio F. F. genome sequencing genome mining molecular networking Streptomyces antibiotic activity |
title_short |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
title_full |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
title_fullStr |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
title_full_unstemmed |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
title_sort |
Genome Mining of Endophytic Streptomyces wadayamensis Reveals High Antibiotic Production Capability |
author |
Angolini,Célio F. F. |
author_facet |
Angolini,Célio F. F. Gonçalves,Ana B. Sigrist,Renata Paulo,Bruno S. Samborskyy,Markiyan Cruz,Pedro L. R. Vivian,Adriana F. Schmidt,Eduardo M. Eberlin,Marcos N. Araújo,Welington L. Oliveira,Luciana G. de |
author_role |
author |
author2 |
Gonçalves,Ana B. Sigrist,Renata Paulo,Bruno S. Samborskyy,Markiyan Cruz,Pedro L. R. Vivian,Adriana F. Schmidt,Eduardo M. Eberlin,Marcos N. Araújo,Welington L. Oliveira,Luciana G. de |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Angolini,Célio F. F. Gonçalves,Ana B. Sigrist,Renata Paulo,Bruno S. Samborskyy,Markiyan Cruz,Pedro L. R. Vivian,Adriana F. Schmidt,Eduardo M. Eberlin,Marcos N. Araújo,Welington L. Oliveira,Luciana G. de |
dc.subject.por.fl_str_mv |
genome sequencing genome mining molecular networking Streptomyces antibiotic activity |
topic |
genome sequencing genome mining molecular networking Streptomyces antibiotic activity |
description |
The actinobacteria Streptomyces wadayamensis A23, an endophitic strain, was recently sequenced and previous work showed qualitatively that the strain inhibits the growth of some pathogens. Herein we report the genome analysis of S. wadayamensis which reveals several antibiotic biosynthetic pathways. Using mass spectrometry, we were able to identify desferoxamines, several antimycins and candicidin, as predicted. Additionally, it was possible to confirm that the biosynthetic machinery of the strain when compared to identified known metabolites is far underestimated. As suggested by biochemical qualitative tests, genome encoded information reveals that the strain A23 has high capability to produce antibiotics. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-08-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532016000801465 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.5935/0103-5053.20160180 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
dc.source.none.fl_str_mv |
Journal of the Brazilian Chemical Society v.27 n.8 2016 reponame:Journal of the Brazilian Chemical Society (Online) instname:Sociedade Brasileira de Química (SBQ) instacron:SBQ |
instname_str |
Sociedade Brasileira de Química (SBQ) |
instacron_str |
SBQ |
institution |
SBQ |
reponame_str |
Journal of the Brazilian Chemical Society (Online) |
collection |
Journal of the Brazilian Chemical Society (Online) |
repository.name.fl_str_mv |
Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ) |
repository.mail.fl_str_mv |
||office@jbcs.sbq.org.br |
_version_ |
1750318178695643136 |