Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais

Detalhes bibliográficos
Autor(a) principal: Policastro, Lucca Rocha
Data de Publicação: 2022
Tipo de documento: Trabalho de conclusão de curso
Idioma: por
Título da fonte: Repositório Institucional da UFSCAR
Texto Completo: https://repositorio.ufscar.br/handle/ufscar/15964
Resumo: Chikungunya virus (CHIKV), which causes Chikungunya fever, is a arbovirus transmitted by the Aedes aegypti mosquito, which periodically causes epidemics around the world and can become a serious public health problem. However, there are no approved vaccines or drugs against CHIKV. So it's research to identify antivirals is fundamental, which can be carried out in a quickly and efficiently by high-throughput screening (HTS) assays, such as replicon-based assays. These are subgenomic systems in which genes encoding structural proteins are replaced by a reporter gene, allowing the identification of inhibitors of viral replication by measuring the activity of the reporter protein, in an easier and safer than traditional methods. In this study, the replicon strain was used. CHIKV reporter that contains the Gaussia luciferase (GLuc) gene as a reporter, called BHK-21-Rep-T7-GLuc-nSP-CHIKV-99650, for the screening of three MMV/DNDi small molecule libraries. Through tests based on replicon it was possible to identify 4 compounds, Itraconazole, GSK-983, Rubitecan and MMV676270, as inhibitors of CHIKV replication with low to moderate toxicity. Two of these molecules, the antifungal Itraconazole and the antiviral Rubitecan, were the most promising with selectivity indices >312.5 and >714.3, respectively, values considerably higher than those observed for the too much. In addition, the inhibition of replication was confirmed by the decrease in relative expression of the replicon RNA in cells treated with the concentrations effects of the 4 compounds. To better characterize the activity of these molecules against CHIKV, viral infection assays will be carried out in collaboration with Prof. Ana Carolina Jardim from the Federal University of Uberlândia (UFU).
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spelling Policastro, Lucca RochaFernandes, Rafaela Sachettohttp://lattes.cnpq.br/2580624711278661Anibal, Fernanda de Freitashttp://lattes.cnpq.br/491826196877280644c91d54-30f5-47d4-8dd9-5274054cb9242022-05-02T20:48:14Z2022-05-02T20:48:14Z2022-04-12POLICASTRO, Lucca Rocha. Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais. 2022. Trabalho de Conclusão de Curso (Graduação em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2022. Disponível em: https://repositorio.ufscar.br/handle/ufscar/15964.https://repositorio.ufscar.br/handle/ufscar/15964Chikungunya virus (CHIKV), which causes Chikungunya fever, is a arbovirus transmitted by the Aedes aegypti mosquito, which periodically causes epidemics around the world and can become a serious public health problem. However, there are no approved vaccines or drugs against CHIKV. So it's research to identify antivirals is fundamental, which can be carried out in a quickly and efficiently by high-throughput screening (HTS) assays, such as replicon-based assays. These are subgenomic systems in which genes encoding structural proteins are replaced by a reporter gene, allowing the identification of inhibitors of viral replication by measuring the activity of the reporter protein, in an easier and safer than traditional methods. In this study, the replicon strain was used. CHIKV reporter that contains the Gaussia luciferase (GLuc) gene as a reporter, called BHK-21-Rep-T7-GLuc-nSP-CHIKV-99650, for the screening of three MMV/DNDi small molecule libraries. Through tests based on replicon it was possible to identify 4 compounds, Itraconazole, GSK-983, Rubitecan and MMV676270, as inhibitors of CHIKV replication with low to moderate toxicity. Two of these molecules, the antifungal Itraconazole and the antiviral Rubitecan, were the most promising with selectivity indices >312.5 and >714.3, respectively, values considerably higher than those observed for the too much. In addition, the inhibition of replication was confirmed by the decrease in relative expression of the replicon RNA in cells treated with the concentrations effects of the 4 compounds. To better characterize the activity of these molecules against CHIKV, viral infection assays will be carried out in collaboration with Prof. Ana Carolina Jardim from the Federal University of Uberlândia (UFU).O vírus Chikungunya (CHIKV), causador da febre Chikungunya, é um arbovírus transmitido pelo mosquito Aedes aegypti, que periodicamente provoca epidemias ao redor do mundo, podendo se tornar um sério problema de saúde pública. Entretanto, não existem vacinas ou fármacos aprovados contra o CHIKV. Portanto, é fundamental a pesquisa para identificação de antivirais, a qual pode ser realizada de maneira rápida e eficiente por ensaios em modo de triagem de alta performance (highthroughput screening, HTS), como os ensaios baseados em replicon. Estes são sistemas subgenômicos nos quais os genes codificadores das proteínas estruturais são substituídos por um gene repórter, permitindo a identificação de inibidores da replicação viral medindo-se a atividade da proteína repórter, de maneira mais fácil e segura do que os métodos tradicionais. Neste estudo, foi utilizada a linhagem replicon repórter de CHIKV que contém o gene da Gaussia luciferase (GLuc) como repórter, denominada BHK-21-Rep-T7-GLuc-nSP-CHIKV-99650, para a triagem de três bibliotecas de pequenas moléculas do MMV/DNDi. Através dos ensaios baseados em replicon foi possível identificar 4 compostos, Itraconazol, GSK-983, Rubitecan e MMV676270, como inibidores da replicação do CHIKV com baixa a moderada toxicidade. Duas destas moléculas, o antifúngico Itraconazol e o antiviral Rubitecan, foram as mais promissoras com índices de seletividade >312,5 e >714,3, respectivamente, valores consideravelmente maiores do que o observado para os demais. Além disso, a inibição da replicação foi confirmada pela diminuição da expressão relativa do RNA replicon em células tratadas com as concentrações efetivas dos 4 compostos. Para melhor caracterizar atividade destas moléculas contra o CHIKV, ensaios de infecção viral serão realizados em colaboração com a Profa. Ana Carolina Jardim da Universidade Federal de Uberlândia (UFU).Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)2021/01706-0porUniversidade Federal de São CarlosCâmpus São CarlosBiotecnologia - BiotecUFSCarAttribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAlfavírusArbovirosesEnsaios celularesDescoberta de drogasChikungunyaRepliconCIENCIAS BIOLOGICAS::GENETICAEnsaios celulares baseados em replicon de Chikungunya para identificação de antiviraisChikungunya replicon-based cell assays for antiviral identificationinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/bachelorThesis6006001a6ee24d-c5f4-4aa1-ac4d-cf987c1aa5b8reponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINALTCC - Lucca Rocha Policastro.pdfTCC - Lucca Rocha Policastro.pdfTCC originalapplication/pdf578309https://repositorio.ufscar.br/bitstream/ufscar/15964/3/TCC%20-%20Lucca%20Rocha%20Policastro.pdfa52ebfec4df68f7f28d78ac6c574a873MD53CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8811https://repositorio.ufscar.br/bitstream/ufscar/15964/4/license_rdfe39d27027a6cc9cb039ad269a5db8e34MD54TEXTTCC - Lucca Rocha Policastro.pdf.txtTCC - Lucca Rocha Policastro.pdf.txtExtracted texttext/plain49392https://repositorio.ufscar.br/bitstream/ufscar/15964/5/TCC%20-%20Lucca%20Rocha%20Policastro.pdf.txt355e436c5c7aeefd26e48b2061b4c8afMD55THUMBNAILTCC - Lucca Rocha Policastro.pdf.jpgTCC - Lucca Rocha Policastro.pdf.jpgIM Thumbnailimage/jpeg5239https://repositorio.ufscar.br/bitstream/ufscar/15964/6/TCC%20-%20Lucca%20Rocha%20Policastro.pdf.jpg9b76789726459cc1787af378d702bbc8MD56ufscar/159642023-09-18 18:32:20.861oai:repositorio.ufscar.br:ufscar/15964Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:32:20Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false
dc.title.por.fl_str_mv Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
dc.title.alternative.eng.fl_str_mv Chikungunya replicon-based cell assays for antiviral identification
title Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
spellingShingle Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
Policastro, Lucca Rocha
Alfavírus
Arboviroses
Ensaios celulares
Descoberta de drogas
Chikungunya
Replicon
CIENCIAS BIOLOGICAS::GENETICA
title_short Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
title_full Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
title_fullStr Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
title_full_unstemmed Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
title_sort Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais
author Policastro, Lucca Rocha
author_facet Policastro, Lucca Rocha
author_role author
dc.contributor.author.fl_str_mv Policastro, Lucca Rocha
dc.contributor.advisor1.fl_str_mv Fernandes, Rafaela Sachetto
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/2580624711278661
dc.contributor.advisor-co1.fl_str_mv Anibal, Fernanda de Freitas
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/4918261968772806
dc.contributor.authorID.fl_str_mv 44c91d54-30f5-47d4-8dd9-5274054cb924
contributor_str_mv Fernandes, Rafaela Sachetto
Anibal, Fernanda de Freitas
dc.subject.por.fl_str_mv Alfavírus
Arboviroses
Ensaios celulares
Descoberta de drogas
topic Alfavírus
Arboviroses
Ensaios celulares
Descoberta de drogas
Chikungunya
Replicon
CIENCIAS BIOLOGICAS::GENETICA
dc.subject.eng.fl_str_mv Chikungunya
Replicon
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::GENETICA
description Chikungunya virus (CHIKV), which causes Chikungunya fever, is a arbovirus transmitted by the Aedes aegypti mosquito, which periodically causes epidemics around the world and can become a serious public health problem. However, there are no approved vaccines or drugs against CHIKV. So it's research to identify antivirals is fundamental, which can be carried out in a quickly and efficiently by high-throughput screening (HTS) assays, such as replicon-based assays. These are subgenomic systems in which genes encoding structural proteins are replaced by a reporter gene, allowing the identification of inhibitors of viral replication by measuring the activity of the reporter protein, in an easier and safer than traditional methods. In this study, the replicon strain was used. CHIKV reporter that contains the Gaussia luciferase (GLuc) gene as a reporter, called BHK-21-Rep-T7-GLuc-nSP-CHIKV-99650, for the screening of three MMV/DNDi small molecule libraries. Through tests based on replicon it was possible to identify 4 compounds, Itraconazole, GSK-983, Rubitecan and MMV676270, as inhibitors of CHIKV replication with low to moderate toxicity. Two of these molecules, the antifungal Itraconazole and the antiviral Rubitecan, were the most promising with selectivity indices >312.5 and >714.3, respectively, values considerably higher than those observed for the too much. In addition, the inhibition of replication was confirmed by the decrease in relative expression of the replicon RNA in cells treated with the concentrations effects of the 4 compounds. To better characterize the activity of these molecules against CHIKV, viral infection assays will be carried out in collaboration with Prof. Ana Carolina Jardim from the Federal University of Uberlândia (UFU).
publishDate 2022
dc.date.accessioned.fl_str_mv 2022-05-02T20:48:14Z
dc.date.available.fl_str_mv 2022-05-02T20:48:14Z
dc.date.issued.fl_str_mv 2022-04-12
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dc.identifier.citation.fl_str_mv POLICASTRO, Lucca Rocha. Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais. 2022. Trabalho de Conclusão de Curso (Graduação em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2022. Disponível em: https://repositorio.ufscar.br/handle/ufscar/15964.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/ufscar/15964
identifier_str_mv POLICASTRO, Lucca Rocha. Ensaios celulares baseados em replicon de Chikungunya para identificação de antivirais. 2022. Trabalho de Conclusão de Curso (Graduação em Biotecnologia) – Universidade Federal de São Carlos, São Carlos, 2022. Disponível em: https://repositorio.ufscar.br/handle/ufscar/15964.
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http://creativecommons.org/licenses/by-nc-nd/3.0/br/
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dc.publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
Biotecnologia - Biotec
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publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
Biotecnologia - Biotec
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