Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri
Autor(a) principal: | |
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Data de Publicação: | 2009 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFSCAR |
Texto Completo: | https://repositorio.ufscar.br/handle/ufscar/6956 |
Resumo: | The citrus canker disease is caused by a phytopathogenic bacterium Xanthomonas citri ssp. citri (Xac). The common symptoms are defoliation, twig die-back and premature fruit drop. The infection process of this bacterium is not totally elucidated although it has been reported that peptidases are involved in the infection and virulence process. The genome sequencing of the bacterium Xanthomonas citri ssp. citri enabled the detection of a gene that encodes an enzyme cysteine peptidase like, possibly involved in infection. Aiming to characterize this enzyme and determine its possible involvement in the infection process were performed: expression in recombinant Pichia pastoris, purification of protein and enzyme studies for characterization were done. The kinetic characterization of recombinant enzyme was performed through the hydrolysis of synthetic substrates Z-Leu-Arg-MCA and Z-Phe-Arg-MCA (Z = Carbobenzoxy; MCA = 7-amido-4-methylcoumarin), as well as the use of substrates with intramolecular fluorescence suppression AbzKVRSSKQEDDnp, AbzKLRSSKQ-EDDnp and AbzKIRSSKQ-EDDnp (ABZ = Ortoaminobenzoic acid; EDDnp = Ethylene diamine [2,4-dinitrophenyl]). The best catalytic efficiency (Kcat/Km) of the enzyme was found using the substrate AbzKIRSSKQ-EDDnp that has a isoleucine residue at position P2, showing that the recombinant enzyme (HISCPXAC) prefer aliphatic amino acid residue in this position. Inhibitory experiments of enzyme activity were performed using different cysteine peptidase inhibitors including CaneCPI-1, CaneCPI-2, CaneCPI-3, CaneCPI-4 and E-64 (L- transepoxysuccinyl-leucylamido-[4- guanidino]butane), resulting in a constant of inhibition (Ki) of 84.64, 0.088, 0.10, 0.012 and 1.214 nM respectively. The polyclonal antibody anti- HISCPXAC was produced in mouse and Western blotting analysis revealed that the antibody was able to recognize the recombinant purified cysteine peptidase and also the native cysteine peptidase from Xanthomonas citri ssp. citri strain 306 cultivated in media inductor of pathogenicity. The same antibody did not recognize the protein in a Xac knockout strain for the cysteine peptidase gene. Our results suggest that the cysteine peptidase from Xanthomonas citri ssp. citri may be involved in the bacteria infection and/or virulence. |
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Silveira, Rosseli Santos daSilva, Flávio Henrique dahttp://lattes.cnpq.br/1757309852446263http://lattes.cnpq.br/99633824953549165ce9a2ea-8909-4a70-b8b3-8039d2f0824b2016-08-17T18:39:32Z2009-12-142016-08-17T18:39:32Z2009-04-29SILVEIRA, Rosseli Santos da. Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri. 2009. 105 f. Dissertação (Mestrado em Multidisciplinar) - Universidade Federal de São Carlos, São Carlos, 2009.https://repositorio.ufscar.br/handle/ufscar/6956The citrus canker disease is caused by a phytopathogenic bacterium Xanthomonas citri ssp. citri (Xac). The common symptoms are defoliation, twig die-back and premature fruit drop. The infection process of this bacterium is not totally elucidated although it has been reported that peptidases are involved in the infection and virulence process. The genome sequencing of the bacterium Xanthomonas citri ssp. citri enabled the detection of a gene that encodes an enzyme cysteine peptidase like, possibly involved in infection. Aiming to characterize this enzyme and determine its possible involvement in the infection process were performed: expression in recombinant Pichia pastoris, purification of protein and enzyme studies for characterization were done. The kinetic characterization of recombinant enzyme was performed through the hydrolysis of synthetic substrates Z-Leu-Arg-MCA and Z-Phe-Arg-MCA (Z = Carbobenzoxy; MCA = 7-amido-4-methylcoumarin), as well as the use of substrates with intramolecular fluorescence suppression AbzKVRSSKQEDDnp, AbzKLRSSKQ-EDDnp and AbzKIRSSKQ-EDDnp (ABZ = Ortoaminobenzoic acid; EDDnp = Ethylene diamine [2,4-dinitrophenyl]). The best catalytic efficiency (Kcat/Km) of the enzyme was found using the substrate AbzKIRSSKQ-EDDnp that has a isoleucine residue at position P2, showing that the recombinant enzyme (HISCPXAC) prefer aliphatic amino acid residue in this position. Inhibitory experiments of enzyme activity were performed using different cysteine peptidase inhibitors including CaneCPI-1, CaneCPI-2, CaneCPI-3, CaneCPI-4 and E-64 (L- transepoxysuccinyl-leucylamido-[4- guanidino]butane), resulting in a constant of inhibition (Ki) of 84.64, 0.088, 0.10, 0.012 and 1.214 nM respectively. The polyclonal antibody anti- HISCPXAC was produced in mouse and Western blotting analysis revealed that the antibody was able to recognize the recombinant purified cysteine peptidase and also the native cysteine peptidase from Xanthomonas citri ssp. citri strain 306 cultivated in media inductor of pathogenicity. The same antibody did not recognize the protein in a Xac knockout strain for the cysteine peptidase gene. Our results suggest that the cysteine peptidase from Xanthomonas citri ssp. citri may be involved in the bacteria infection and/or virulence.Uma das doenças que afeta a citricultura é o cancro cítrico, causada pela bactéria fitopatogênica Xanthomonas citri subsp. citri (Xac). Os sintomas mais comuns desta doença são a desfolhamento, morte dos galhos e queda prematura dos frutos. O processo de infecção dessa bactéria não foi totalmente elucidado, porém, já existem relatos do envolvimento de peptidases no processo de infecção e virulência. O seqüenciamento do genoma da bactéria Xanthomonas citri subsp. citri, possibilitou a detecção de um gene que codifica uma enzima do tipo cisteíno peptidase, possivelmente envolvida no processo de infecção. Com o objetivo de caracterizar esta enzima e verificar seu possível envolvimento no processo de infecção foram realizadas: a expressão recombinante em Pichia pastoris, purificação da proteína e estudos de caracterização enzimática. A caracterização cinética da enzima recombinante foi realizada, por meio da hidrólise dos substratos sintéticos Z-Leu-Arg-MCA e Z-Phe-Arg-MCA (Z= Carbobenzoxicarbonil; MCA= 7-amino-4-metil-coumarina), assim como dos substratos com supressão intramolecular de fluorescência AbzKVRSSKQ-EDDnp, AbzKLRSSKQ-EDDnp e AbzKIRSSKQ-EDDnp (Abz= ácido orto-amino benzóico; EDDnp= N-[2,4-dinitrofenil]-etilenodiamino). A melhor eficiência catalítica (Kcat/Km) da enzima foi verificada com o uso do substrato AbzKIRSSKQ-EDDnp, o qual possui um resíduo de isoleucina na posição P2, indicando que a enzima recombinante (HISCPXAC) tem uma preferência por resíduos de aminoácidos alifáticos nesta posição. Foram realizados também experimentos de inibição da atividade enzimática com diferentes inibidores de cisteíno peptidases incluindo CaneCPI-1, CaneCPI-2, CaneCPI-3, CaneCPI-4 e E-64 (transepoxi-succinil-L-leucilamido-(4-guanidino) butano), resultando nas constantes de inibição (Ki) de 84.64, 0.088, 0.10, 0.012 e 1.214 nM, respectivamente. Além disso, foram produzidos anticorpos policlonais anti-HISCPXAC e análises de Western blotting revelaram que esse anticorpo reconheceu a cisteíno peptidase recombinante purificada e também a cisteíno peptidase nativa de Xanthomonas citri subsp. citri cepa 306 cultivada em meio indutor de patogenicidade. Os mesmos anticorpos não foram capazes de reconhecer a proteína em uma cepa de Xac que possui o gene da cisteíno peptidase interrompido (knockout), a qual, em estudos anteriores, se mostrou ser menos virulenta que a Xac 306. Os presentes resultados sugerem que a cisteíno peptidase em estudo pode estar envolvida no processo de infecção e/ou virulência de Xanthomonas citri subsp. citri.Fundo Paulista de Defesa da Citriculturaapplication/pdfporUniversidade Federal de São CarlosPrograma de Pós-Graduação em Biotecnologia - PPGBiotecUFSCarBRBiotecnologiaCancro cítricoCisteíno peptidasePichia pastorisCaracterização enzimáticaOUTROSProdução recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citriinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-1-1e2c04fa9-1e62-4316-915c-35a38d859aaeinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINAL2709.pdfapplication/pdf3171268https://repositorio.ufscar.br/bitstream/ufscar/6956/1/2709.pdf320be443904ef1fb906616e8df53a4ebMD51TEXT2709.pdf.txt2709.pdf.txtExtracted texttext/plain144881https://repositorio.ufscar.br/bitstream/ufscar/6956/2/2709.pdf.txt76118c94b158375e18cbe4748eda6071MD52THUMBNAIL2709.pdf.jpg2709.pdf.jpgIM Thumbnailimage/jpeg6482https://repositorio.ufscar.br/bitstream/ufscar/6956/3/2709.pdf.jpgc73e50685a23b7aa0f54f152d21a1119MD53ufscar/69562023-09-18 18:30:33.605oai:repositorio.ufscar.br:ufscar/6956Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:30:33Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false |
dc.title.por.fl_str_mv |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
title |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
spellingShingle |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri Silveira, Rosseli Santos da Biotecnologia Cancro cítrico Cisteíno peptidase Pichia pastoris Caracterização enzimática OUTROS |
title_short |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
title_full |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
title_fullStr |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
title_full_unstemmed |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
title_sort |
Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri |
author |
Silveira, Rosseli Santos da |
author_facet |
Silveira, Rosseli Santos da |
author_role |
author |
dc.contributor.authorlattes.por.fl_str_mv |
http://lattes.cnpq.br/9963382495354916 |
dc.contributor.author.fl_str_mv |
Silveira, Rosseli Santos da |
dc.contributor.advisor1.fl_str_mv |
Silva, Flávio Henrique da |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/1757309852446263 |
dc.contributor.authorID.fl_str_mv |
5ce9a2ea-8909-4a70-b8b3-8039d2f0824b |
contributor_str_mv |
Silva, Flávio Henrique da |
dc.subject.por.fl_str_mv |
Biotecnologia Cancro cítrico Cisteíno peptidase Pichia pastoris Caracterização enzimática |
topic |
Biotecnologia Cancro cítrico Cisteíno peptidase Pichia pastoris Caracterização enzimática OUTROS |
dc.subject.cnpq.fl_str_mv |
OUTROS |
description |
The citrus canker disease is caused by a phytopathogenic bacterium Xanthomonas citri ssp. citri (Xac). The common symptoms are defoliation, twig die-back and premature fruit drop. The infection process of this bacterium is not totally elucidated although it has been reported that peptidases are involved in the infection and virulence process. The genome sequencing of the bacterium Xanthomonas citri ssp. citri enabled the detection of a gene that encodes an enzyme cysteine peptidase like, possibly involved in infection. Aiming to characterize this enzyme and determine its possible involvement in the infection process were performed: expression in recombinant Pichia pastoris, purification of protein and enzyme studies for characterization were done. The kinetic characterization of recombinant enzyme was performed through the hydrolysis of synthetic substrates Z-Leu-Arg-MCA and Z-Phe-Arg-MCA (Z = Carbobenzoxy; MCA = 7-amido-4-methylcoumarin), as well as the use of substrates with intramolecular fluorescence suppression AbzKVRSSKQEDDnp, AbzKLRSSKQ-EDDnp and AbzKIRSSKQ-EDDnp (ABZ = Ortoaminobenzoic acid; EDDnp = Ethylene diamine [2,4-dinitrophenyl]). The best catalytic efficiency (Kcat/Km) of the enzyme was found using the substrate AbzKIRSSKQ-EDDnp that has a isoleucine residue at position P2, showing that the recombinant enzyme (HISCPXAC) prefer aliphatic amino acid residue in this position. Inhibitory experiments of enzyme activity were performed using different cysteine peptidase inhibitors including CaneCPI-1, CaneCPI-2, CaneCPI-3, CaneCPI-4 and E-64 (L- transepoxysuccinyl-leucylamido-[4- guanidino]butane), resulting in a constant of inhibition (Ki) of 84.64, 0.088, 0.10, 0.012 and 1.214 nM respectively. The polyclonal antibody anti- HISCPXAC was produced in mouse and Western blotting analysis revealed that the antibody was able to recognize the recombinant purified cysteine peptidase and also the native cysteine peptidase from Xanthomonas citri ssp. citri strain 306 cultivated in media inductor of pathogenicity. The same antibody did not recognize the protein in a Xac knockout strain for the cysteine peptidase gene. Our results suggest that the cysteine peptidase from Xanthomonas citri ssp. citri may be involved in the bacteria infection and/or virulence. |
publishDate |
2009 |
dc.date.available.fl_str_mv |
2009-12-14 2016-08-17T18:39:32Z |
dc.date.issued.fl_str_mv |
2009-04-29 |
dc.date.accessioned.fl_str_mv |
2016-08-17T18:39:32Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/masterThesis |
format |
masterThesis |
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publishedVersion |
dc.identifier.citation.fl_str_mv |
SILVEIRA, Rosseli Santos da. Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri. 2009. 105 f. Dissertação (Mestrado em Multidisciplinar) - Universidade Federal de São Carlos, São Carlos, 2009. |
dc.identifier.uri.fl_str_mv |
https://repositorio.ufscar.br/handle/ufscar/6956 |
identifier_str_mv |
SILVEIRA, Rosseli Santos da. Produção recombinante e estudos funcionais de uma cisteíno peptidase de Xanthomonas citri subspécie citri. 2009. 105 f. Dissertação (Mestrado em Multidisciplinar) - Universidade Federal de São Carlos, São Carlos, 2009. |
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https://repositorio.ufscar.br/handle/ufscar/6956 |
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openAccess |
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Universidade Federal de São Carlos |
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BR |
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