Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades

Detalhes bibliográficos
Autor(a) principal: Gusmão, Eriosvaldo Florentino
Data de Publicação: 2015
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFSCAR
Texto Completo: https://repositorio.ufscar.br/handle/ufscar/7410
Resumo: Carbone nanotubes (CNT) have been widely investigated both experimentally and theoretically because their remarkable geometry and physical-chemical properties, in regard especially of their possible applications as either reactors or catalysts of physical and chemical processes. This study computationally investigated the interaction between the symmetry cavity of chiral nanotubes and the symmetry of chiral molecules. It was selected CNT cavities capable of comporting peptides made of twenty amino acids residues or more and the simulations have been performed with CNTpeptide interaction in vacuum and in implicit solvent (water). Simulations of the interaction of CNT cavity with γ-valerolactone (GVL) racemic mixture were also performed, since they made it possible to evaluate the capacity of being enriched with one of the enantiomers beared by the chiral cavity when merged in liquid. The CNT-peptide interaction models demonstrated that there is competition of interactions, and the self-stabilization caused by strong intramolecular forces reduces the capacity of these peptides to interact selectively with the cavity, what makes it difficult to affirm, until present, whether there is or not cavity sensitivity to some of the isomers. Although the CNT-GVL model of energies interaction did not show selectivity capacity, the analysis of the radial distribution functions curves of GVL pairs of isomers in relation to the CNT center of masses and in relation to the CNT atoms truly demonstrate that there is chiral enrichment capacity in the case of these cavities. Generally, it was verified that the chiral recognition and enrichment are stemmed of subtle interactions, therefore there is still the necessity of expanding and deepening these investigations since the CNT are very promising chiral cavities.
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spelling Gusmão, Eriosvaldo FlorentinoMoura, André Farias dehttp://lattes.cnpq.br/0746428641961163Freitas, Luiz Carlos Gomidehttp://lattes.cnpq.br/60781695166809771ab023bf-583b-4c23-b838-1bf7d02963972016-09-23T18:35:18Z2016-09-23T18:35:18Z2015-08-07GUSMÃO, Eriosvaldo Florentino. Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades. 2015. Dissertação (Mestrado em Química) – Universidade Federal de São Carlos, São Carlos, 2015. Disponível em: https://repositorio.ufscar.br/handle/ufscar/7410.https://repositorio.ufscar.br/handle/ufscar/7410Carbone nanotubes (CNT) have been widely investigated both experimentally and theoretically because their remarkable geometry and physical-chemical properties, in regard especially of their possible applications as either reactors or catalysts of physical and chemical processes. This study computationally investigated the interaction between the symmetry cavity of chiral nanotubes and the symmetry of chiral molecules. It was selected CNT cavities capable of comporting peptides made of twenty amino acids residues or more and the simulations have been performed with CNTpeptide interaction in vacuum and in implicit solvent (water). Simulations of the interaction of CNT cavity with γ-valerolactone (GVL) racemic mixture were also performed, since they made it possible to evaluate the capacity of being enriched with one of the enantiomers beared by the chiral cavity when merged in liquid. The CNT-peptide interaction models demonstrated that there is competition of interactions, and the self-stabilization caused by strong intramolecular forces reduces the capacity of these peptides to interact selectively with the cavity, what makes it difficult to affirm, until present, whether there is or not cavity sensitivity to some of the isomers. Although the CNT-GVL model of energies interaction did not show selectivity capacity, the analysis of the radial distribution functions curves of GVL pairs of isomers in relation to the CNT center of masses and in relation to the CNT atoms truly demonstrate that there is chiral enrichment capacity in the case of these cavities. Generally, it was verified that the chiral recognition and enrichment are stemmed of subtle interactions, therefore there is still the necessity of expanding and deepening these investigations since the CNT are very promising chiral cavities.Nanotubos de carbono (CNT) têm sido largamente estudados tanto experimentalmente como teoricamente, pois sua geometria e suas propriedades físicas e químicas são marcantes, ainda mais no que concerne às suas possíveis aplicações como reatores e/ou catalizadores de processos físico e químicos. Este estudo investigou computacionalmente a interação entre a simetria da cavidade de nanotubos quirais e a simetria de moléculas quirais. Foram selecionadas cavidades de CNTs capazes de comportar peptídeos com vinte resíduos de aminoácido ou mais, sendo efetuadas simulações da interação cavidade de CNT-peptídeo no vácuo e em solvente implícito (água). Também foram efetuadas simulações da interação da cavidade de CNTs com a mistura racêmica de γ-valerolactama (GVL), o que se justificou pela possibilidade de avaliar a capacidade que a cavidade quiral imersa no líquido teria de se enriquecer com um dos enantiômeros. Os modelos de interação CNT-peptídeo mostraram que há competição de interações e a autoestabilização, via interações intramoleculares fortes, reduz a capacidade desses peptídeos de interagir seletivamente com a cavidade e isso dificulta afirmar, até o presente momento, se há ou não sensibilidade por parte da cavidade a algum dos isômeros. Quanto ao modelo de interação CNT-GVL, embora suas energias de interação não tenham mostrado seletividade, a análise das curvas das funções de distribuição radial de pares dos isômeros do GVL com relação ao centro de massas dos CNTs e em relação aos átomos que compõem os CNTs demonstram que há sim capacidade de enriquecimento quiral por parte dessas cavidades. No geral, foi constatado que o reconhecimento e o enriquecimento quiral se originam de interações sutis, por tanto, ainda há a necessidade de se estender e aprofundar essas investigações visto que os CNTs são cavidades bastante promissoras.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)porUniversidade Federal de São CarlosCâmpus São CarlosPrograma de Pós-Graduação em Química - PPGQUFSCarQuiralidadeNanotubos de carbonoSimetria da cavidadeCIENCIAS EXATAS E DA TERRA::QUIMICAEstudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidadesTheoretical study of chirality relations in confined Molecules and cavity symmetryinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisOnline60060016b006ca-a074-4ebf-bb35-5318719a39e1info:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFSCARinstname:Universidade Federal de São Carlos (UFSCAR)instacron:UFSCARORIGINALDissEFG.pdfDissEFG.pdfapplication/pdf4267420https://repositorio.ufscar.br/bitstream/ufscar/7410/1/DissEFG.pdf98e62530dc97837a7a33bbb222088c7eMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81957https://repositorio.ufscar.br/bitstream/ufscar/7410/2/license.txtae0398b6f8b235e40ad82cba6c50031dMD52TEXTDissEFG.pdf.txtDissEFG.pdf.txtExtracted texttext/plain119708https://repositorio.ufscar.br/bitstream/ufscar/7410/3/DissEFG.pdf.txt5a79caf749a7ed0f40a8c3d9558a4780MD53THUMBNAILDissEFG.pdf.jpgDissEFG.pdf.jpgIM Thumbnailimage/jpeg9870https://repositorio.ufscar.br/bitstream/ufscar/7410/4/DissEFG.pdf.jpgea7d5a0d0499f485ab30fb683afe989bMD54ufscar/74102023-09-18 18:30:49.4oai:repositorio.ufscar.br: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Repositório InstitucionalPUBhttps://repositorio.ufscar.br/oai/requestopendoar:43222023-09-18T18:30:49Repositório Institucional da UFSCAR - Universidade Federal de São Carlos (UFSCAR)false
dc.title.por.fl_str_mv Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
dc.title.alternative.eng.fl_str_mv Theoretical study of chirality relations in confined Molecules and cavity symmetry
title Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
spellingShingle Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
Gusmão, Eriosvaldo Florentino
Quiralidade
Nanotubos de carbono
Simetria da cavidade
CIENCIAS EXATAS E DA TERRA::QUIMICA
title_short Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
title_full Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
title_fullStr Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
title_full_unstemmed Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
title_sort Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades
author Gusmão, Eriosvaldo Florentino
author_facet Gusmão, Eriosvaldo Florentino
author_role author
dc.contributor.authorlattes.por.fl_str_mv http://lattes.cnpq.br/6078169516680977
dc.contributor.author.fl_str_mv Gusmão, Eriosvaldo Florentino
dc.contributor.advisor1.fl_str_mv Moura, André Farias de
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/0746428641961163
dc.contributor.advisor-co1.fl_str_mv Freitas, Luiz Carlos Gomide
dc.contributor.authorID.fl_str_mv 1ab023bf-583b-4c23-b838-1bf7d0296397
contributor_str_mv Moura, André Farias de
Freitas, Luiz Carlos Gomide
dc.subject.por.fl_str_mv Quiralidade
Nanotubos de carbono
Simetria da cavidade
topic Quiralidade
Nanotubos de carbono
Simetria da cavidade
CIENCIAS EXATAS E DA TERRA::QUIMICA
dc.subject.cnpq.fl_str_mv CIENCIAS EXATAS E DA TERRA::QUIMICA
description Carbone nanotubes (CNT) have been widely investigated both experimentally and theoretically because their remarkable geometry and physical-chemical properties, in regard especially of their possible applications as either reactors or catalysts of physical and chemical processes. This study computationally investigated the interaction between the symmetry cavity of chiral nanotubes and the symmetry of chiral molecules. It was selected CNT cavities capable of comporting peptides made of twenty amino acids residues or more and the simulations have been performed with CNTpeptide interaction in vacuum and in implicit solvent (water). Simulations of the interaction of CNT cavity with γ-valerolactone (GVL) racemic mixture were also performed, since they made it possible to evaluate the capacity of being enriched with one of the enantiomers beared by the chiral cavity when merged in liquid. The CNT-peptide interaction models demonstrated that there is competition of interactions, and the self-stabilization caused by strong intramolecular forces reduces the capacity of these peptides to interact selectively with the cavity, what makes it difficult to affirm, until present, whether there is or not cavity sensitivity to some of the isomers. Although the CNT-GVL model of energies interaction did not show selectivity capacity, the analysis of the radial distribution functions curves of GVL pairs of isomers in relation to the CNT center of masses and in relation to the CNT atoms truly demonstrate that there is chiral enrichment capacity in the case of these cavities. Generally, it was verified that the chiral recognition and enrichment are stemmed of subtle interactions, therefore there is still the necessity of expanding and deepening these investigations since the CNT are very promising chiral cavities.
publishDate 2015
dc.date.issued.fl_str_mv 2015-08-07
dc.date.accessioned.fl_str_mv 2016-09-23T18:35:18Z
dc.date.available.fl_str_mv 2016-09-23T18:35:18Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv GUSMÃO, Eriosvaldo Florentino. Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades. 2015. Dissertação (Mestrado em Química) – Universidade Federal de São Carlos, São Carlos, 2015. Disponível em: https://repositorio.ufscar.br/handle/ufscar/7410.
dc.identifier.uri.fl_str_mv https://repositorio.ufscar.br/handle/ufscar/7410
identifier_str_mv GUSMÃO, Eriosvaldo Florentino. Estudo teórico de relações entre quiralidade de moléculas confinadas e simetria de cavidades. 2015. Dissertação (Mestrado em Química) – Universidade Federal de São Carlos, São Carlos, 2015. Disponível em: https://repositorio.ufscar.br/handle/ufscar/7410.
url https://repositorio.ufscar.br/handle/ufscar/7410
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dc.publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Química - PPGQ
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publisher.none.fl_str_mv Universidade Federal de São Carlos
Câmpus São Carlos
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