Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species

Detalhes bibliográficos
Autor(a) principal: Volpato,Fabiana Caroline Zempulski
Data de Publicação: 2022
Outros Autores: Hernandez,Mayana Kieling, Lima-Morales,Daiana de, Wink,Priscila Lamb, Martins,Daniela de Souza, Oliveira,Katia Ruschel Pilger de, Barth,Afonso Luís
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Archives of Biology and Technology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100321
Resumo: Abstract To evaluate the performance of MALDI-TOF MS system as a tool for identification and differentiation of Burkholderia cenocepacia from other species of Burkholderia cepacia complex (Bcc). Fifty-three suggestive colonies were submitted to the MALDI-TOF Microflex LT 4.0® (Bruker Daltonik, Bremen, Germany) system for identification. We compared two protocols of protein extraction: (A) Direct Method and (B) Tube Extraction. In parallel, all isolates were subjected to molecular diagnosis (primers for recA gene) to identify species belonging to Bcc and to differentiate B. cenocepacia in genomovar IIIA or IIIB. MALDI-TOF was able to identify all isolates to the genus level and 94.3% (50/53) to species using both methods. The MALDI-TOF system was able to identify 38 out of the 40 isolates identified as B. cenocepacia by molecular techniques. In conclusion, MALDI-TOF Microflex LT 4.0® is a feasible technique and presents a low cost of reagents; it can be used for the reliable differentiation of B. cenocepacia from other species of Bcc.
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spelling Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex SpeciesBurkholderia cepacia complexBurkholderia cenocepaciaMALDI-TOF MSPolymerase Chain ReactionAbstract To evaluate the performance of MALDI-TOF MS system as a tool for identification and differentiation of Burkholderia cenocepacia from other species of Burkholderia cepacia complex (Bcc). Fifty-three suggestive colonies were submitted to the MALDI-TOF Microflex LT 4.0® (Bruker Daltonik, Bremen, Germany) system for identification. We compared two protocols of protein extraction: (A) Direct Method and (B) Tube Extraction. In parallel, all isolates were subjected to molecular diagnosis (primers for recA gene) to identify species belonging to Bcc and to differentiate B. cenocepacia in genomovar IIIA or IIIB. MALDI-TOF was able to identify all isolates to the genus level and 94.3% (50/53) to species using both methods. The MALDI-TOF system was able to identify 38 out of the 40 isolates identified as B. cenocepacia by molecular techniques. In conclusion, MALDI-TOF Microflex LT 4.0® is a feasible technique and presents a low cost of reagents; it can be used for the reliable differentiation of B. cenocepacia from other species of Bcc.Instituto de Tecnologia do Paraná - Tecpar2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100321Brazilian Archives of Biology and Technology v.65 2022reponame:Brazilian Archives of Biology and Technologyinstname:Instituto de Tecnologia do Paraná (Tecpar)instacron:TECPAR10.1590/1678-4324-2022210572info:eu-repo/semantics/openAccessVolpato,Fabiana Caroline ZempulskiHernandez,Mayana KielingLima-Morales,Daiana deWink,Priscila LambMartins,Daniela de SouzaOliveira,Katia Ruschel Pilger deBarth,Afonso Luíseng2022-06-02T00:00:00Zoai:scielo:S1516-89132022000100321Revistahttps://www.scielo.br/j/babt/https://old.scielo.br/oai/scielo-oai.phpbabt@tecpar.br||babt@tecpar.br1678-43241516-8913opendoar:2022-06-02T00:00Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)false
dc.title.none.fl_str_mv Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
title Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
spellingShingle Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
Volpato,Fabiana Caroline Zempulski
Burkholderia cepacia complex
Burkholderia cenocepacia
MALDI-TOF MS
Polymerase Chain Reaction
title_short Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
title_full Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
title_fullStr Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
title_full_unstemmed Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
title_sort Evaluation of MALDI-TOF MS System for the Identification and Differentiation of Burkholderia cepacia Complex Species
author Volpato,Fabiana Caroline Zempulski
author_facet Volpato,Fabiana Caroline Zempulski
Hernandez,Mayana Kieling
Lima-Morales,Daiana de
Wink,Priscila Lamb
Martins,Daniela de Souza
Oliveira,Katia Ruschel Pilger de
Barth,Afonso Luís
author_role author
author2 Hernandez,Mayana Kieling
Lima-Morales,Daiana de
Wink,Priscila Lamb
Martins,Daniela de Souza
Oliveira,Katia Ruschel Pilger de
Barth,Afonso Luís
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Volpato,Fabiana Caroline Zempulski
Hernandez,Mayana Kieling
Lima-Morales,Daiana de
Wink,Priscila Lamb
Martins,Daniela de Souza
Oliveira,Katia Ruschel Pilger de
Barth,Afonso Luís
dc.subject.por.fl_str_mv Burkholderia cepacia complex
Burkholderia cenocepacia
MALDI-TOF MS
Polymerase Chain Reaction
topic Burkholderia cepacia complex
Burkholderia cenocepacia
MALDI-TOF MS
Polymerase Chain Reaction
description Abstract To evaluate the performance of MALDI-TOF MS system as a tool for identification and differentiation of Burkholderia cenocepacia from other species of Burkholderia cepacia complex (Bcc). Fifty-three suggestive colonies were submitted to the MALDI-TOF Microflex LT 4.0® (Bruker Daltonik, Bremen, Germany) system for identification. We compared two protocols of protein extraction: (A) Direct Method and (B) Tube Extraction. In parallel, all isolates were subjected to molecular diagnosis (primers for recA gene) to identify species belonging to Bcc and to differentiate B. cenocepacia in genomovar IIIA or IIIB. MALDI-TOF was able to identify all isolates to the genus level and 94.3% (50/53) to species using both methods. The MALDI-TOF system was able to identify 38 out of the 40 isolates identified as B. cenocepacia by molecular techniques. In conclusion, MALDI-TOF Microflex LT 4.0® is a feasible technique and presents a low cost of reagents; it can be used for the reliable differentiation of B. cenocepacia from other species of Bcc.
publishDate 2022
dc.date.none.fl_str_mv 2022-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100321
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132022000100321
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4324-2022210572
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto de Tecnologia do Paraná - Tecpar
publisher.none.fl_str_mv Instituto de Tecnologia do Paraná - Tecpar
dc.source.none.fl_str_mv Brazilian Archives of Biology and Technology v.65 2022
reponame:Brazilian Archives of Biology and Technology
instname:Instituto de Tecnologia do Paraná (Tecpar)
instacron:TECPAR
instname_str Instituto de Tecnologia do Paraná (Tecpar)
instacron_str TECPAR
institution TECPAR
reponame_str Brazilian Archives of Biology and Technology
collection Brazilian Archives of Biology and Technology
repository.name.fl_str_mv Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)
repository.mail.fl_str_mv babt@tecpar.br||babt@tecpar.br
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