Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Brazilian Archives of Biology and Technology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009 |
Resumo: | The aim of this study was to evaluate the selected 41 SSR markers developed for yellow passion fruit (Passiflora edulis f. flavicarpa Sims.) for their transferability to 11 different Passiflora species. Twenty-one SSR were successfully amplified in 10 wild species of passion fruit producing 101 bands. All the markers were amplifiable for at least one species. The mean transferability was 68,8%, ranging from 15,4% (primer PE11) to 100 % (PE13, PE18, PE37, PE41 and PE88). Transferability was higher for the species from the Passiflora subgenus than for those from the Decaloba and Dysosmia subgenus. The results indicated a high level of nucleotide sequence conservation of the primer regions in the species evaluated, and consequently, they could potentially be used for the establishment of molecular strategies for use in passion fruit breeding and genetics. |
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Brazilian Archives of Biology and Technology |
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|
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Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora SpeciesTransferabilitySSRpassion fruitThe aim of this study was to evaluate the selected 41 SSR markers developed for yellow passion fruit (Passiflora edulis f. flavicarpa Sims.) for their transferability to 11 different Passiflora species. Twenty-one SSR were successfully amplified in 10 wild species of passion fruit producing 101 bands. All the markers were amplifiable for at least one species. The mean transferability was 68,8%, ranging from 15,4% (primer PE11) to 100 % (PE13, PE18, PE37, PE41 and PE88). Transferability was higher for the species from the Passiflora subgenus than for those from the Decaloba and Dysosmia subgenus. The results indicated a high level of nucleotide sequence conservation of the primer regions in the species evaluated, and consequently, they could potentially be used for the establishment of molecular strategies for use in passion fruit breeding and genetics.Instituto de Tecnologia do Paraná - Tecpar2013-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009Brazilian Archives of Biology and Technology v.56 n.5 2013reponame:Brazilian Archives of Biology and Technologyinstname:Instituto de Tecnologia do Paraná (Tecpar)instacron:TECPAR10.1590/S1516-89132013000500009info:eu-repo/semantics/openAccessOliveira,Gilmara Alvarenga FachardoPádua,Juliano GomesCosta,Juliana LelesJesus,Onildo Nunes deCarvalho,Fabiana Moraes deOliveira,Eder Jorge deeng2013-10-31T00:00:00Zoai:scielo:S1516-89132013000500009Revistahttps://www.scielo.br/j/babt/https://old.scielo.br/oai/scielo-oai.phpbabt@tecpar.br||babt@tecpar.br1678-43241516-8913opendoar:2013-10-31T00:00Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)false |
dc.title.none.fl_str_mv |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
title |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
spellingShingle |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species Oliveira,Gilmara Alvarenga Fachardo Transferability SSR passion fruit |
title_short |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
title_full |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
title_fullStr |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
title_full_unstemmed |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
title_sort |
Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species |
author |
Oliveira,Gilmara Alvarenga Fachardo |
author_facet |
Oliveira,Gilmara Alvarenga Fachardo Pádua,Juliano Gomes Costa,Juliana Leles Jesus,Onildo Nunes de Carvalho,Fabiana Moraes de Oliveira,Eder Jorge de |
author_role |
author |
author2 |
Pádua,Juliano Gomes Costa,Juliana Leles Jesus,Onildo Nunes de Carvalho,Fabiana Moraes de Oliveira,Eder Jorge de |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Oliveira,Gilmara Alvarenga Fachardo Pádua,Juliano Gomes Costa,Juliana Leles Jesus,Onildo Nunes de Carvalho,Fabiana Moraes de Oliveira,Eder Jorge de |
dc.subject.por.fl_str_mv |
Transferability SSR passion fruit |
topic |
Transferability SSR passion fruit |
description |
The aim of this study was to evaluate the selected 41 SSR markers developed for yellow passion fruit (Passiflora edulis f. flavicarpa Sims.) for their transferability to 11 different Passiflora species. Twenty-one SSR were successfully amplified in 10 wild species of passion fruit producing 101 bands. All the markers were amplifiable for at least one species. The mean transferability was 68,8%, ranging from 15,4% (primer PE11) to 100 % (PE13, PE18, PE37, PE41 and PE88). Transferability was higher for the species from the Passiflora subgenus than for those from the Decaloba and Dysosmia subgenus. The results indicated a high level of nucleotide sequence conservation of the primer regions in the species evaluated, and consequently, they could potentially be used for the establishment of molecular strategies for use in passion fruit breeding and genetics. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-10-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1516-89132013000500009 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto de Tecnologia do Paraná - Tecpar |
publisher.none.fl_str_mv |
Instituto de Tecnologia do Paraná - Tecpar |
dc.source.none.fl_str_mv |
Brazilian Archives of Biology and Technology v.56 n.5 2013 reponame:Brazilian Archives of Biology and Technology instname:Instituto de Tecnologia do Paraná (Tecpar) instacron:TECPAR |
instname_str |
Instituto de Tecnologia do Paraná (Tecpar) |
instacron_str |
TECPAR |
institution |
TECPAR |
reponame_str |
Brazilian Archives of Biology and Technology |
collection |
Brazilian Archives of Biology and Technology |
repository.name.fl_str_mv |
Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar) |
repository.mail.fl_str_mv |
babt@tecpar.br||babt@tecpar.br |
_version_ |
1750318275711991808 |