Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species

Detalhes bibliográficos
Autor(a) principal: Oliveira,Gilmara Alvarenga Fachardo
Data de Publicação: 2013
Outros Autores: Pádua,Juliano Gomes, Costa,Juliana Leles, Jesus,Onildo Nunes de, Carvalho,Fabiana Moraes de, Oliveira,Eder Jorge de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Archives of Biology and Technology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009
Resumo: The aim of this study was to evaluate the selected 41 SSR markers developed for yellow passion fruit (Passiflora edulis f. flavicarpa Sims.) for their transferability to 11 different Passiflora species. Twenty-one SSR were successfully amplified in 10 wild species of passion fruit producing 101 bands. All the markers were amplifiable for at least one species. The mean transferability was 68,8%, ranging from 15,4% (primer PE11) to 100 % (PE13, PE18, PE37, PE41 and PE88). Transferability was higher for the species from the Passiflora subgenus than for those from the Decaloba and Dysosmia subgenus. The results indicated a high level of nucleotide sequence conservation of the primer regions in the species evaluated, and consequently, they could potentially be used for the establishment of molecular strategies for use in passion fruit breeding and genetics.
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spelling Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora SpeciesTransferabilitySSRpassion fruitThe aim of this study was to evaluate the selected 41 SSR markers developed for yellow passion fruit (Passiflora edulis f. flavicarpa Sims.) for their transferability to 11 different Passiflora species. Twenty-one SSR were successfully amplified in 10 wild species of passion fruit producing 101 bands. All the markers were amplifiable for at least one species. The mean transferability was 68,8%, ranging from 15,4% (primer PE11) to 100 % (PE13, PE18, PE37, PE41 and PE88). Transferability was higher for the species from the Passiflora subgenus than for those from the Decaloba and Dysosmia subgenus. The results indicated a high level of nucleotide sequence conservation of the primer regions in the species evaluated, and consequently, they could potentially be used for the establishment of molecular strategies for use in passion fruit breeding and genetics.Instituto de Tecnologia do Paraná - Tecpar2013-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009Brazilian Archives of Biology and Technology v.56 n.5 2013reponame:Brazilian Archives of Biology and Technologyinstname:Instituto de Tecnologia do Paraná (Tecpar)instacron:TECPAR10.1590/S1516-89132013000500009info:eu-repo/semantics/openAccessOliveira,Gilmara Alvarenga FachardoPádua,Juliano GomesCosta,Juliana LelesJesus,Onildo Nunes deCarvalho,Fabiana Moraes deOliveira,Eder Jorge deeng2013-10-31T00:00:00Zoai:scielo:S1516-89132013000500009Revistahttps://www.scielo.br/j/babt/https://old.scielo.br/oai/scielo-oai.phpbabt@tecpar.br||babt@tecpar.br1678-43241516-8913opendoar:2013-10-31T00:00Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)false
dc.title.none.fl_str_mv Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
title Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
spellingShingle Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
Oliveira,Gilmara Alvarenga Fachardo
Transferability
SSR
passion fruit
title_short Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
title_full Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
title_fullStr Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
title_full_unstemmed Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
title_sort Cross-species amplification of microsatellite loci developed for Passiflora edulis Sims. in related Passiflora Species
author Oliveira,Gilmara Alvarenga Fachardo
author_facet Oliveira,Gilmara Alvarenga Fachardo
Pádua,Juliano Gomes
Costa,Juliana Leles
Jesus,Onildo Nunes de
Carvalho,Fabiana Moraes de
Oliveira,Eder Jorge de
author_role author
author2 Pádua,Juliano Gomes
Costa,Juliana Leles
Jesus,Onildo Nunes de
Carvalho,Fabiana Moraes de
Oliveira,Eder Jorge de
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Oliveira,Gilmara Alvarenga Fachardo
Pádua,Juliano Gomes
Costa,Juliana Leles
Jesus,Onildo Nunes de
Carvalho,Fabiana Moraes de
Oliveira,Eder Jorge de
dc.subject.por.fl_str_mv Transferability
SSR
passion fruit
topic Transferability
SSR
passion fruit
description The aim of this study was to evaluate the selected 41 SSR markers developed for yellow passion fruit (Passiflora edulis f. flavicarpa Sims.) for their transferability to 11 different Passiflora species. Twenty-one SSR were successfully amplified in 10 wild species of passion fruit producing 101 bands. All the markers were amplifiable for at least one species. The mean transferability was 68,8%, ranging from 15,4% (primer PE11) to 100 % (PE13, PE18, PE37, PE41 and PE88). Transferability was higher for the species from the Passiflora subgenus than for those from the Decaloba and Dysosmia subgenus. The results indicated a high level of nucleotide sequence conservation of the primer regions in the species evaluated, and consequently, they could potentially be used for the establishment of molecular strategies for use in passion fruit breeding and genetics.
publishDate 2013
dc.date.none.fl_str_mv 2013-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1516-89132013000500009
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1516-89132013000500009
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto de Tecnologia do Paraná - Tecpar
publisher.none.fl_str_mv Instituto de Tecnologia do Paraná - Tecpar
dc.source.none.fl_str_mv Brazilian Archives of Biology and Technology v.56 n.5 2013
reponame:Brazilian Archives of Biology and Technology
instname:Instituto de Tecnologia do Paraná (Tecpar)
instacron:TECPAR
instname_str Instituto de Tecnologia do Paraná (Tecpar)
instacron_str TECPAR
institution TECPAR
reponame_str Brazilian Archives of Biology and Technology
collection Brazilian Archives of Biology and Technology
repository.name.fl_str_mv Brazilian Archives of Biology and Technology - Instituto de Tecnologia do Paraná (Tecpar)
repository.mail.fl_str_mv babt@tecpar.br||babt@tecpar.br
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