Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River

Detalhes bibliográficos
Autor(a) principal: Melo, Edmara Ramos
Data de Publicação: 2020
Outros Autores: Nascimento, Alany Ítala Pontes, Corrêa, Sophia Tenenbaum Bacellar, Soares, Emerson Carlos, Santos, Elton Lima, Machado, Valéria Nogueira, Silva, Themis Jesus
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Semina. Ciências Agrárias (Online)
Texto Completo: https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/39585
Resumo: Pisciculture has been an important part of the economy in many regions of Brazil, and the tambaqui (Colossoma macropomum) stands out as one of the country’s most commercialized native freshwater fish species. Loss of genetic variability can affect characteristics such as reproduction and growth rates, as well as disease resistance and is of great concern in this field. Molecular markers such as mitochondrial DNA genes have been increasingly used to understand genetic variability in species of economic importance. This study aimed to characterize the genetic variability of tambaqui populations reared in two fish farms (Itiúba, AL and Betume, SE) of the lower São Francisco River by analyzing the control region and ATPase genes of mitochondrial DNA. Sequencing of samples from progenies and breeding individuals identified 42 haplotypes (32 unique), of which four haplotypes were shared between the two fish farms as a result of a founder effect, because individuals from Itiúba formed the stock of the Betume fish farming Station. Haplotype diversity was high in both locations. Analysis of Molecular Variance (AMOVA) revealed greater genetic variation within populations (96.76%) than between them (3.24%) and the FST value (0.03) indicated low genetic differentiation between the two populations. The observed high genetic variability can be explained by the number of breeders in the two fish farms (200 in Itiúba and 1400 in Betume) and the breeding management system, which seems to be effective in maintaining stock variability.
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spelling Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco RiverCaracterização genética de estoques de tambaqui de duas estações de piscicultura no baixo rio São FranciscoATPaseColossoma macropomumControl regionGenetic variability.ATPaseColossoma macropomumRegião controleVariabilidade genética.Pisciculture has been an important part of the economy in many regions of Brazil, and the tambaqui (Colossoma macropomum) stands out as one of the country’s most commercialized native freshwater fish species. Loss of genetic variability can affect characteristics such as reproduction and growth rates, as well as disease resistance and is of great concern in this field. Molecular markers such as mitochondrial DNA genes have been increasingly used to understand genetic variability in species of economic importance. This study aimed to characterize the genetic variability of tambaqui populations reared in two fish farms (Itiúba, AL and Betume, SE) of the lower São Francisco River by analyzing the control region and ATPase genes of mitochondrial DNA. Sequencing of samples from progenies and breeding individuals identified 42 haplotypes (32 unique), of which four haplotypes were shared between the two fish farms as a result of a founder effect, because individuals from Itiúba formed the stock of the Betume fish farming Station. Haplotype diversity was high in both locations. Analysis of Molecular Variance (AMOVA) revealed greater genetic variation within populations (96.76%) than between them (3.24%) and the FST value (0.03) indicated low genetic differentiation between the two populations. The observed high genetic variability can be explained by the number of breeders in the two fish farms (200 in Itiúba and 1400 in Betume) and the breeding management system, which seems to be effective in maintaining stock variability.A piscicultura tem ocupado um lugar de destaque na economia de muitas regiões do Brasil, e o tambaqui (Colossoma macropomum) se sobressai por ser uma das espécies nativas de peixes de água doce mais comercializadas do país. A diminuição da variabilidade genética pode afetar características como as taxas de reprodução e crescimento, bem como resistência a doenças e é de grande preocupação nesse ramo. Marcadores moleculares, como os genes do DNA mitocondrial, vem sendo cada vez mais utilizados para investigar a variabilidade genética em espécies de importância econômica. Assim, este estudo teve como objetivo caracterizar a variabilidade genética de populações de tambaqui cultivados em duas pisciculturas (Itiúba, AL e Betume, SE) do baixo Rio São Francisco, utilizando a região controle e os genes da ATPase do DNA mitocondrial. O sequenciamento de amostras de progênies e reprodutores identificou 42 haplótipos (32 únicos). Destes, quatro haplótipos foram compartilhados entre as duas pisciculturas estudadas, o que é resultado de um efeito fundador, uma vez que indivíduos de Itiúba foram levados para compor o estoque da Estação de Piscicultura de Betume. A diversidade haplotípica foi alta em ambas as localidades. Análise de Variância Molecular (AMOVA) demonstrou maior variação genética dentro das populações (96.76%) do que entre elas (3.24%) e o valor de Fst (0.03) indicou pouca diferenciação genética entre as duas populações analisadas. A alta variabilidade genética encontrada pode ser explicada pelo número de reprodutores nas duas pisciculturas (200 em Itiúba e 1400 em Betume) e o manejo reprodutivo, que parece ser eficaz na manutenção da variabilidade de estoques.UEL2020-11-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionMitochondrial DNA; Sequencing; genetic variabilityapplication/pdfhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/3958510.5433/1679-0359.2020v41n6Supl2p3323Semina: Ciências Agrárias; Vol. 41 No. 6Supl2 (2020); 3323-3334Semina: Ciências Agrárias; v. 41 n. 6Supl2 (2020); 3323-33341679-03591676-546Xreponame:Semina. Ciências Agrárias (Online)instname:Universidade Estadual de Londrina (UEL)instacron:UELenghttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/39585/28287Copyright (c) 2020 Semina: Ciências Agráriashttp://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessMelo, Edmara RamosNascimento, Alany Ítala PontesCorrêa, Sophia Tenenbaum BacellarSoares, Emerson CarlosSantos, Elton LimaMachado, Valéria NogueiraSilva, Themis Jesus2022-10-06T11:21:53Zoai:ojs.pkp.sfu.ca:article/39585Revistahttp://www.uel.br/revistas/uel/index.php/semagrariasPUBhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/oaisemina.agrarias@uel.br1679-03591676-546Xopendoar:2022-10-06T11:21:53Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)false
dc.title.none.fl_str_mv Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
Caracterização genética de estoques de tambaqui de duas estações de piscicultura no baixo rio São Francisco
title Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
spellingShingle Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
Melo, Edmara Ramos
ATPase
Colossoma macropomum
Control region
Genetic variability.
ATPase
Colossoma macropomum
Região controle
Variabilidade genética.
title_short Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
title_full Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
title_fullStr Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
title_full_unstemmed Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
title_sort Genetic characterization of tambaqui stocks from two pisciculture stations in the lower São Francisco River
author Melo, Edmara Ramos
author_facet Melo, Edmara Ramos
Nascimento, Alany Ítala Pontes
Corrêa, Sophia Tenenbaum Bacellar
Soares, Emerson Carlos
Santos, Elton Lima
Machado, Valéria Nogueira
Silva, Themis Jesus
author_role author
author2 Nascimento, Alany Ítala Pontes
Corrêa, Sophia Tenenbaum Bacellar
Soares, Emerson Carlos
Santos, Elton Lima
Machado, Valéria Nogueira
Silva, Themis Jesus
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Melo, Edmara Ramos
Nascimento, Alany Ítala Pontes
Corrêa, Sophia Tenenbaum Bacellar
Soares, Emerson Carlos
Santos, Elton Lima
Machado, Valéria Nogueira
Silva, Themis Jesus
dc.subject.por.fl_str_mv ATPase
Colossoma macropomum
Control region
Genetic variability.
ATPase
Colossoma macropomum
Região controle
Variabilidade genética.
topic ATPase
Colossoma macropomum
Control region
Genetic variability.
ATPase
Colossoma macropomum
Região controle
Variabilidade genética.
description Pisciculture has been an important part of the economy in many regions of Brazil, and the tambaqui (Colossoma macropomum) stands out as one of the country’s most commercialized native freshwater fish species. Loss of genetic variability can affect characteristics such as reproduction and growth rates, as well as disease resistance and is of great concern in this field. Molecular markers such as mitochondrial DNA genes have been increasingly used to understand genetic variability in species of economic importance. This study aimed to characterize the genetic variability of tambaqui populations reared in two fish farms (Itiúba, AL and Betume, SE) of the lower São Francisco River by analyzing the control region and ATPase genes of mitochondrial DNA. Sequencing of samples from progenies and breeding individuals identified 42 haplotypes (32 unique), of which four haplotypes were shared between the two fish farms as a result of a founder effect, because individuals from Itiúba formed the stock of the Betume fish farming Station. Haplotype diversity was high in both locations. Analysis of Molecular Variance (AMOVA) revealed greater genetic variation within populations (96.76%) than between them (3.24%) and the FST value (0.03) indicated low genetic differentiation between the two populations. The observed high genetic variability can be explained by the number of breeders in the two fish farms (200 in Itiúba and 1400 in Betume) and the breeding management system, which seems to be effective in maintaining stock variability.
publishDate 2020
dc.date.none.fl_str_mv 2020-11-06
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Mitochondrial DNA; Sequencing; genetic variability
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/39585
10.5433/1679-0359.2020v41n6Supl2p3323
url https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/39585
identifier_str_mv 10.5433/1679-0359.2020v41n6Supl2p3323
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/39585/28287
dc.rights.driver.fl_str_mv Copyright (c) 2020 Semina: Ciências Agrárias
http://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2020 Semina: Ciências Agrárias
http://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv UEL
publisher.none.fl_str_mv UEL
dc.source.none.fl_str_mv Semina: Ciências Agrárias; Vol. 41 No. 6Supl2 (2020); 3323-3334
Semina: Ciências Agrárias; v. 41 n. 6Supl2 (2020); 3323-3334
1679-0359
1676-546X
reponame:Semina. Ciências Agrárias (Online)
instname:Universidade Estadual de Londrina (UEL)
instacron:UEL
instname_str Universidade Estadual de Londrina (UEL)
instacron_str UEL
institution UEL
reponame_str Semina. Ciências Agrárias (Online)
collection Semina. Ciências Agrárias (Online)
repository.name.fl_str_mv Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)
repository.mail.fl_str_mv semina.agrarias@uel.br
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