Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil)
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Semina. Ciências Agrárias (Online) |
Texto Completo: | https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/32727 |
Resumo: | In recent years, anthropogenic factors such as pollution, overfishing, and construction of hydroelectric plants have significantly impacted natural fish populations. Research focusing on genetically evaluation of these impacts is necessary to objectively target conservation programs. The aim of this study was to evaluate the genetic diversity of Curimba (Prochilodus lineatus), Pacu (Piaractus mesopotamicus), and Piracanjuba (Brycon orbignyanus) populations from the Água Vermelha Reservoir, Rio Grande-SP. Microsatellite loci were amplified, producing 56, 24, and 26 alleles for the populations of the three species, respectively. The number of alleles per locus ranged from three to ten for P. lineatus, two to five for P. mesopotamicus, and two to four for B. orbignyanus. The observed heterozygosity (Ho) was higher in the P. lineatus population (0.547), relative to the P. mesopotamicus and B. orbignyanus populations (0.473 and 0.527, respectively). The mean values of Ho were lower than the average expected heterozygosity (He) in the three species, being corroborated by the positive inbreeding coefficient (Fis). Deviations from the Hardy-Weinberg equilibrium (HWE) were found in five, three, and two loci for P. lineatus, P. mesopotamicus, and B. orbignyanus, respectively. Wilcoxon tests revealed recent bottlenecks in the three species, evidenced by a significant excess of heterozygotes (p < 0.05) detected only in the Infinite Allele Model (IAM). In conclusion, adequate genetic variability was observed in the three populations with the presence of heterozygous deficits. |
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Semina. Ciências Agrárias (Online) |
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Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil)Diversidade genética de populações de peixes migratórios do reservatório do Rio Grande (São Paulo, Brasil)Brycon orbignyanusConservationGenetic variabilityMicrosatellitesPiaractus mesopotamicusProchilodus lineatus.Brycon orbignyanusConservaçãoMicrossatélitesPiaractus mesopotamicusProchilodus lineatusVariabilidade genética.In recent years, anthropogenic factors such as pollution, overfishing, and construction of hydroelectric plants have significantly impacted natural fish populations. Research focusing on genetically evaluation of these impacts is necessary to objectively target conservation programs. The aim of this study was to evaluate the genetic diversity of Curimba (Prochilodus lineatus), Pacu (Piaractus mesopotamicus), and Piracanjuba (Brycon orbignyanus) populations from the Água Vermelha Reservoir, Rio Grande-SP. Microsatellite loci were amplified, producing 56, 24, and 26 alleles for the populations of the three species, respectively. The number of alleles per locus ranged from three to ten for P. lineatus, two to five for P. mesopotamicus, and two to four for B. orbignyanus. The observed heterozygosity (Ho) was higher in the P. lineatus population (0.547), relative to the P. mesopotamicus and B. orbignyanus populations (0.473 and 0.527, respectively). The mean values of Ho were lower than the average expected heterozygosity (He) in the three species, being corroborated by the positive inbreeding coefficient (Fis). Deviations from the Hardy-Weinberg equilibrium (HWE) were found in five, three, and two loci for P. lineatus, P. mesopotamicus, and B. orbignyanus, respectively. Wilcoxon tests revealed recent bottlenecks in the three species, evidenced by a significant excess of heterozygotes (p < 0.05) detected only in the Infinite Allele Model (IAM). In conclusion, adequate genetic variability was observed in the three populations with the presence of heterozygous deficits.Nos últimos anos, fatores antrópicos como poluição, sobrepesca e construção de hidrelétricas têm impactado significativamente as populações naturais de peixes. Pesquisas que permitam avaliar geneticamente esse impacto são necessárias para orientar objetivamente programas de conservação. O objetivo do presente estudo foi avaliar a diversidade genética de populações de Curimba (Prochilodus lineatus), Pacu (Piaractus mesopotamicus) e Piracanjuba (Brycon orbignyanus) provenientes do reservatório de Água Vermelha, Rio Grande-SP. Foram amplificados loci microssatélites que produziram 56, 24 e 26 alelos para as populações das três espécies, respectivamente. O número de alelos por locus variou de três a dez para P. lineatus, dois a cinco para P. mesopotamicus e dois a quatro para B. orbignianus. A heterozigosidade observada (Ho) foi mais elevada na população de P. lineatus (0,547) em relação às populações de P. mesopotamicus e B. orbignyanus (0,473 e 0,527, respectivamente). A média dos valores de Ho foram inferiores à média de He nas três espécies sendo corroborado pelo Fis positivo observado. Foi encontrado desvio do equilíbrio de Hardy-Weinberg (HWE) em cinco loci para P. lineatus, três loci para P. mesopotamicus e dois em B. orbignyanus. A análise de bottleneck revelou excesso de heterozigotos (p < 0,05) pelo teste de Wilcoxon nas três espécies apenas no modelo Infinite Allele Model (IAM). Foi observada adequada variabilidade genética nas três populações com a presença de déficit de heterozigotos.UEL2019-02-15info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAvaliado por paresPesquisa científicaapplication/pdfhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/3272710.5433/1679-0359.2019v40n1p503Semina: Ciências Agrárias; Vol. 40 No. 1 (2019); 503-510Semina: Ciências Agrárias; v. 40 n. 1 (2019); 503-5101679-03591676-546Xreponame:Semina. Ciências Agrárias (Online)instname:Universidade Estadual de Londrina (UEL)instacron:UELenghttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/32727/25025Copyright (c) 2019 Semina: Ciências Agráriashttp://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessLopera-Barrero, Nelson MauricioSouza, Felipe Pinheiro deLima, Ed Christian Suzuki deUrrea-Rojas, Angela MariaCastro, Pedro Luiz deGoes, Elenice Souza dos ReisPandolfi, Victor César FreitasYamachita, Andrei LincolnOliveira, Carlos Antonio Lopes deLeite, Natália GonçalvesRibeiro, Ricardo Pereira2022-10-19T15:38:26Zoai:ojs.pkp.sfu.ca:article/32727Revistahttp://www.uel.br/revistas/uel/index.php/semagrariasPUBhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/oaisemina.agrarias@uel.br1679-03591676-546Xopendoar:2022-10-19T15:38:26Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)false |
dc.title.none.fl_str_mv |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) Diversidade genética de populações de peixes migratórios do reservatório do Rio Grande (São Paulo, Brasil) |
title |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) |
spellingShingle |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) Lopera-Barrero, Nelson Mauricio Brycon orbignyanus Conservation Genetic variability Microsatellites Piaractus mesopotamicus Prochilodus lineatus. Brycon orbignyanus Conservação Microssatélites Piaractus mesopotamicus Prochilodus lineatus Variabilidade genética. |
title_short |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) |
title_full |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) |
title_fullStr |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) |
title_full_unstemmed |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) |
title_sort |
Genetic diversity of migratory fish populations of the Rio Grande Reservoir (São Paulo, Brazil) |
author |
Lopera-Barrero, Nelson Mauricio |
author_facet |
Lopera-Barrero, Nelson Mauricio Souza, Felipe Pinheiro de Lima, Ed Christian Suzuki de Urrea-Rojas, Angela Maria Castro, Pedro Luiz de Goes, Elenice Souza dos Reis Pandolfi, Victor César Freitas Yamachita, Andrei Lincoln Oliveira, Carlos Antonio Lopes de Leite, Natália Gonçalves Ribeiro, Ricardo Pereira |
author_role |
author |
author2 |
Souza, Felipe Pinheiro de Lima, Ed Christian Suzuki de Urrea-Rojas, Angela Maria Castro, Pedro Luiz de Goes, Elenice Souza dos Reis Pandolfi, Victor César Freitas Yamachita, Andrei Lincoln Oliveira, Carlos Antonio Lopes de Leite, Natália Gonçalves Ribeiro, Ricardo Pereira |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Lopera-Barrero, Nelson Mauricio Souza, Felipe Pinheiro de Lima, Ed Christian Suzuki de Urrea-Rojas, Angela Maria Castro, Pedro Luiz de Goes, Elenice Souza dos Reis Pandolfi, Victor César Freitas Yamachita, Andrei Lincoln Oliveira, Carlos Antonio Lopes de Leite, Natália Gonçalves Ribeiro, Ricardo Pereira |
dc.subject.por.fl_str_mv |
Brycon orbignyanus Conservation Genetic variability Microsatellites Piaractus mesopotamicus Prochilodus lineatus. Brycon orbignyanus Conservação Microssatélites Piaractus mesopotamicus Prochilodus lineatus Variabilidade genética. |
topic |
Brycon orbignyanus Conservation Genetic variability Microsatellites Piaractus mesopotamicus Prochilodus lineatus. Brycon orbignyanus Conservação Microssatélites Piaractus mesopotamicus Prochilodus lineatus Variabilidade genética. |
description |
In recent years, anthropogenic factors such as pollution, overfishing, and construction of hydroelectric plants have significantly impacted natural fish populations. Research focusing on genetically evaluation of these impacts is necessary to objectively target conservation programs. The aim of this study was to evaluate the genetic diversity of Curimba (Prochilodus lineatus), Pacu (Piaractus mesopotamicus), and Piracanjuba (Brycon orbignyanus) populations from the Água Vermelha Reservoir, Rio Grande-SP. Microsatellite loci were amplified, producing 56, 24, and 26 alleles for the populations of the three species, respectively. The number of alleles per locus ranged from three to ten for P. lineatus, two to five for P. mesopotamicus, and two to four for B. orbignyanus. The observed heterozygosity (Ho) was higher in the P. lineatus population (0.547), relative to the P. mesopotamicus and B. orbignyanus populations (0.473 and 0.527, respectively). The mean values of Ho were lower than the average expected heterozygosity (He) in the three species, being corroborated by the positive inbreeding coefficient (Fis). Deviations from the Hardy-Weinberg equilibrium (HWE) were found in five, three, and two loci for P. lineatus, P. mesopotamicus, and B. orbignyanus, respectively. Wilcoxon tests revealed recent bottlenecks in the three species, evidenced by a significant excess of heterozygotes (p < 0.05) detected only in the Infinite Allele Model (IAM). In conclusion, adequate genetic variability was observed in the three populations with the presence of heterozygous deficits. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-02-15 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Avaliado por pares Pesquisa científica |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/32727 10.5433/1679-0359.2019v40n1p503 |
url |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/32727 |
identifier_str_mv |
10.5433/1679-0359.2019v40n1p503 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/32727/25025 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2019 Semina: Ciências Agrárias http://creativecommons.org/licenses/by-nc/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2019 Semina: Ciências Agrárias http://creativecommons.org/licenses/by-nc/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
UEL |
publisher.none.fl_str_mv |
UEL |
dc.source.none.fl_str_mv |
Semina: Ciências Agrárias; Vol. 40 No. 1 (2019); 503-510 Semina: Ciências Agrárias; v. 40 n. 1 (2019); 503-510 1679-0359 1676-546X reponame:Semina. Ciências Agrárias (Online) instname:Universidade Estadual de Londrina (UEL) instacron:UEL |
instname_str |
Universidade Estadual de Londrina (UEL) |
instacron_str |
UEL |
institution |
UEL |
reponame_str |
Semina. Ciências Agrárias (Online) |
collection |
Semina. Ciências Agrárias (Online) |
repository.name.fl_str_mv |
Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL) |
repository.mail.fl_str_mv |
semina.agrarias@uel.br |
_version_ |
1799306079650185216 |