Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
Autor(a) principal: | |
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Data de Publicação: | 2024 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Semina. Ciências Agrárias (Online) |
Texto Completo: | https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251 |
Resumo: | Bacterial wilt, caused by phytopathogenic species of the genus Ralstonia, is one of the main diseases affecting the tomato crop. The Ralstonia solanacearum species complex occurs as a result of variants being widely diverse in terms of adaptation to different climatic conditions, host variations, and aggressiveness, which complicate disease control recommendations. In this study, we employed molecular methods to analyze 26 R. solanacearum isolates collected from tomato plants cultivated in the southwest region of Paraná, Brazil. Isolates were obtained from plants exhibiting wilt symptoms in a protected cultivation system and in an open field. The specific primers 759/760 confirmed the isolates as part of the Ralstonia solanacearum complex, and Nmult primers were used to identify the phylotype. Variability analysis using BOX-PCR with the BOX-A1R primer on 19 isolates revealed molecular diversity. All 26 isolates were confirmed as Ralstonia solanacearum, belonging to phylotype II. Comparison of genomic DNA band patterns amplified by BOX-PCR indicated molecular variability, forming eight groups at a similarity level of 0.63. These results confirm the prevalence of R. solanacearum phylotype II in southwestern Paraná. This information aids decision-making in disease management and contributes to breeding efforts aiming at the development of resistant cultivars. |
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Semina. Ciências Agrárias (Online) |
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Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern ParanáIdentificação molecular do agente causal da murcha bacteriana em plantas de tomateiro no sudoeste do ParanáGenetic variabilityRalstonia solanacearumSolanum lycopersicum.Variabilidade genéticaRalstonia solanacearuSolanum lycopersicum.Bacterial wilt, caused by phytopathogenic species of the genus Ralstonia, is one of the main diseases affecting the tomato crop. The Ralstonia solanacearum species complex occurs as a result of variants being widely diverse in terms of adaptation to different climatic conditions, host variations, and aggressiveness, which complicate disease control recommendations. In this study, we employed molecular methods to analyze 26 R. solanacearum isolates collected from tomato plants cultivated in the southwest region of Paraná, Brazil. Isolates were obtained from plants exhibiting wilt symptoms in a protected cultivation system and in an open field. The specific primers 759/760 confirmed the isolates as part of the Ralstonia solanacearum complex, and Nmult primers were used to identify the phylotype. Variability analysis using BOX-PCR with the BOX-A1R primer on 19 isolates revealed molecular diversity. All 26 isolates were confirmed as Ralstonia solanacearum, belonging to phylotype II. Comparison of genomic DNA band patterns amplified by BOX-PCR indicated molecular variability, forming eight groups at a similarity level of 0.63. These results confirm the prevalence of R. solanacearum phylotype II in southwestern Paraná. This information aids decision-making in disease management and contributes to breeding efforts aiming at the development of resistant cultivars. A murcha bacteriana, causada por espécies fitopatogênicas do gênero Ralstonia, é uma das principais doenças do tomateiro. O complexo de espécies de Ralstonia solanacearum ocorre devido a variantes com alta diversidade em termos de adaptação a diferentes condições climáticas, variabilidade de hospedeiros e agressividade, características que interferem na recomendação para o controle da doença. Neste estudo foram analisados por métodos moleculares 26 isolados de R. solanacearum isolados de plantas de tomateiro cultivadas na região sudoeste do Paraná. Os isolados foram obtidos de plantas com sintomas de murcha cultivadas em sistema de cultivo protegido e campo aberto. Os iniciadores específicos 759/760 foram usados para confirmar que os isolados pertenciam ao complexo específico Ralstonia solanacearum e os iniciadores Nmult foram usados para identificar o filotipo. A análise de variabilidade foi realizada por BOX-PCR com o primer BOX-A1R para 19 isolados. Os vinte e seis isolados foram confirmados como Ralstonia solanacearum e pertencentes ao filotipo II. A comparação entre os padrões de bandas do DNA genômico amplificado por BOX-PCR demonstrou variabilidade molecular com a formação de oito grupos ao nível de 0,63 de similaridade. Esses resultados confirmam a predominância de R. solanacearum filotipo II no sudoeste do Paraná e auxiliam na tomada de decisões relacionadas ao manejo da doença, bem como no melhoramento genético para obtenção de cultivares resistentes. UEL2024-01-30info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAvaliado por paresapplication/pdfhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/4825110.5433/1679-0359.2023v44n6p2249Semina: Ciências Agrárias; Vol. 44 No. 6 (2023); 2249-2258Semina: Ciências Agrárias; v. 44 n. 6 (2023); 2249-22581679-03591676-546Xreponame:Semina. Ciências Agrárias (Online)instname:Universidade Estadual de Londrina (UEL)instacron:UELenghttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251/49972Copyright (c) 2024 Semina: Ciências Agráriashttp://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessZanon, Vanessa CasiraghiKafer, João Matheus Hagn, JaquelineCardoso, Jessica Dallemole-Giaretta, RosangelaFinatto, Taciane Vargas, Thiago de Oliveira2024-02-07T18:55:10Zoai:ojs.pkp.sfu.ca:article/48251Revistahttp://www.uel.br/revistas/uel/index.php/semagrariasPUBhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/oaisemina.agrarias@uel.br1679-03591676-546Xopendoar:2024-02-07T18:55:10Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)false |
dc.title.none.fl_str_mv |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná Identificação molecular do agente causal da murcha bacteriana em plantas de tomateiro no sudoeste do Paraná |
title |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná |
spellingShingle |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná Zanon, Vanessa Casiraghi Genetic variability Ralstonia solanacearum Solanum lycopersicum. Variabilidade genética Ralstonia solanacearu Solanum lycopersicum. |
title_short |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná |
title_full |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná |
title_fullStr |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná |
title_full_unstemmed |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná |
title_sort |
Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná |
author |
Zanon, Vanessa Casiraghi |
author_facet |
Zanon, Vanessa Casiraghi Kafer, João Matheus Hagn, Jaqueline Cardoso, Jessica Dallemole-Giaretta, Rosangela Finatto, Taciane Vargas, Thiago de Oliveira |
author_role |
author |
author2 |
Kafer, João Matheus Hagn, Jaqueline Cardoso, Jessica Dallemole-Giaretta, Rosangela Finatto, Taciane Vargas, Thiago de Oliveira |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Zanon, Vanessa Casiraghi Kafer, João Matheus Hagn, Jaqueline Cardoso, Jessica Dallemole-Giaretta, Rosangela Finatto, Taciane Vargas, Thiago de Oliveira |
dc.subject.por.fl_str_mv |
Genetic variability Ralstonia solanacearum Solanum lycopersicum. Variabilidade genética Ralstonia solanacearu Solanum lycopersicum. |
topic |
Genetic variability Ralstonia solanacearum Solanum lycopersicum. Variabilidade genética Ralstonia solanacearu Solanum lycopersicum. |
description |
Bacterial wilt, caused by phytopathogenic species of the genus Ralstonia, is one of the main diseases affecting the tomato crop. The Ralstonia solanacearum species complex occurs as a result of variants being widely diverse in terms of adaptation to different climatic conditions, host variations, and aggressiveness, which complicate disease control recommendations. In this study, we employed molecular methods to analyze 26 R. solanacearum isolates collected from tomato plants cultivated in the southwest region of Paraná, Brazil. Isolates were obtained from plants exhibiting wilt symptoms in a protected cultivation system and in an open field. The specific primers 759/760 confirmed the isolates as part of the Ralstonia solanacearum complex, and Nmult primers were used to identify the phylotype. Variability analysis using BOX-PCR with the BOX-A1R primer on 19 isolates revealed molecular diversity. All 26 isolates were confirmed as Ralstonia solanacearum, belonging to phylotype II. Comparison of genomic DNA band patterns amplified by BOX-PCR indicated molecular variability, forming eight groups at a similarity level of 0.63. These results confirm the prevalence of R. solanacearum phylotype II in southwestern Paraná. This information aids decision-making in disease management and contributes to breeding efforts aiming at the development of resistant cultivars. |
publishDate |
2024 |
dc.date.none.fl_str_mv |
2024-01-30 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Avaliado por pares |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251 10.5433/1679-0359.2023v44n6p2249 |
url |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251 |
identifier_str_mv |
10.5433/1679-0359.2023v44n6p2249 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251/49972 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2024 Semina: Ciências Agrárias http://creativecommons.org/licenses/by-nc/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2024 Semina: Ciências Agrárias http://creativecommons.org/licenses/by-nc/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
UEL |
publisher.none.fl_str_mv |
UEL |
dc.source.none.fl_str_mv |
Semina: Ciências Agrárias; Vol. 44 No. 6 (2023); 2249-2258 Semina: Ciências Agrárias; v. 44 n. 6 (2023); 2249-2258 1679-0359 1676-546X reponame:Semina. Ciências Agrárias (Online) instname:Universidade Estadual de Londrina (UEL) instacron:UEL |
instname_str |
Universidade Estadual de Londrina (UEL) |
instacron_str |
UEL |
institution |
UEL |
reponame_str |
Semina. Ciências Agrárias (Online) |
collection |
Semina. Ciências Agrárias (Online) |
repository.name.fl_str_mv |
Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL) |
repository.mail.fl_str_mv |
semina.agrarias@uel.br |
_version_ |
1799306087181058048 |