Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná

Detalhes bibliográficos
Autor(a) principal: Zanon, Vanessa Casiraghi
Data de Publicação: 2024
Outros Autores: Kafer, João Matheus, Hagn, Jaqueline, Cardoso, Jessica, Dallemole-Giaretta, Rosangela, Finatto, Taciane, Vargas, Thiago de Oliveira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Semina. Ciências Agrárias (Online)
Texto Completo: https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251
Resumo: Bacterial wilt, caused by phytopathogenic species of the genus Ralstonia, is one of the main diseases affecting the tomato crop. The Ralstonia solanacearum species complex occurs as a result of variants being widely diverse in terms of adaptation to different climatic conditions, host variations, and aggressiveness, which complicate disease control recommendations. In this study, we employed molecular methods to analyze 26 R. solanacearum isolates collected from tomato plants cultivated in the southwest region of Paraná, Brazil. Isolates were obtained from plants exhibiting wilt symptoms in a protected cultivation system and in an open field. The specific primers 759/760 confirmed the isolates as part of the Ralstonia solanacearum complex, and Nmult primers were used to identify the phylotype. Variability analysis using BOX-PCR with the BOX-A1R primer on 19 isolates revealed molecular diversity. All 26 isolates were confirmed as Ralstonia solanacearum, belonging to phylotype II. Comparison of genomic DNA band patterns amplified by BOX-PCR indicated molecular variability, forming eight groups at a similarity level of 0.63. These results confirm the prevalence of R. solanacearum phylotype II in southwestern Paraná. This information aids decision-making in disease management and contributes to breeding efforts aiming at the development of resistant cultivars.  
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spelling Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern ParanáIdentificação molecular do agente causal da murcha bacteriana em plantas de tomateiro no sudoeste do ParanáGenetic variabilityRalstonia solanacearumSolanum lycopersicum.Variabilidade genéticaRalstonia solanacearuSolanum lycopersicum.Bacterial wilt, caused by phytopathogenic species of the genus Ralstonia, is one of the main diseases affecting the tomato crop. The Ralstonia solanacearum species complex occurs as a result of variants being widely diverse in terms of adaptation to different climatic conditions, host variations, and aggressiveness, which complicate disease control recommendations. In this study, we employed molecular methods to analyze 26 R. solanacearum isolates collected from tomato plants cultivated in the southwest region of Paraná, Brazil. Isolates were obtained from plants exhibiting wilt symptoms in a protected cultivation system and in an open field. The specific primers 759/760 confirmed the isolates as part of the Ralstonia solanacearum complex, and Nmult primers were used to identify the phylotype. Variability analysis using BOX-PCR with the BOX-A1R primer on 19 isolates revealed molecular diversity. All 26 isolates were confirmed as Ralstonia solanacearum, belonging to phylotype II. Comparison of genomic DNA band patterns amplified by BOX-PCR indicated molecular variability, forming eight groups at a similarity level of 0.63. These results confirm the prevalence of R. solanacearum phylotype II in southwestern Paraná. This information aids decision-making in disease management and contributes to breeding efforts aiming at the development of resistant cultivars.  A murcha bacteriana, causada por espécies fitopatogênicas do gênero Ralstonia, é uma das principais doenças do tomateiro. O complexo de espécies de Ralstonia solanacearum ocorre devido a variantes com alta diversidade em termos de adaptação a diferentes condições climáticas, variabilidade de hospedeiros e agressividade, características que interferem na recomendação para o controle da doença. Neste estudo foram analisados por métodos moleculares 26 isolados de R. solanacearum isolados de plantas de tomateiro cultivadas na região sudoeste do Paraná. Os isolados foram obtidos de plantas com sintomas de murcha cultivadas em sistema de cultivo protegido e campo aberto. Os iniciadores específicos 759/760 foram usados para confirmar que os isolados pertenciam ao complexo específico Ralstonia solanacearum e os iniciadores Nmult foram usados para identificar o filotipo. A análise de variabilidade foi realizada por BOX-PCR com o primer BOX-A1R para 19 isolados. Os vinte e seis isolados foram confirmados como Ralstonia solanacearum e pertencentes ao filotipo II. A comparação entre os padrões de bandas do DNA genômico amplificado por BOX-PCR demonstrou variabilidade molecular com a formação de oito grupos ao nível de 0,63 de similaridade. Esses resultados confirmam a predominância de R. solanacearum filotipo II no sudoeste do Paraná e auxiliam na tomada de decisões relacionadas ao manejo da doença, bem como no melhoramento genético para obtenção de cultivares resistentes.  UEL2024-01-30info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAvaliado por paresapplication/pdfhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/4825110.5433/1679-0359.2023v44n6p2249Semina: Ciências Agrárias; Vol. 44 No. 6 (2023); 2249-2258Semina: Ciências Agrárias; v. 44 n. 6 (2023); 2249-22581679-03591676-546Xreponame:Semina. Ciências Agrárias (Online)instname:Universidade Estadual de Londrina (UEL)instacron:UELenghttps://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251/49972Copyright (c) 2024 Semina: Ciências Agráriashttp://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessZanon, Vanessa CasiraghiKafer, João Matheus Hagn, JaquelineCardoso, Jessica Dallemole-Giaretta, RosangelaFinatto, Taciane Vargas, Thiago de Oliveira2024-02-07T18:55:10Zoai:ojs.pkp.sfu.ca:article/48251Revistahttp://www.uel.br/revistas/uel/index.php/semagrariasPUBhttps://ojs.uel.br/revistas/uel/index.php/semagrarias/oaisemina.agrarias@uel.br1679-03591676-546Xopendoar:2024-02-07T18:55:10Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)false
dc.title.none.fl_str_mv Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
Identificação molecular do agente causal da murcha bacteriana em plantas de tomateiro no sudoeste do Paraná
title Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
spellingShingle Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
Zanon, Vanessa Casiraghi
Genetic variability
Ralstonia solanacearum
Solanum lycopersicum.
Variabilidade genética
Ralstonia solanacearu
Solanum lycopersicum.
title_short Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
title_full Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
title_fullStr Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
title_full_unstemmed Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
title_sort Molecular identification of the causal agent of bacterial wilt in tomato plants in southwestern Paraná
author Zanon, Vanessa Casiraghi
author_facet Zanon, Vanessa Casiraghi
Kafer, João Matheus
Hagn, Jaqueline
Cardoso, Jessica
Dallemole-Giaretta, Rosangela
Finatto, Taciane
Vargas, Thiago de Oliveira
author_role author
author2 Kafer, João Matheus
Hagn, Jaqueline
Cardoso, Jessica
Dallemole-Giaretta, Rosangela
Finatto, Taciane
Vargas, Thiago de Oliveira
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Zanon, Vanessa Casiraghi
Kafer, João Matheus
Hagn, Jaqueline
Cardoso, Jessica
Dallemole-Giaretta, Rosangela
Finatto, Taciane
Vargas, Thiago de Oliveira
dc.subject.por.fl_str_mv Genetic variability
Ralstonia solanacearum
Solanum lycopersicum.
Variabilidade genética
Ralstonia solanacearu
Solanum lycopersicum.
topic Genetic variability
Ralstonia solanacearum
Solanum lycopersicum.
Variabilidade genética
Ralstonia solanacearu
Solanum lycopersicum.
description Bacterial wilt, caused by phytopathogenic species of the genus Ralstonia, is one of the main diseases affecting the tomato crop. The Ralstonia solanacearum species complex occurs as a result of variants being widely diverse in terms of adaptation to different climatic conditions, host variations, and aggressiveness, which complicate disease control recommendations. In this study, we employed molecular methods to analyze 26 R. solanacearum isolates collected from tomato plants cultivated in the southwest region of Paraná, Brazil. Isolates were obtained from plants exhibiting wilt symptoms in a protected cultivation system and in an open field. The specific primers 759/760 confirmed the isolates as part of the Ralstonia solanacearum complex, and Nmult primers were used to identify the phylotype. Variability analysis using BOX-PCR with the BOX-A1R primer on 19 isolates revealed molecular diversity. All 26 isolates were confirmed as Ralstonia solanacearum, belonging to phylotype II. Comparison of genomic DNA band patterns amplified by BOX-PCR indicated molecular variability, forming eight groups at a similarity level of 0.63. These results confirm the prevalence of R. solanacearum phylotype II in southwestern Paraná. This information aids decision-making in disease management and contributes to breeding efforts aiming at the development of resistant cultivars.  
publishDate 2024
dc.date.none.fl_str_mv 2024-01-30
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
Avaliado por pares
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251
10.5433/1679-0359.2023v44n6p2249
url https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251
identifier_str_mv 10.5433/1679-0359.2023v44n6p2249
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://ojs.uel.br/revistas/uel/index.php/semagrarias/article/view/48251/49972
dc.rights.driver.fl_str_mv Copyright (c) 2024 Semina: Ciências Agrárias
http://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2024 Semina: Ciências Agrárias
http://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv UEL
publisher.none.fl_str_mv UEL
dc.source.none.fl_str_mv Semina: Ciências Agrárias; Vol. 44 No. 6 (2023); 2249-2258
Semina: Ciências Agrárias; v. 44 n. 6 (2023); 2249-2258
1679-0359
1676-546X
reponame:Semina. Ciências Agrárias (Online)
instname:Universidade Estadual de Londrina (UEL)
instacron:UEL
instname_str Universidade Estadual de Londrina (UEL)
instacron_str UEL
institution UEL
reponame_str Semina. Ciências Agrárias (Online)
collection Semina. Ciências Agrárias (Online)
repository.name.fl_str_mv Semina. Ciências Agrárias (Online) - Universidade Estadual de Londrina (UEL)
repository.mail.fl_str_mv semina.agrarias@uel.br
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