Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines

Detalhes bibliográficos
Autor(a) principal: Cumagun, Christian Joseph Rili
Data de Publicação: 2019
Outros Autores: McDonald, Bruce Alan, Arakawa, Masao, Castroagudín, Vanina Lilian, Sebbenn, Alexandre Magno, Ceresini, Paulo Cezar
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Acta Scientiarum. Agronomy (Online)
Texto Completo: http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457
Resumo: Sheath blight, caused by the fungal pathogen Rhizoctonia solani AG-1 IA is one of the most important rice diseases worldwide. The objetives of this study was to determine the predominant reproductive system and the genetic structure of 18 rice-infecting populations of R. solani sampled from China, Japan and the Philippines, the most important rice production countries in Asia. Knowledge about the population genetic structure of the pathogen in Asia is useful in identifying sources of infection and formulating sustainable management strategies for rice sheath blight. From a total of 717 isolates, 423 unique multilocus genotypes were detected based on nine microsatellite loci. The three country populations of R. solani AG-1 IA exhibited a mixed reproductive system, which included both sexual and asexual components. A moderate degree of clonality indicated that the asexual sclerotia represent important source of inoculum. Population subdivision varied within and among countries, fitting the isolation by distance model. While no subdivision was found among populations within Japan or within the Philippines, subdivision was detected among populations within China. Historic migration indicated high influx of immigrants from Japan into Northern, Central and Eastern China populations. Southern China contributed a high number of immigrants to the populations from the Philippines.
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spelling Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the PhilippinesThanatephorus cucumerismicrosatellite genotypingreproductive systemgene flowmigration.Sheath blight, caused by the fungal pathogen Rhizoctonia solani AG-1 IA is one of the most important rice diseases worldwide. The objetives of this study was to determine the predominant reproductive system and the genetic structure of 18 rice-infecting populations of R. solani sampled from China, Japan and the Philippines, the most important rice production countries in Asia. Knowledge about the population genetic structure of the pathogen in Asia is useful in identifying sources of infection and formulating sustainable management strategies for rice sheath blight. From a total of 717 isolates, 423 unique multilocus genotypes were detected based on nine microsatellite loci. The three country populations of R. solani AG-1 IA exhibited a mixed reproductive system, which included both sexual and asexual components. A moderate degree of clonality indicated that the asexual sclerotia represent important source of inoculum. Population subdivision varied within and among countries, fitting the isolation by distance model. While no subdivision was found among populations within Japan or within the Philippines, subdivision was detected among populations within China. Historic migration indicated high influx of immigrants from Japan into Northern, Central and Eastern China populations. Southern China contributed a high number of immigrants to the populations from the Philippines.Universidade Estadual de Maringá2019-11-20info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/4245710.4025/actasciagron.v42i1.42457Acta Scientiarum. Agronomy; Vol 42 (2020): Publicação contínua; e42457Acta Scientiarum. Agronomy; v. 42 (2020): Publicação contínua; e424571807-86211679-9275reponame:Acta Scientiarum. Agronomy (Online)instname:Universidade Estadual de Maringá (UEM)instacron:UEMenghttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457/751375148982Copyright (c) 2020 Acta Scientiarum. Agronomyhttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessCumagun, Christian Joseph Rili McDonald, Bruce AlanArakawa, MasaoCastroagudín, Vanina LilianSebbenn, Alexandre MagnoCeresini, Paulo Cezar2020-11-16T18:51:03Zoai:periodicos.uem.br/ojs:article/42457Revistahttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgronPUBhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/oaiactaagron@uem.br||actaagron@uem.br|| edamasio@uem.br1807-86211679-9275opendoar:2020-11-16T18:51:03Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)false
dc.title.none.fl_str_mv Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
title Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
spellingShingle Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
Cumagun, Christian Joseph Rili
Thanatephorus cucumeris
microsatellite genotyping
reproductive system
gene flow
migration.
title_short Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
title_full Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
title_fullStr Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
title_full_unstemmed Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
title_sort Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
author Cumagun, Christian Joseph Rili
author_facet Cumagun, Christian Joseph Rili
McDonald, Bruce Alan
Arakawa, Masao
Castroagudín, Vanina Lilian
Sebbenn, Alexandre Magno
Ceresini, Paulo Cezar
author_role author
author2 McDonald, Bruce Alan
Arakawa, Masao
Castroagudín, Vanina Lilian
Sebbenn, Alexandre Magno
Ceresini, Paulo Cezar
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Cumagun, Christian Joseph Rili
McDonald, Bruce Alan
Arakawa, Masao
Castroagudín, Vanina Lilian
Sebbenn, Alexandre Magno
Ceresini, Paulo Cezar
dc.subject.por.fl_str_mv Thanatephorus cucumeris
microsatellite genotyping
reproductive system
gene flow
migration.
topic Thanatephorus cucumeris
microsatellite genotyping
reproductive system
gene flow
migration.
description Sheath blight, caused by the fungal pathogen Rhizoctonia solani AG-1 IA is one of the most important rice diseases worldwide. The objetives of this study was to determine the predominant reproductive system and the genetic structure of 18 rice-infecting populations of R. solani sampled from China, Japan and the Philippines, the most important rice production countries in Asia. Knowledge about the population genetic structure of the pathogen in Asia is useful in identifying sources of infection and formulating sustainable management strategies for rice sheath blight. From a total of 717 isolates, 423 unique multilocus genotypes were detected based on nine microsatellite loci. The three country populations of R. solani AG-1 IA exhibited a mixed reproductive system, which included both sexual and asexual components. A moderate degree of clonality indicated that the asexual sclerotia represent important source of inoculum. Population subdivision varied within and among countries, fitting the isolation by distance model. While no subdivision was found among populations within Japan or within the Philippines, subdivision was detected among populations within China. Historic migration indicated high influx of immigrants from Japan into Northern, Central and Eastern China populations. Southern China contributed a high number of immigrants to the populations from the Philippines.
publishDate 2019
dc.date.none.fl_str_mv 2019-11-20
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457
10.4025/actasciagron.v42i1.42457
url http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457
identifier_str_mv 10.4025/actasciagron.v42i1.42457
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457/751375148982
dc.rights.driver.fl_str_mv Copyright (c) 2020 Acta Scientiarum. Agronomy
https://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2020 Acta Scientiarum. Agronomy
https://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Estadual de Maringá
publisher.none.fl_str_mv Universidade Estadual de Maringá
dc.source.none.fl_str_mv Acta Scientiarum. Agronomy; Vol 42 (2020): Publicação contínua; e42457
Acta Scientiarum. Agronomy; v. 42 (2020): Publicação contínua; e42457
1807-8621
1679-9275
reponame:Acta Scientiarum. Agronomy (Online)
instname:Universidade Estadual de Maringá (UEM)
instacron:UEM
instname_str Universidade Estadual de Maringá (UEM)
instacron_str UEM
institution UEM
reponame_str Acta Scientiarum. Agronomy (Online)
collection Acta Scientiarum. Agronomy (Online)
repository.name.fl_str_mv Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)
repository.mail.fl_str_mv actaagron@uem.br||actaagron@uem.br|| edamasio@uem.br
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