Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Acta Scientiarum. Agronomy (Online) |
Texto Completo: | http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457 |
Resumo: | Sheath blight, caused by the fungal pathogen Rhizoctonia solani AG-1 IA is one of the most important rice diseases worldwide. The objetives of this study was to determine the predominant reproductive system and the genetic structure of 18 rice-infecting populations of R. solani sampled from China, Japan and the Philippines, the most important rice production countries in Asia. Knowledge about the population genetic structure of the pathogen in Asia is useful in identifying sources of infection and formulating sustainable management strategies for rice sheath blight. From a total of 717 isolates, 423 unique multilocus genotypes were detected based on nine microsatellite loci. The three country populations of R. solani AG-1 IA exhibited a mixed reproductive system, which included both sexual and asexual components. A moderate degree of clonality indicated that the asexual sclerotia represent important source of inoculum. Population subdivision varied within and among countries, fitting the isolation by distance model. While no subdivision was found among populations within Japan or within the Philippines, subdivision was detected among populations within China. Historic migration indicated high influx of immigrants from Japan into Northern, Central and Eastern China populations. Southern China contributed a high number of immigrants to the populations from the Philippines. |
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Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the PhilippinesThanatephorus cucumerismicrosatellite genotypingreproductive systemgene flowmigration.Sheath blight, caused by the fungal pathogen Rhizoctonia solani AG-1 IA is one of the most important rice diseases worldwide. The objetives of this study was to determine the predominant reproductive system and the genetic structure of 18 rice-infecting populations of R. solani sampled from China, Japan and the Philippines, the most important rice production countries in Asia. Knowledge about the population genetic structure of the pathogen in Asia is useful in identifying sources of infection and formulating sustainable management strategies for rice sheath blight. From a total of 717 isolates, 423 unique multilocus genotypes were detected based on nine microsatellite loci. The three country populations of R. solani AG-1 IA exhibited a mixed reproductive system, which included both sexual and asexual components. A moderate degree of clonality indicated that the asexual sclerotia represent important source of inoculum. Population subdivision varied within and among countries, fitting the isolation by distance model. While no subdivision was found among populations within Japan or within the Philippines, subdivision was detected among populations within China. Historic migration indicated high influx of immigrants from Japan into Northern, Central and Eastern China populations. Southern China contributed a high number of immigrants to the populations from the Philippines.Universidade Estadual de Maringá2019-11-20info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/4245710.4025/actasciagron.v42i1.42457Acta Scientiarum. Agronomy; Vol 42 (2020): Publicação contínua; e42457Acta Scientiarum. Agronomy; v. 42 (2020): Publicação contínua; e424571807-86211679-9275reponame:Acta Scientiarum. Agronomy (Online)instname:Universidade Estadual de Maringá (UEM)instacron:UEMenghttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457/751375148982Copyright (c) 2020 Acta Scientiarum. Agronomyhttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessCumagun, Christian Joseph Rili McDonald, Bruce AlanArakawa, MasaoCastroagudín, Vanina LilianSebbenn, Alexandre MagnoCeresini, Paulo Cezar2020-11-16T18:51:03Zoai:periodicos.uem.br/ojs:article/42457Revistahttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgronPUBhttp://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/oaiactaagron@uem.br||actaagron@uem.br|| edamasio@uem.br1807-86211679-9275opendoar:2020-11-16T18:51:03Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM)false |
dc.title.none.fl_str_mv |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
title |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
spellingShingle |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines Cumagun, Christian Joseph Rili Thanatephorus cucumeris microsatellite genotyping reproductive system gene flow migration. |
title_short |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
title_full |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
title_fullStr |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
title_full_unstemmed |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
title_sort |
Population genetic structure of the sheath blight pathogen Rhizoctonia solani AG-1 IA from rice fields in China, Japan and the Philippines |
author |
Cumagun, Christian Joseph Rili |
author_facet |
Cumagun, Christian Joseph Rili McDonald, Bruce Alan Arakawa, Masao Castroagudín, Vanina Lilian Sebbenn, Alexandre Magno Ceresini, Paulo Cezar |
author_role |
author |
author2 |
McDonald, Bruce Alan Arakawa, Masao Castroagudín, Vanina Lilian Sebbenn, Alexandre Magno Ceresini, Paulo Cezar |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Cumagun, Christian Joseph Rili McDonald, Bruce Alan Arakawa, Masao Castroagudín, Vanina Lilian Sebbenn, Alexandre Magno Ceresini, Paulo Cezar |
dc.subject.por.fl_str_mv |
Thanatephorus cucumeris microsatellite genotyping reproductive system gene flow migration. |
topic |
Thanatephorus cucumeris microsatellite genotyping reproductive system gene flow migration. |
description |
Sheath blight, caused by the fungal pathogen Rhizoctonia solani AG-1 IA is one of the most important rice diseases worldwide. The objetives of this study was to determine the predominant reproductive system and the genetic structure of 18 rice-infecting populations of R. solani sampled from China, Japan and the Philippines, the most important rice production countries in Asia. Knowledge about the population genetic structure of the pathogen in Asia is useful in identifying sources of infection and formulating sustainable management strategies for rice sheath blight. From a total of 717 isolates, 423 unique multilocus genotypes were detected based on nine microsatellite loci. The three country populations of R. solani AG-1 IA exhibited a mixed reproductive system, which included both sexual and asexual components. A moderate degree of clonality indicated that the asexual sclerotia represent important source of inoculum. Population subdivision varied within and among countries, fitting the isolation by distance model. While no subdivision was found among populations within Japan or within the Philippines, subdivision was detected among populations within China. Historic migration indicated high influx of immigrants from Japan into Northern, Central and Eastern China populations. Southern China contributed a high number of immigrants to the populations from the Philippines. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-11-20 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457 10.4025/actasciagron.v42i1.42457 |
url |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457 |
identifier_str_mv |
10.4025/actasciagron.v42i1.42457 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
http://www.periodicos.uem.br/ojs/index.php/ActaSciAgron/article/view/42457/751375148982 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2020 Acta Scientiarum. Agronomy https://creativecommons.org/licenses/by/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2020 Acta Scientiarum. Agronomy https://creativecommons.org/licenses/by/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Estadual de Maringá |
publisher.none.fl_str_mv |
Universidade Estadual de Maringá |
dc.source.none.fl_str_mv |
Acta Scientiarum. Agronomy; Vol 42 (2020): Publicação contínua; e42457 Acta Scientiarum. Agronomy; v. 42 (2020): Publicação contínua; e42457 1807-8621 1679-9275 reponame:Acta Scientiarum. Agronomy (Online) instname:Universidade Estadual de Maringá (UEM) instacron:UEM |
instname_str |
Universidade Estadual de Maringá (UEM) |
instacron_str |
UEM |
institution |
UEM |
reponame_str |
Acta Scientiarum. Agronomy (Online) |
collection |
Acta Scientiarum. Agronomy (Online) |
repository.name.fl_str_mv |
Acta Scientiarum. Agronomy (Online) - Universidade Estadual de Maringá (UEM) |
repository.mail.fl_str_mv |
actaagron@uem.br||actaagron@uem.br|| edamasio@uem.br |
_version_ |
1799305910596665344 |