Statistical model assumptions achieved by linear models: classics and generalized mixed

Detalhes bibliográficos
Autor(a) principal: Melo,Rita Carolina de
Data de Publicação: 2020
Outros Autores: Trevisani,Nicole, Santos,Marcio dos, Guidolin,Altamir Frederico, Coimbra,Jefferson Luís Meirelles
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista ciência agronômica (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-66902020000100415
Resumo: ABSTRACT When an agricultural experiment is completed and the data about the response variable is available, it is necessary to perform an analysis of variance. However, the hypothesis testing of this analysis shows validity only if the assumptions of the statistical model are ensured. When such assumptions are violated, procedures must be applied to remedy the problem. The present study aimed to compare and investigate how the assumptions of the statistical model can be achieved by classical linear model and generalized linear mixed model, as well as their impact on the hypothesis test of the analysis of variance. The data used in this study was obtained from a genetic breeding program on the cooking time of segregating populations. The following solutions were proposed: i) Classical linear model with data transformation and ii) Generalized linear mixed models. The assumptions of normality and homogeneity were tested by Shapiro-Wilk and Levene, respectively. Both models were able to achieve the assumptions of the statistical model with direct impact on the hypothesis testing. The data transformations were effective in stabilizing the variance. However, several inappropriate transformations can be misapplied and meet the assumptions, which would distort the hypothesis test. The generalized linear mixed models may require more knowledge about the identification of lines of programming, compared to the classical method. However, besides the separation of fixed from random effects, they allow for the specification of the type of distribution of the response variable and the structuring of the residues.
id UFC-2_24de6399654d8ca4276ac797a4324532
oai_identifier_str oai:scielo:S1806-66902020000100415
network_acronym_str UFC-2
network_name_str Revista ciência agronômica (Online)
repository_id_str
spelling Statistical model assumptions achieved by linear models: classics and generalized mixedAnalysis of varianceHomogeneity of varianceNormality of errorsCrop breedingGeneralized linear mixed modelsABSTRACT When an agricultural experiment is completed and the data about the response variable is available, it is necessary to perform an analysis of variance. However, the hypothesis testing of this analysis shows validity only if the assumptions of the statistical model are ensured. When such assumptions are violated, procedures must be applied to remedy the problem. The present study aimed to compare and investigate how the assumptions of the statistical model can be achieved by classical linear model and generalized linear mixed model, as well as their impact on the hypothesis test of the analysis of variance. The data used in this study was obtained from a genetic breeding program on the cooking time of segregating populations. The following solutions were proposed: i) Classical linear model with data transformation and ii) Generalized linear mixed models. The assumptions of normality and homogeneity were tested by Shapiro-Wilk and Levene, respectively. Both models were able to achieve the assumptions of the statistical model with direct impact on the hypothesis testing. The data transformations were effective in stabilizing the variance. However, several inappropriate transformations can be misapplied and meet the assumptions, which would distort the hypothesis test. The generalized linear mixed models may require more knowledge about the identification of lines of programming, compared to the classical method. However, besides the separation of fixed from random effects, they allow for the specification of the type of distribution of the response variable and the structuring of the residues.Universidade Federal do Ceará2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-66902020000100415Revista Ciência Agronômica v.51 n.1 2020reponame:Revista ciência agronômica (Online)instname:Universidade Federal do Ceará (UFC)instacron:UFC10.5935/1806-6690.20200015info:eu-repo/semantics/openAccessMelo,Rita Carolina deTrevisani,NicoleSantos,Marcio dosGuidolin,Altamir FredericoCoimbra,Jefferson Luís Meirelleseng2020-02-10T00:00:00Zoai:scielo:S1806-66902020000100415Revistahttp://www.ccarevista.ufc.br/PUBhttps://old.scielo.br/oai/scielo-oai.php||alekdutra@ufc.br|| ccarev@ufc.br1806-66900045-6888opendoar:2020-02-10T00:00Revista ciência agronômica (Online) - Universidade Federal do Ceará (UFC)false
dc.title.none.fl_str_mv Statistical model assumptions achieved by linear models: classics and generalized mixed
title Statistical model assumptions achieved by linear models: classics and generalized mixed
spellingShingle Statistical model assumptions achieved by linear models: classics and generalized mixed
Melo,Rita Carolina de
Analysis of variance
Homogeneity of variance
Normality of errors
Crop breeding
Generalized linear mixed models
title_short Statistical model assumptions achieved by linear models: classics and generalized mixed
title_full Statistical model assumptions achieved by linear models: classics and generalized mixed
title_fullStr Statistical model assumptions achieved by linear models: classics and generalized mixed
title_full_unstemmed Statistical model assumptions achieved by linear models: classics and generalized mixed
title_sort Statistical model assumptions achieved by linear models: classics and generalized mixed
author Melo,Rita Carolina de
author_facet Melo,Rita Carolina de
Trevisani,Nicole
Santos,Marcio dos
Guidolin,Altamir Frederico
Coimbra,Jefferson Luís Meirelles
author_role author
author2 Trevisani,Nicole
Santos,Marcio dos
Guidolin,Altamir Frederico
Coimbra,Jefferson Luís Meirelles
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Melo,Rita Carolina de
Trevisani,Nicole
Santos,Marcio dos
Guidolin,Altamir Frederico
Coimbra,Jefferson Luís Meirelles
dc.subject.por.fl_str_mv Analysis of variance
Homogeneity of variance
Normality of errors
Crop breeding
Generalized linear mixed models
topic Analysis of variance
Homogeneity of variance
Normality of errors
Crop breeding
Generalized linear mixed models
description ABSTRACT When an agricultural experiment is completed and the data about the response variable is available, it is necessary to perform an analysis of variance. However, the hypothesis testing of this analysis shows validity only if the assumptions of the statistical model are ensured. When such assumptions are violated, procedures must be applied to remedy the problem. The present study aimed to compare and investigate how the assumptions of the statistical model can be achieved by classical linear model and generalized linear mixed model, as well as their impact on the hypothesis test of the analysis of variance. The data used in this study was obtained from a genetic breeding program on the cooking time of segregating populations. The following solutions were proposed: i) Classical linear model with data transformation and ii) Generalized linear mixed models. The assumptions of normality and homogeneity were tested by Shapiro-Wilk and Levene, respectively. Both models were able to achieve the assumptions of the statistical model with direct impact on the hypothesis testing. The data transformations were effective in stabilizing the variance. However, several inappropriate transformations can be misapplied and meet the assumptions, which would distort the hypothesis test. The generalized linear mixed models may require more knowledge about the identification of lines of programming, compared to the classical method. However, besides the separation of fixed from random effects, they allow for the specification of the type of distribution of the response variable and the structuring of the residues.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-66902020000100415
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-66902020000100415
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.5935/1806-6690.20200015
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Universidade Federal do Ceará
publisher.none.fl_str_mv Universidade Federal do Ceará
dc.source.none.fl_str_mv Revista Ciência Agronômica v.51 n.1 2020
reponame:Revista ciência agronômica (Online)
instname:Universidade Federal do Ceará (UFC)
instacron:UFC
instname_str Universidade Federal do Ceará (UFC)
instacron_str UFC
institution UFC
reponame_str Revista ciência agronômica (Online)
collection Revista ciência agronômica (Online)
repository.name.fl_str_mv Revista ciência agronômica (Online) - Universidade Federal do Ceará (UFC)
repository.mail.fl_str_mv ||alekdutra@ufc.br|| ccarev@ufc.br
_version_ 1750297489803575296