Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae

Detalhes bibliográficos
Autor(a) principal: Vasconcelos, Thais N. C.
Data de Publicação: 2017
Outros Autores: Proença, Carol E. B., Ahmad, Berhaman, Aguilar, Daniel S., Aguilar, Reinaldo, Amorim, Bruno S., Campbell, Keron, Costa, Itayguara R., Carvalho, Plauto S. De, Faria, Jair E. Q., Giaretta, Augusto, Kooij, Pepijn W., Lima, Duane F., Mazine, Fiorella F., Peguero, Brigido, Prenner, Gerhard, Santos, Matheus F., Soewarto, Julia, Wingler, Astrid, Lucas, Eve J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da Universidade Federal do Ceará (UFC)
Texto Completo: http://www.repositorio.ufc.br/handle/riufc/63277
Resumo: Myrteae (c. 2500 species; 51 genera) is the largest tribe of Myrtaceae and an ecologically important groups of angiosperms in the Neotropics. Systematic relationships in Myrteae are complex, hindering conservation initiatives and jeopardizing evolutionary modelling. A well-supported and robust phylogenetic hypothesis was here targeted towards a comprehensive understanding of the relationships within the tribe. The resultant topology was used as a base for key evolutionary analyses such as age estimation, historical biogeography and diversification rate patterns. One nuclear (ITS) and seven chloroplast (psbA-trnH, matK, ndhF, trnl-trnF, trnQ-rps16, rpl16 and rpl32-trnL) DNA regions for 115 taxa representing 46 out of the 51 genera in the tribe were accessed and analysed using maximum likelihood and Bayesian inference tools for phylogenetic reconstruction. Dates of diversification events were estimated and contrasted using two distinct fossil sets (macro and pollen) in BEAST. The subsequent dated phylogenies were compared and analysed for biogeographical patterns using BioGeoBEARS and diversification rates using BAMM. Myrteae phylogeny presents strong statistical support for three major clades within the tribe: Australasian group, Myrtus group and Main Neotropical Lineage. Dating results from calibration using macrofossil are an average of 20 million years older and show an early Paleocene origin of Myrteae, against a mid-Eocene one from the pollen fossil calibration. Biogeographic analysis shows the origin of Myrteae in Zealandia in both calibration approaches, followed by a widespread distribution throughout the still-linked Gondwana continents and diversification of Neotropical endemic lineages by later vicariance. Best configuration shift indicates three points of acceleration in diversification rates, all of them occurring in the Main Neotropical Lineage. Based on the reconstructed topology, several new taxonomic placements were recovered, including: the relative position of Myrtus communis, the placement of the Blepharocalyx group, the absence of generic endemism in the Caribbean, and the paraphyletism of the former Pimenta group. Distinct calibration approaches affect biogeography interpretation, increasing the number of necessary long distance dispersal events in the topology with older nodes. It is hypothesised that biological intrinsic factors such as modifications of embryo type and polyploidy might have played a role in accelerating shifts of diversification rates in Neotropical lineages. Future perspectives include formal subtribal classification, standardization of fossil calibration approaches and better links between diversification shifts and trait evolution.
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spelling Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of MyrtaceaeEugeniaEvolutionMyrciaMyrtusPsidiumSystematicsMyrteae (c. 2500 species; 51 genera) is the largest tribe of Myrtaceae and an ecologically important groups of angiosperms in the Neotropics. Systematic relationships in Myrteae are complex, hindering conservation initiatives and jeopardizing evolutionary modelling. A well-supported and robust phylogenetic hypothesis was here targeted towards a comprehensive understanding of the relationships within the tribe. The resultant topology was used as a base for key evolutionary analyses such as age estimation, historical biogeography and diversification rate patterns. One nuclear (ITS) and seven chloroplast (psbA-trnH, matK, ndhF, trnl-trnF, trnQ-rps16, rpl16 and rpl32-trnL) DNA regions for 115 taxa representing 46 out of the 51 genera in the tribe were accessed and analysed using maximum likelihood and Bayesian inference tools for phylogenetic reconstruction. Dates of diversification events were estimated and contrasted using two distinct fossil sets (macro and pollen) in BEAST. The subsequent dated phylogenies were compared and analysed for biogeographical patterns using BioGeoBEARS and diversification rates using BAMM. Myrteae phylogeny presents strong statistical support for three major clades within the tribe: Australasian group, Myrtus group and Main Neotropical Lineage. Dating results from calibration using macrofossil are an average of 20 million years older and show an early Paleocene origin of Myrteae, against a mid-Eocene one from the pollen fossil calibration. Biogeographic analysis shows the origin of Myrteae in Zealandia in both calibration approaches, followed by a widespread distribution throughout the still-linked Gondwana continents and diversification of Neotropical endemic lineages by later vicariance. Best configuration shift indicates three points of acceleration in diversification rates, all of them occurring in the Main Neotropical Lineage. Based on the reconstructed topology, several new taxonomic placements were recovered, including: the relative position of Myrtus communis, the placement of the Blepharocalyx group, the absence of generic endemism in the Caribbean, and the paraphyletism of the former Pimenta group. Distinct calibration approaches affect biogeography interpretation, increasing the number of necessary long distance dispersal events in the topology with older nodes. It is hypothesised that biological intrinsic factors such as modifications of embryo type and polyploidy might have played a role in accelerating shifts of diversification rates in Neotropical lineages. Future perspectives include formal subtribal classification, standardization of fossil calibration approaches and better links between diversification shifts and trait evolution.Molecular Phylogenetics and Evolution2021-12-30T20:12:24Z2021-12-30T20:12:24Z2017info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfVASCONCELOS, Thais N C et al. Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae. Molecular Phylogenetics and Evolution, [s. l.], v. 109, p. 113-137, 2017.http://www.repositorio.ufc.br/handle/riufc/63277Vasconcelos, Thais N. C.Proença, Carol E. B.Ahmad, BerhamanAguilar, Daniel S.Aguilar, ReinaldoAmorim, Bruno S.Campbell, KeronCosta, Itayguara R.Carvalho, Plauto S. DeFaria, Jair E. Q.Giaretta, AugustoKooij, Pepijn W.Lima, Duane F.Mazine, Fiorella F.Peguero, BrigidoPrenner, GerhardSantos, Matheus F.Soewarto, JuliaWingler, AstridLucas, Eve J.info:eu-repo/semantics/openAccessengreponame:Repositório Institucional da Universidade Federal do Ceará (UFC)instname:Universidade Federal do Ceará (UFC)instacron:UFC2023-10-10T19:38:54Zoai:repositorio.ufc.br:riufc/63277Repositório InstitucionalPUBhttp://www.repositorio.ufc.br/ri-oai/requestbu@ufc.br || repositorio@ufc.bropendoar:2024-09-11T18:47:34.409659Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)false
dc.title.none.fl_str_mv Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
title Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
spellingShingle Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
Vasconcelos, Thais N. C.
Eugenia
Evolution
Myrcia
Myrtus
Psidium
Systematics
title_short Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
title_full Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
title_fullStr Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
title_full_unstemmed Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
title_sort Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae
author Vasconcelos, Thais N. C.
author_facet Vasconcelos, Thais N. C.
Proença, Carol E. B.
Ahmad, Berhaman
Aguilar, Daniel S.
Aguilar, Reinaldo
Amorim, Bruno S.
Campbell, Keron
Costa, Itayguara R.
Carvalho, Plauto S. De
Faria, Jair E. Q.
Giaretta, Augusto
Kooij, Pepijn W.
Lima, Duane F.
Mazine, Fiorella F.
Peguero, Brigido
Prenner, Gerhard
Santos, Matheus F.
Soewarto, Julia
Wingler, Astrid
Lucas, Eve J.
author_role author
author2 Proença, Carol E. B.
Ahmad, Berhaman
Aguilar, Daniel S.
Aguilar, Reinaldo
Amorim, Bruno S.
Campbell, Keron
Costa, Itayguara R.
Carvalho, Plauto S. De
Faria, Jair E. Q.
Giaretta, Augusto
Kooij, Pepijn W.
Lima, Duane F.
Mazine, Fiorella F.
Peguero, Brigido
Prenner, Gerhard
Santos, Matheus F.
Soewarto, Julia
Wingler, Astrid
Lucas, Eve J.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Vasconcelos, Thais N. C.
Proença, Carol E. B.
Ahmad, Berhaman
Aguilar, Daniel S.
Aguilar, Reinaldo
Amorim, Bruno S.
Campbell, Keron
Costa, Itayguara R.
Carvalho, Plauto S. De
Faria, Jair E. Q.
Giaretta, Augusto
Kooij, Pepijn W.
Lima, Duane F.
Mazine, Fiorella F.
Peguero, Brigido
Prenner, Gerhard
Santos, Matheus F.
Soewarto, Julia
Wingler, Astrid
Lucas, Eve J.
dc.subject.por.fl_str_mv Eugenia
Evolution
Myrcia
Myrtus
Psidium
Systematics
topic Eugenia
Evolution
Myrcia
Myrtus
Psidium
Systematics
description Myrteae (c. 2500 species; 51 genera) is the largest tribe of Myrtaceae and an ecologically important groups of angiosperms in the Neotropics. Systematic relationships in Myrteae are complex, hindering conservation initiatives and jeopardizing evolutionary modelling. A well-supported and robust phylogenetic hypothesis was here targeted towards a comprehensive understanding of the relationships within the tribe. The resultant topology was used as a base for key evolutionary analyses such as age estimation, historical biogeography and diversification rate patterns. One nuclear (ITS) and seven chloroplast (psbA-trnH, matK, ndhF, trnl-trnF, trnQ-rps16, rpl16 and rpl32-trnL) DNA regions for 115 taxa representing 46 out of the 51 genera in the tribe were accessed and analysed using maximum likelihood and Bayesian inference tools for phylogenetic reconstruction. Dates of diversification events were estimated and contrasted using two distinct fossil sets (macro and pollen) in BEAST. The subsequent dated phylogenies were compared and analysed for biogeographical patterns using BioGeoBEARS and diversification rates using BAMM. Myrteae phylogeny presents strong statistical support for three major clades within the tribe: Australasian group, Myrtus group and Main Neotropical Lineage. Dating results from calibration using macrofossil are an average of 20 million years older and show an early Paleocene origin of Myrteae, against a mid-Eocene one from the pollen fossil calibration. Biogeographic analysis shows the origin of Myrteae in Zealandia in both calibration approaches, followed by a widespread distribution throughout the still-linked Gondwana continents and diversification of Neotropical endemic lineages by later vicariance. Best configuration shift indicates three points of acceleration in diversification rates, all of them occurring in the Main Neotropical Lineage. Based on the reconstructed topology, several new taxonomic placements were recovered, including: the relative position of Myrtus communis, the placement of the Blepharocalyx group, the absence of generic endemism in the Caribbean, and the paraphyletism of the former Pimenta group. Distinct calibration approaches affect biogeography interpretation, increasing the number of necessary long distance dispersal events in the topology with older nodes. It is hypothesised that biological intrinsic factors such as modifications of embryo type and polyploidy might have played a role in accelerating shifts of diversification rates in Neotropical lineages. Future perspectives include formal subtribal classification, standardization of fossil calibration approaches and better links between diversification shifts and trait evolution.
publishDate 2017
dc.date.none.fl_str_mv 2017
2021-12-30T20:12:24Z
2021-12-30T20:12:24Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv VASCONCELOS, Thais N C et al. Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae. Molecular Phylogenetics and Evolution, [s. l.], v. 109, p. 113-137, 2017.
http://www.repositorio.ufc.br/handle/riufc/63277
identifier_str_mv VASCONCELOS, Thais N C et al. Myrteae phylogeny, calibration, biogeography and diversification patterns: Increased understanding in the most species rich tribe of Myrtaceae. Molecular Phylogenetics and Evolution, [s. l.], v. 109, p. 113-137, 2017.
url http://www.repositorio.ufc.br/handle/riufc/63277
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Molecular Phylogenetics and Evolution
publisher.none.fl_str_mv Molecular Phylogenetics and Evolution
dc.source.none.fl_str_mv reponame:Repositório Institucional da Universidade Federal do Ceará (UFC)
instname:Universidade Federal do Ceará (UFC)
instacron:UFC
instname_str Universidade Federal do Ceará (UFC)
instacron_str UFC
institution UFC
reponame_str Repositório Institucional da Universidade Federal do Ceará (UFC)
collection Repositório Institucional da Universidade Federal do Ceará (UFC)
repository.name.fl_str_mv Repositório Institucional da Universidade Federal do Ceará (UFC) - Universidade Federal do Ceará (UFC)
repository.mail.fl_str_mv bu@ufc.br || repositorio@ufc.br
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