Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma

Detalhes bibliográficos
Autor(a) principal: Sarah Carvalho de Alencar Sampaio
Data de Publicação: 2015
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFC
Texto Completo: http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=15775
Resumo: To identify high-risk HPV genotypes in liquid-based cytology smears(SurePathÂ) with diagnosis of squamous atypia and squamous carcinoma. METHODS: This was a cross-sectional study using 165 liquid-based cytology with squamous atypia and 149 without atypia. HPV genotyping by real-time PCR was performed on this material. The material was processed by COBASÂ 4800 System (Roche), which has three detection channels: HPV 16, HPV 18, and HPV HR (other twelve high-risk genotypes). RESULTS:We analyzed 75 cases of ASC-US, 62 LSIL, 8 ASC-H, 12 HSIL and 8 squamous carcinomas. The average age was 32.2 years in the group without atypia, 31.1 years for ASC-US and LSIL, 41.2 years for ASC-H and HSIL and 43.1 years for SCC. There were 112 positive cases for HPV (68%) in the group with atypia: 72% positive for HPV AR, 18% of HPV16 and 10% of HPV 18. Only in ASC-US group, HPV positive and negative frequency was similar (1:1). In the others, the amount of HPV positive cases surpassed negative ones. In the group of Cytology without atypia were found 40 positive cases for HPV (26%): 68% positive for HPV AR probe, 17% of HPV18 and 15% of HPV16. Detections by a single probe predominated in both groups (88% and 84%). In the group with atypia the most prevalent combination was HPV16 and HPV HR (57%); and in cases without atypia was HPV18 and HPV HR (68%) and there was a single positive case for three channels in this group. CONCLUSIONS: The prevalence of other 12 high-risk HPV genotypes (not 16 and 18), was frequent in cytology with and without squamous atypia, associated or not with genotypes 16 and 18. The connection of squamous atypia with HPV 16 and HPV HR was significant. The data obtained are in agreement with the literature regarding the existence of heterogeneity in the distribution of different genotypes and their most frequent association as the level of atypia.
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spelling info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisIdentification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinomaIdentificaÃÃo de HPV de alto risco oncogÃnico em citologia em meio lÃquido com atipias escamosas e carcinoma escamoso2015-03-04Josà EleutÃrio JÃnior21126402320Paulo Roberto Carvalho de Almeida11969130300http://buscatextual.cnpq.br/buscatextual/visualizacv.jsp?id=K4702849Y9Ana Katherine da Silveira GonÃalves de Oliveira42252725400http://lattes.cnpq.br/3436756337251449Raquel Autran Coelho76768104349http://lattes.cnpq.br/2859195772390069 8451823530 http://lattes.cnpq.br/0813708453638097Sarah Carvalho de Alencar SampaioUniversidade Federal do CearÃPrograma de PÃs-GraduaÃÃo em PatologiaUFCBRANATOMIA PATOLOGICA E PATOLOGIA CLINICATo identify high-risk HPV genotypes in liquid-based cytology smears(SurePathÂ) with diagnosis of squamous atypia and squamous carcinoma. METHODS: This was a cross-sectional study using 165 liquid-based cytology with squamous atypia and 149 without atypia. HPV genotyping by real-time PCR was performed on this material. The material was processed by COBAS 4800 System (Roche), which has three detection channels: HPV 16, HPV 18, and HPV HR (other twelve high-risk genotypes). RESULTS:We analyzed 75 cases of ASC-US, 62 LSIL, 8 ASC-H, 12 HSIL and 8 squamous carcinomas. The average age was 32.2 years in the group without atypia, 31.1 years for ASC-US and LSIL, 41.2 years for ASC-H and HSIL and 43.1 years for SCC. There were 112 positive cases for HPV (68%) in the group with atypia: 72% positive for HPV AR, 18% of HPV16 and 10% of HPV 18. Only in ASC-US group, HPV positive and negative frequency was similar (1:1). In the others, the amount of HPV positive cases surpassed negative ones. In the group of Cytology without atypia were found 40 positive cases for HPV (26%): 68% positive for HPV AR probe, 17% of HPV18 and 15% of HPV16. Detections by a single probe predominated in both groups (88% and 84%). In the group with atypia the most prevalent combination was HPV16 and HPV HR (57%); and in cases without atypia was HPV18 and HPV HR (68%) and there was a single positive case for three channels in this group. CONCLUSIONS: The prevalence of other 12 high-risk HPV genotypes (not 16 and 18), was frequent in cytology with and without squamous atypia, associated or not with genotypes 16 and 18. The connection of squamous atypia with HPV 16 and HPV HR was significant. The data obtained are in agreement with the literature regarding the existence of heterogeneity in the distribution of different genotypes and their most frequent association as the level of atypia.Identificar genÃtipos de HPV de alto risco em citologias em meio lÃquido com diagnÃstico de atipias escamosas e carcinoma escamoso. MÃTODOS: Foi realizado estudo de corte transversal utilizando 165 citologias em meio lÃquido com atipias escamosas e 149 sem atipias. Nesse material foi realizado genotipagem do HPV por PCR em tempo real. O material foi processado pelo Sistema Cobas 4800 (Roche), que apresenta trÃs canais de detecÃÃo, para HPV 16, HPV 18, e HPV AR (outros doze genÃtipos de HPV de alto risco). RESULTADOS: Foram analisados 75 casos de ASC-US, 62 LSIL, 8 ASC-H, 12 HSIL e 8 carcinomas escamosos. A mÃdia etÃria foi de 32,2 anos no grupo sem atipias, 31,1 anos para ASC-US e LSIL, 41,2 anos para ASC-H e HSIL e 43,1 anos para CEC. Houve 112 casos positivos para HPV (68%) no grupo com atipias, sendo 72% de positividade para HPV AR, 18% de HPV 16 e 10% de HPV 18. Somente nos casos de ASC-US a frequÃncia de HPV positivo e negativo foi semelhante (1:1). Nas demais, a quantidade de casos HPV positivo ultrapassou a de negativos. No grupo de citologias sem atipias, foram encontrados 40 casos positivos para HPV (26%), sendo 68% de positividade para a sonda HPV AR, 17% de HPV 18 e 15% de HPV16. Predominaram detecÃÃes por uma Ãnica sonda em ambos os grupos (88% e 84%). No grupo com atipias, a combinaÃÃo mais presente foi HPV AR e 16 (57%); e nos casos sem atipias, foi HPV AR e 18 (68%) e houve um Ãnico caso positivo para os trÃs canais neste grupo. CONCLUSÃES: A prevalÃncia de outros 12 genÃtipos de alto risco de HPV (que nÃo 16 e 18), foi frequente, em citologias com e sem atipias escamosas, associados ou nÃo aos genÃtipos 16 e 18. A relaÃÃo de atipias escamosas com HPV 16 e HPV AR foi significativa. Os dados obtidos estÃo em concordÃncia com a literatura quanto à existÃncia de uma heterogeneidade na distribuiÃÃo dos diversos genÃtipos e sua associaÃÃo mais frequente conforme o nÃvel de atipia.http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=15775application/pdfinfo:eu-repo/semantics/openAccessporreponame:Biblioteca Digital de Teses e Dissertações da UFCinstname:Universidade Federal do Cearáinstacron:UFC2019-01-21T11:29:05Zmail@mail.com -
dc.title.en.fl_str_mv Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
dc.title.alternative.pt.fl_str_mv IdentificaÃÃo de HPV de alto risco oncogÃnico em citologia em meio lÃquido com atipias escamosas e carcinoma escamoso
title Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
spellingShingle Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
Sarah Carvalho de Alencar Sampaio
ANATOMIA PATOLOGICA E PATOLOGIA CLINICA
title_short Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
title_full Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
title_fullStr Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
title_full_unstemmed Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
title_sort Identification of high risk HPV genotypes at liquid-based cytology with diagnosis of squamous atypia and squamous carcinoma
author Sarah Carvalho de Alencar Sampaio
author_facet Sarah Carvalho de Alencar Sampaio
author_role author
dc.contributor.advisor1.fl_str_mv Josà EleutÃrio JÃnior
dc.contributor.advisor1ID.fl_str_mv 21126402320
dc.contributor.referee1.fl_str_mv Paulo Roberto Carvalho de Almeida
dc.contributor.referee1ID.fl_str_mv 11969130300
dc.contributor.referee1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.jsp?id=K4702849Y9
dc.contributor.referee2.fl_str_mv Ana Katherine da Silveira GonÃalves de Oliveira
dc.contributor.referee2ID.fl_str_mv 42252725400
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/3436756337251449
dc.contributor.referee3.fl_str_mv Raquel Autran Coelho
dc.contributor.referee3ID.fl_str_mv 76768104349
dc.contributor.referee3Lattes.fl_str_mv http://lattes.cnpq.br/2859195772390069
dc.contributor.authorID.fl_str_mv 8451823530
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/0813708453638097
dc.contributor.author.fl_str_mv Sarah Carvalho de Alencar Sampaio
contributor_str_mv Josà EleutÃrio JÃnior
Paulo Roberto Carvalho de Almeida
Ana Katherine da Silveira GonÃalves de Oliveira
Raquel Autran Coelho
dc.subject.cnpq.fl_str_mv ANATOMIA PATOLOGICA E PATOLOGIA CLINICA
topic ANATOMIA PATOLOGICA E PATOLOGIA CLINICA
dc.description.abstract.por.fl_txt_mv To identify high-risk HPV genotypes in liquid-based cytology smears(SurePathÂ) with diagnosis of squamous atypia and squamous carcinoma. METHODS: This was a cross-sectional study using 165 liquid-based cytology with squamous atypia and 149 without atypia. HPV genotyping by real-time PCR was performed on this material. The material was processed by COBASÂ 4800 System (Roche), which has three detection channels: HPV 16, HPV 18, and HPV HR (other twelve high-risk genotypes). RESULTS:We analyzed 75 cases of ASC-US, 62 LSIL, 8 ASC-H, 12 HSIL and 8 squamous carcinomas. The average age was 32.2 years in the group without atypia, 31.1 years for ASC-US and LSIL, 41.2 years for ASC-H and HSIL and 43.1 years for SCC. There were 112 positive cases for HPV (68%) in the group with atypia: 72% positive for HPV AR, 18% of HPV16 and 10% of HPV 18. Only in ASC-US group, HPV positive and negative frequency was similar (1:1). In the others, the amount of HPV positive cases surpassed negative ones. In the group of Cytology without atypia were found 40 positive cases for HPV (26%): 68% positive for HPV AR probe, 17% of HPV18 and 15% of HPV16. Detections by a single probe predominated in both groups (88% and 84%). In the group with atypia the most prevalent combination was HPV16 and HPV HR (57%); and in cases without atypia was HPV18 and HPV HR (68%) and there was a single positive case for three channels in this group. CONCLUSIONS: The prevalence of other 12 high-risk HPV genotypes (not 16 and 18), was frequent in cytology with and without squamous atypia, associated or not with genotypes 16 and 18. The connection of squamous atypia with HPV 16 and HPV HR was significant. The data obtained are in agreement with the literature regarding the existence of heterogeneity in the distribution of different genotypes and their most frequent association as the level of atypia.
Identificar genÃtipos de HPV de alto risco em citologias em meio lÃquido com diagnÃstico de atipias escamosas e carcinoma escamoso. MÃTODOS: Foi realizado estudo de corte transversal utilizando 165 citologias em meio lÃquido com atipias escamosas e 149 sem atipias. Nesse material foi realizado genotipagem do HPV por PCR em tempo real. O material foi processado pelo Sistema Cobas 4800 (Roche), que apresenta trÃs canais de detecÃÃo, para HPV 16, HPV 18, e HPV AR (outros doze genÃtipos de HPV de alto risco). RESULTADOS: Foram analisados 75 casos de ASC-US, 62 LSIL, 8 ASC-H, 12 HSIL e 8 carcinomas escamosos. A mÃdia etÃria foi de 32,2 anos no grupo sem atipias, 31,1 anos para ASC-US e LSIL, 41,2 anos para ASC-H e HSIL e 43,1 anos para CEC. Houve 112 casos positivos para HPV (68%) no grupo com atipias, sendo 72% de positividade para HPV AR, 18% de HPV 16 e 10% de HPV 18. Somente nos casos de ASC-US a frequÃncia de HPV positivo e negativo foi semelhante (1:1). Nas demais, a quantidade de casos HPV positivo ultrapassou a de negativos. No grupo de citologias sem atipias, foram encontrados 40 casos positivos para HPV (26%), sendo 68% de positividade para a sonda HPV AR, 17% de HPV 18 e 15% de HPV16. Predominaram detecÃÃes por uma Ãnica sonda em ambos os grupos (88% e 84%). No grupo com atipias, a combinaÃÃo mais presente foi HPV AR e 16 (57%); e nos casos sem atipias, foi HPV AR e 18 (68%) e houve um Ãnico caso positivo para os trÃs canais neste grupo. CONCLUSÃES: A prevalÃncia de outros 12 genÃtipos de alto risco de HPV (que nÃo 16 e 18), foi frequente, em citologias com e sem atipias escamosas, associados ou nÃo aos genÃtipos 16 e 18. A relaÃÃo de atipias escamosas com HPV 16 e HPV AR foi significativa. Os dados obtidos estÃo em concordÃncia com a literatura quanto à existÃncia de uma heterogeneidade na distribuiÃÃo dos diversos genÃtipos e sua associaÃÃo mais frequente conforme o nÃvel de atipia.
description To identify high-risk HPV genotypes in liquid-based cytology smears(SurePathÂ) with diagnosis of squamous atypia and squamous carcinoma. METHODS: This was a cross-sectional study using 165 liquid-based cytology with squamous atypia and 149 without atypia. HPV genotyping by real-time PCR was performed on this material. The material was processed by COBASÂ 4800 System (Roche), which has three detection channels: HPV 16, HPV 18, and HPV HR (other twelve high-risk genotypes). RESULTS:We analyzed 75 cases of ASC-US, 62 LSIL, 8 ASC-H, 12 HSIL and 8 squamous carcinomas. The average age was 32.2 years in the group without atypia, 31.1 years for ASC-US and LSIL, 41.2 years for ASC-H and HSIL and 43.1 years for SCC. There were 112 positive cases for HPV (68%) in the group with atypia: 72% positive for HPV AR, 18% of HPV16 and 10% of HPV 18. Only in ASC-US group, HPV positive and negative frequency was similar (1:1). In the others, the amount of HPV positive cases surpassed negative ones. In the group of Cytology without atypia were found 40 positive cases for HPV (26%): 68% positive for HPV AR probe, 17% of HPV18 and 15% of HPV16. Detections by a single probe predominated in both groups (88% and 84%). In the group with atypia the most prevalent combination was HPV16 and HPV HR (57%); and in cases without atypia was HPV18 and HPV HR (68%) and there was a single positive case for three channels in this group. CONCLUSIONS: The prevalence of other 12 high-risk HPV genotypes (not 16 and 18), was frequent in cytology with and without squamous atypia, associated or not with genotypes 16 and 18. The connection of squamous atypia with HPV 16 and HPV HR was significant. The data obtained are in agreement with the literature regarding the existence of heterogeneity in the distribution of different genotypes and their most frequent association as the level of atypia.
publishDate 2015
dc.date.issued.fl_str_mv 2015-03-04
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
status_str publishedVersion
format masterThesis
dc.identifier.uri.fl_str_mv http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=15775
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dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Universidade Federal do CearÃ
dc.publisher.program.fl_str_mv Programa de PÃs-GraduaÃÃo em Patologia
dc.publisher.initials.fl_str_mv UFC
dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade Federal do CearÃ
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da UFC
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reponame_str Biblioteca Digital de Teses e Dissertações da UFC
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instname_str Universidade Federal do Ceará
instacron_str UFC
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repository.mail.fl_str_mv mail@mail.com
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