Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome

Detalhes bibliográficos
Autor(a) principal: Allan Rodrigo Soares Maia
Data de Publicação: 2016
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFC
Texto Completo: http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=18436
Resumo: Myelodysplastic Syndrome (MDS) is a group of clonal diseases of hematopoietic progenitor cells, characterized by peripheral cytopenia (s), dysplasia of one or more myeloid cell lines and increased risk of developing acute myeloid leukemia. SMD is considered a disease of the elderly, as approximately 80% of patients over 60 years are diagnosed with the disease. The causes of MDS are known in only 15% of cases. Regarding environmental factors as triggers of MDS, the use of prior chemotherapy, especially of alkylating agents and purine analogs and radiotherapy may be included. The pathogenesis of SMD involves DNA damage in hematopoietic stem cells, also resulting from single stranded DNA damage (SSB) in the DNA having three mechanisms: base excision repair (BER), base pair mismatch repair (MMR), and repair By nucleotide excision (NER), as repair processes necessary to ensure the genomic stability of stem cells. This cohort study aimed to evaluate the mRNA expression level of the single-stranded DNA repair mechanism, ERCC8 (CSA), ERCC6 (CSB) acting on the transcription-linked nucleotide excision repair mechanism (TC (XPG) and XPA acting at the confluence of the GG-NER and TC-NER subunits, associating the molecular findings with clinical variables (NER), XPC acting on the nucleotide excision repair mechanism linked to the global genome (GG-NER), ERCC5 And socio- demographic characteristics of patients with Myelodysplastic Syndrome. This analysis was based on the qPCR methodology, between bone marrow samples from 74 patients with MDS and 10 bone marrow samples from healthy elderly volunteers. Patients with MDS were diagnosed according to the criteria proposed by the World Health Organization and stratified according to the prognostic criteria established by the revised International Prognostic Score Index. With this study, it was possible to identify that: 1. patients diagnosed with hypocellular MDS presented increased levels of XPA and XPC gene expression and reduced ERCC8 (CSA) gene expression level; 2. Increased levels of ERCC8 (CSA), ERCC5 (XPG) and XPA gene were identified in poorer prognostic variables for MDS; 3. increased expression of the ERCC6 (CSB), ERCC5 (XPG) and XPA genes in cytopenic profiles representative of a more aggressive disease picture was observed; 4. MDS patients with increased ERCC8 (CSA) gene expression levels exhibited longer survival, and when increased expression levels of the ERCC5 (XPG), XPA and XPC genes exhibited lower survival; 5. In the analysis of correlations, the expression of the XPA gene showed a correlation of 26.8% with the expression of the ERCC5 gene (XPG), as well as, the expression of the XPA gene showed a 70.5% correlation with the expression of the XPC gene and, finally, XPC gene expression was found to have a 36.7% correlation with ERCC5 (XPG) gene expression.
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spelling info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisExpression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndromeExpressÃo de genes relacionados Ãs vias de reparo de danos em fita simples (ERCC8, ERCC6, ERCC5, XPA e XPC) no DNA em pacientes com sÃndrome mielodisplÃsica2016-12-22Ronald Feitosa Pinheiro87656388400http://lattes.cnpq.br/4755251182720144ClÃudia do à Pessoa52089118415http://lattes.cnpq.br/1305553577433058Silvia Maria Meira MagalhÃes14430347387http://lattes.cnpq.br/9118657720317683FabÃola Fernandes Heredia85700614391http://lattes.cnpq.br/4953653032759739Howard Lopes Ribeiro JÃnior03214711300http://lattes.cnpq.br/327067628856548754963702304 http://lattes.cnpq.br/0645112848703085Allan Rodrigo Soares MaiaUniversidade Federal do CearÃPrograma de PÃs-GraduaÃÃo em CiÃncias MÃdicasUFCBRMEDICINAMyelodysplastic Syndrome (MDS) is a group of clonal diseases of hematopoietic progenitor cells, characterized by peripheral cytopenia (s), dysplasia of one or more myeloid cell lines and increased risk of developing acute myeloid leukemia. SMD is considered a disease of the elderly, as approximately 80% of patients over 60 years are diagnosed with the disease. The causes of MDS are known in only 15% of cases. Regarding environmental factors as triggers of MDS, the use of prior chemotherapy, especially of alkylating agents and purine analogs and radiotherapy may be included. The pathogenesis of SMD involves DNA damage in hematopoietic stem cells, also resulting from single stranded DNA damage (SSB) in the DNA having three mechanisms: base excision repair (BER), base pair mismatch repair (MMR), and repair By nucleotide excision (NER), as repair processes necessary to ensure the genomic stability of stem cells. This cohort study aimed to evaluate the mRNA expression level of the single-stranded DNA repair mechanism, ERCC8 (CSA), ERCC6 (CSB) acting on the transcription-linked nucleotide excision repair mechanism (TC (XPG) and XPA acting at the confluence of the GG-NER and TC-NER subunits, associating the molecular findings with clinical variables (NER), XPC acting on the nucleotide excision repair mechanism linked to the global genome (GG-NER), ERCC5 And socio- demographic characteristics of patients with Myelodysplastic Syndrome. This analysis was based on the qPCR methodology, between bone marrow samples from 74 patients with MDS and 10 bone marrow samples from healthy elderly volunteers. Patients with MDS were diagnosed according to the criteria proposed by the World Health Organization and stratified according to the prognostic criteria established by the revised International Prognostic Score Index. With this study, it was possible to identify that: 1. patients diagnosed with hypocellular MDS presented increased levels of XPA and XPC gene expression and reduced ERCC8 (CSA) gene expression level; 2. Increased levels of ERCC8 (CSA), ERCC5 (XPG) and XPA gene were identified in poorer prognostic variables for MDS; 3. increased expression of the ERCC6 (CSB), ERCC5 (XPG) and XPA genes in cytopenic profiles representative of a more aggressive disease picture was observed; 4. MDS patients with increased ERCC8 (CSA) gene expression levels exhibited longer survival, and when increased expression levels of the ERCC5 (XPG), XPA and XPC genes exhibited lower survival; 5. In the analysis of correlations, the expression of the XPA gene showed a correlation of 26.8% with the expression of the ERCC5 gene (XPG), as well as, the expression of the XPA gene showed a 70.5% correlation with the expression of the XPC gene and, finally, XPC gene expression was found to have a 36.7% correlation with ERCC5 (XPG) gene expression.A SÃndrome MielodisplÃsica (SMD) à um grupo de doenÃas clonais das cÃlulas progenitoras hematopoiÃticas, caracterizadas por citopenia(s) perifÃrica(s), displasia de uma ou mais linhagens celulares mielÃides e aumento do risco de desenvolvimento de leucemia mielÃide aguda. A SMD à considerada uma doenÃa de pessoas idosas, pois aproximadamente 80% dos pacientes acima de 60 anos sÃo diagnosticados com a doenÃa. As causas da SMD sÃo conhecidas em apenas 15% dos casos. Em relaÃÃo aos fatores ambientais como desencadeadores da SMD, podem ser incluÃdos o uso de quimioterapia prÃvia, especialmente de agentes alquilantes e anÃlogos da purina e radioterapia. A patogÃnese da SMD envolve danos no DNA nas cÃlulas tronco hematopoÃticas, oriundas tambÃm pelos danos de fita simples (SSB) no DNA tendo trÃs mecanismos: reparo por excisÃo de bases (BER), reparo de erros de emparelhamento de bases (MMR) e reparo por excisÃo de nucleotÃdeo (NER), como processos de reparo necessÃrios para garantir a estabilidade genÃmica das cÃlulas-tronco. Este estudo de coorte propÃs avaliar o nÃvel de expressÃo do mRNA dos genes atuantes no mecanismo de reparo em danos de fita simples no DNA, ERCC8 (CSA), ERCC6(CSB) atuantes no mecanismo de reparo de excisÃo de nucleotÃdeos ligado a transcriÃÃo (TC-NER), XPC atuante no mecanismo de reparo por excisÃo de nucleotpideos ligado ao genoma global (GG-NER), ERCC5(XPG) e XPA atuantes na confluÃncia das subvias GG-NER e TC-NER, associando os achados moleculares com variÃveis clÃnicas e sÃcio-demogrÃficas de pacientes portadores de SÃndrome MielodisplÃsica. Esta anÃlise baseou-se na metodologia de qPCR, entre amostras de medula Ãssea de 74 pacientes com SMD e 10 amostras de medula Ãssea de idosos voluntÃrios sadios. Os pacientes com SMD foram diagnosticados de acordo com os critÃrios propostos pela OrganizaÃÃo Mundial de SaÃde e estratificados de acordo com os critÃrios prognÃsticos estabelecidos pelo Ãndice de Escore PrognÃstico Internacional revisado. Com este estudo foi possÃvel identificar que: 1. pacientes diagnosticados com SMD hipocelular apresentaram aumento nos nÃveis de expressÃo dos genes XPA e XPC e reduzido nÃvel de expressÃo do gene ERCC8(CSA); 2. identificou-se que nÃveis de expressÃo aumentados do gene ERCC8(CSA), ERCC5(XPG) e XPA em variÃveis de pior prognÃstico para SMD; 3. foi observado um aumento de expressÃo dos genes ERCC6(CSB), ERCC5(XPG) e XPA em perfis de citopenias representativas de um quadro de doenÃa mais agressiva; 4. pacientes com SMD apresentando nÃveis de expressÃo aumentados do gene ERCC8(CSA) exibiram maior sobrevida e quando apresentando nÃveis de expressÃo aumentados dos genes ERCC5(XPG), XPA e XPC exibiram menor sobrevida; 5. nas anÃlises de correlaÃÃes verificou-se que a expressÃo do gene XPA apresentou correlaÃÃo de 26,8% com a expressÃo do gene ERCC5(XPG), bem como, a expressÃo do gene XPA exibiu correlaÃÃo 70,5% com a expressÃo do gene XPC e, por fim, foi verificado que a expressÃo do gene XPC exibiu correlaÃÃo de 36,7% com a expressÃo do gene ERCC5(XPG).FundaÃÃo Cearense de Apoio ao Desenvolvimento Cientifico e TecnolÃgicohttp://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=18436application/pdfinfo:eu-repo/semantics/openAccessporreponame:Biblioteca Digital de Teses e Dissertações da UFCinstname:Universidade Federal do Cearáinstacron:UFC2019-01-21T11:31:22Zmail@mail.com -
dc.title.en.fl_str_mv Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
dc.title.alternative.pt.fl_str_mv ExpressÃo de genes relacionados Ãs vias de reparo de danos em fita simples (ERCC8, ERCC6, ERCC5, XPA e XPC) no DNA em pacientes com sÃndrome mielodisplÃsica
title Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
spellingShingle Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
Allan Rodrigo Soares Maia
MEDICINA
title_short Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
title_full Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
title_fullStr Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
title_full_unstemmed Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
title_sort Expression of genes related to damage repairs on simple ribbon (ERCC8, ERCC6, ERCC5, XPA and XPC) in DNA em patients with myelodisplasica syndrome
author Allan Rodrigo Soares Maia
author_facet Allan Rodrigo Soares Maia
author_role author
dc.contributor.advisor1.fl_str_mv Ronald Feitosa Pinheiro
dc.contributor.advisor1ID.fl_str_mv 87656388400
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/4755251182720144
dc.contributor.referee1.fl_str_mv ClÃudia do à Pessoa
dc.contributor.referee1ID.fl_str_mv 52089118415
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/1305553577433058
dc.contributor.referee2.fl_str_mv Silvia Maria Meira MagalhÃes
dc.contributor.referee2ID.fl_str_mv 14430347387
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/9118657720317683
dc.contributor.referee3.fl_str_mv FabÃola Fernandes Heredia
dc.contributor.referee3ID.fl_str_mv 85700614391
dc.contributor.referee3Lattes.fl_str_mv http://lattes.cnpq.br/4953653032759739
dc.contributor.referee4.fl_str_mv Howard Lopes Ribeiro JÃnior
dc.contributor.referee4ID.fl_str_mv 03214711300
dc.contributor.referee4Lattes.fl_str_mv http://lattes.cnpq.br/3270676288565487
dc.contributor.authorID.fl_str_mv 54963702304
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/0645112848703085
dc.contributor.author.fl_str_mv Allan Rodrigo Soares Maia
contributor_str_mv Ronald Feitosa Pinheiro
ClÃudia do à Pessoa
Silvia Maria Meira MagalhÃes
FabÃola Fernandes Heredia
Howard Lopes Ribeiro JÃnior
dc.subject.cnpq.fl_str_mv MEDICINA
topic MEDICINA
dc.description.sponsorship.fl_txt_mv FundaÃÃo Cearense de Apoio ao Desenvolvimento Cientifico e TecnolÃgico
dc.description.abstract.por.fl_txt_mv Myelodysplastic Syndrome (MDS) is a group of clonal diseases of hematopoietic progenitor cells, characterized by peripheral cytopenia (s), dysplasia of one or more myeloid cell lines and increased risk of developing acute myeloid leukemia. SMD is considered a disease of the elderly, as approximately 80% of patients over 60 years are diagnosed with the disease. The causes of MDS are known in only 15% of cases. Regarding environmental factors as triggers of MDS, the use of prior chemotherapy, especially of alkylating agents and purine analogs and radiotherapy may be included. The pathogenesis of SMD involves DNA damage in hematopoietic stem cells, also resulting from single stranded DNA damage (SSB) in the DNA having three mechanisms: base excision repair (BER), base pair mismatch repair (MMR), and repair By nucleotide excision (NER), as repair processes necessary to ensure the genomic stability of stem cells. This cohort study aimed to evaluate the mRNA expression level of the single-stranded DNA repair mechanism, ERCC8 (CSA), ERCC6 (CSB) acting on the transcription-linked nucleotide excision repair mechanism (TC (XPG) and XPA acting at the confluence of the GG-NER and TC-NER subunits, associating the molecular findings with clinical variables (NER), XPC acting on the nucleotide excision repair mechanism linked to the global genome (GG-NER), ERCC5 And socio- demographic characteristics of patients with Myelodysplastic Syndrome. This analysis was based on the qPCR methodology, between bone marrow samples from 74 patients with MDS and 10 bone marrow samples from healthy elderly volunteers. Patients with MDS were diagnosed according to the criteria proposed by the World Health Organization and stratified according to the prognostic criteria established by the revised International Prognostic Score Index. With this study, it was possible to identify that: 1. patients diagnosed with hypocellular MDS presented increased levels of XPA and XPC gene expression and reduced ERCC8 (CSA) gene expression level; 2. Increased levels of ERCC8 (CSA), ERCC5 (XPG) and XPA gene were identified in poorer prognostic variables for MDS; 3. increased expression of the ERCC6 (CSB), ERCC5 (XPG) and XPA genes in cytopenic profiles representative of a more aggressive disease picture was observed; 4. MDS patients with increased ERCC8 (CSA) gene expression levels exhibited longer survival, and when increased expression levels of the ERCC5 (XPG), XPA and XPC genes exhibited lower survival; 5. In the analysis of correlations, the expression of the XPA gene showed a correlation of 26.8% with the expression of the ERCC5 gene (XPG), as well as, the expression of the XPA gene showed a 70.5% correlation with the expression of the XPC gene and, finally, XPC gene expression was found to have a 36.7% correlation with ERCC5 (XPG) gene expression.
A SÃndrome MielodisplÃsica (SMD) Ã um grupo de doenÃas clonais das cÃlulas progenitoras hematopoiÃticas, caracterizadas por citopenia(s) perifÃrica(s), displasia de uma ou mais linhagens celulares mielÃides e aumento do risco de desenvolvimento de leucemia mielÃide aguda. A SMD Ã considerada uma doenÃa de pessoas idosas, pois aproximadamente 80% dos pacientes acima de 60 anos sÃo diagnosticados com a doenÃa. As causas da SMD sÃo conhecidas em apenas 15% dos casos. Em relaÃÃo aos fatores ambientais como desencadeadores da SMD, podem ser incluÃdos o uso de quimioterapia prÃvia, especialmente de agentes alquilantes e anÃlogos da purina e radioterapia. A patogÃnese da SMD envolve danos no DNA nas cÃlulas tronco hematopoÃticas, oriundas tambÃm pelos danos de fita simples (SSB) no DNA tendo trÃs mecanismos: reparo por excisÃo de bases (BER), reparo de erros de emparelhamento de bases (MMR) e reparo por excisÃo de nucleotÃdeo (NER), como processos de reparo necessÃrios para garantir a estabilidade genÃmica das cÃlulas-tronco. Este estudo de coorte propÃs avaliar o nÃvel de expressÃo do mRNA dos genes atuantes no mecanismo de reparo em danos de fita simples no DNA, ERCC8 (CSA), ERCC6(CSB) atuantes no mecanismo de reparo de excisÃo de nucleotÃdeos ligado a transcriÃÃo (TC-NER), XPC atuante no mecanismo de reparo por excisÃo de nucleotpideos ligado ao genoma global (GG-NER), ERCC5(XPG) e XPA atuantes na confluÃncia das subvias GG-NER e TC-NER, associando os achados moleculares com variÃveis clÃnicas e sÃcio-demogrÃficas de pacientes portadores de SÃndrome MielodisplÃsica. Esta anÃlise baseou-se na metodologia de qPCR, entre amostras de medula Ãssea de 74 pacientes com SMD e 10 amostras de medula Ãssea de idosos voluntÃrios sadios. Os pacientes com SMD foram diagnosticados de acordo com os critÃrios propostos pela OrganizaÃÃo Mundial de SaÃde e estratificados de acordo com os critÃrios prognÃsticos estabelecidos pelo Ãndice de Escore PrognÃstico Internacional revisado. Com este estudo foi possÃvel identificar que: 1. pacientes diagnosticados com SMD hipocelular apresentaram aumento nos nÃveis de expressÃo dos genes XPA e XPC e reduzido nÃvel de expressÃo do gene ERCC8(CSA); 2. identificou-se que nÃveis de expressÃo aumentados do gene ERCC8(CSA), ERCC5(XPG) e XPA em variÃveis de pior prognÃstico para SMD; 3. foi observado um aumento de expressÃo dos genes ERCC6(CSB), ERCC5(XPG) e XPA em perfis de citopenias representativas de um quadro de doenÃa mais agressiva; 4. pacientes com SMD apresentando nÃveis de expressÃo aumentados do gene ERCC8(CSA) exibiram maior sobrevida e quando apresentando nÃveis de expressÃo aumentados dos genes ERCC5(XPG), XPA e XPC exibiram menor sobrevida; 5. nas anÃlises de correlaÃÃes verificou-se que a expressÃo do gene XPA apresentou correlaÃÃo de 26,8% com a expressÃo do gene ERCC5(XPG), bem como, a expressÃo do gene XPA exibiu correlaÃÃo 70,5% com a expressÃo do gene XPC e, por fim, foi verificado que a expressÃo do gene XPC exibiu correlaÃÃo de 36,7% com a expressÃo do gene ERCC5(XPG).
description Myelodysplastic Syndrome (MDS) is a group of clonal diseases of hematopoietic progenitor cells, characterized by peripheral cytopenia (s), dysplasia of one or more myeloid cell lines and increased risk of developing acute myeloid leukemia. SMD is considered a disease of the elderly, as approximately 80% of patients over 60 years are diagnosed with the disease. The causes of MDS are known in only 15% of cases. Regarding environmental factors as triggers of MDS, the use of prior chemotherapy, especially of alkylating agents and purine analogs and radiotherapy may be included. The pathogenesis of SMD involves DNA damage in hematopoietic stem cells, also resulting from single stranded DNA damage (SSB) in the DNA having three mechanisms: base excision repair (BER), base pair mismatch repair (MMR), and repair By nucleotide excision (NER), as repair processes necessary to ensure the genomic stability of stem cells. This cohort study aimed to evaluate the mRNA expression level of the single-stranded DNA repair mechanism, ERCC8 (CSA), ERCC6 (CSB) acting on the transcription-linked nucleotide excision repair mechanism (TC (XPG) and XPA acting at the confluence of the GG-NER and TC-NER subunits, associating the molecular findings with clinical variables (NER), XPC acting on the nucleotide excision repair mechanism linked to the global genome (GG-NER), ERCC5 And socio- demographic characteristics of patients with Myelodysplastic Syndrome. This analysis was based on the qPCR methodology, between bone marrow samples from 74 patients with MDS and 10 bone marrow samples from healthy elderly volunteers. Patients with MDS were diagnosed according to the criteria proposed by the World Health Organization and stratified according to the prognostic criteria established by the revised International Prognostic Score Index. With this study, it was possible to identify that: 1. patients diagnosed with hypocellular MDS presented increased levels of XPA and XPC gene expression and reduced ERCC8 (CSA) gene expression level; 2. Increased levels of ERCC8 (CSA), ERCC5 (XPG) and XPA gene were identified in poorer prognostic variables for MDS; 3. increased expression of the ERCC6 (CSB), ERCC5 (XPG) and XPA genes in cytopenic profiles representative of a more aggressive disease picture was observed; 4. MDS patients with increased ERCC8 (CSA) gene expression levels exhibited longer survival, and when increased expression levels of the ERCC5 (XPG), XPA and XPC genes exhibited lower survival; 5. In the analysis of correlations, the expression of the XPA gene showed a correlation of 26.8% with the expression of the ERCC5 gene (XPG), as well as, the expression of the XPA gene showed a 70.5% correlation with the expression of the XPC gene and, finally, XPC gene expression was found to have a 36.7% correlation with ERCC5 (XPG) gene expression.
publishDate 2016
dc.date.issued.fl_str_mv 2016-12-22
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
format doctoralThesis
dc.identifier.uri.fl_str_mv http://www.teses.ufc.br/tde_busca/arquivo.php?codArquivo=18436
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dc.publisher.none.fl_str_mv Universidade Federal do CearÃ
dc.publisher.program.fl_str_mv Programa de PÃs-GraduaÃÃo em CiÃncias MÃdicas
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dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade Federal do CearÃ
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