Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae

Detalhes bibliográficos
Autor(a) principal: Medeiros, Ravier Valcácer de
Data de Publicação: 2015
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
dARK ID: ark:/74562/00130000055ks
Texto Completo: https://repositorio.ufersa.edu.br/handle/tede/96
Resumo: The aim of this study was to characterize morphologically and molecularly 24 watermelon accessions belonging to the Cucurbitaceae Germplasm Collection of Plant Genetic Resources Laboratory at the Federal Rural University of the Semi-Arid (UFERSA) and promote the selection of sources of resistance among these accesses gummy. For the morphological characterization were used watermelon 24 hits and two commercial cultivars as witnesses, Crimson Sweet and Olympia. The design was a randomized complete block design with three replications and five plants per plot. The characterization was performed using morphological and agronomic descriptors only in fruit characters. We conducted analysis of variance and clustering of means by Scott-Knott at 5% probability test With these data were obtained generalized Mahalanobis distances (D2ij) and access grouped by the method based on the average linkage (UPGMA) with tailoring dendogram and evaluation of the relative contribution of descriptors for genetic divergence. Molecular characterization was performed using RAPD markers. The products of the amplifications were counted as absence of allele (0) and presence of the allele (1). The estimate of genetic similarity between each pair of genotypes was calculated by Sorence-Dice coefficient. One hundred primers SSR that were developed for melons were evaluated for their transferability watermelon. To observe the reaction of access to D. bryoniae the design was completely randomized with three repetitions and the same genotypes used in the characterization. Each plot consisted of five plants. Inoculation was accomplished in seedlings 25 days after planting, with the inclusion of colonized with toothpicks isolated on the lap of the seedlings, and to witness sticks sterilized without presence of inoculum. The evaluations were initiated seven days after inoculation and thereafter, performed every seven days for three weeks. Disease severity was assessed by using a grade scale ranging from 0 to 4, taking to review the notes for the last valuation date. The average data of notes per plot were subjected to analysis of variance (ANOVA) and averages grouped by Scott and Knott test at 5% probability. Observed significant results for the bulk of the fruit descriptors (MF), length (L) and width of fruit (L), fruit shape (FF), shell thickness in the stalk region (EC1), soluble solids (SS), color pulp (CP), pattern of stripes (PL) and external fruit color (CF). The grouping of hits from the morphological descriptors produced as only three access groups. Since the descriptors that most contributed to genetic divergence were L, FF, MF, PL, SS, C, CF and CP with 19:12%, 13:56%, 11:53%, 19.10%, 9.80% 8:37%, 7.83% and 5.22% respectively. The clustering performed with molecular markers produced five groups. In the analyzes of transferability 77% of SSR primers showed promise for use in work with watermelon. For reaction to D. bryoniae there was a significant effect of these hits, highlighting A-1, A-6, A-10, A-11, A-14 with resistance. Promising for future steps in breeding programs. Thus, it can be said that there are morphological and molecular differences in accessions, as well as possible sources of resistance to D. bryoniae
id UFER_f2f47a1e517781976c3291fb9839a5d3
oai_identifier_str oai:repositorio.ufersa.edu.br:tede/96
network_acronym_str UFER
network_name_str Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
repository_id_str
spelling Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniaeMorphological, molecular and reaction watermelon access to Didymella bryoniaeWatermelonCitrullus lanatusDidymella bryoniaeMelãnciaCitrullus lanatusDidymella bryoniaeCIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIAThe aim of this study was to characterize morphologically and molecularly 24 watermelon accessions belonging to the Cucurbitaceae Germplasm Collection of Plant Genetic Resources Laboratory at the Federal Rural University of the Semi-Arid (UFERSA) and promote the selection of sources of resistance among these accesses gummy. For the morphological characterization were used watermelon 24 hits and two commercial cultivars as witnesses, Crimson Sweet and Olympia. The design was a randomized complete block design with three replications and five plants per plot. The characterization was performed using morphological and agronomic descriptors only in fruit characters. We conducted analysis of variance and clustering of means by Scott-Knott at 5% probability test With these data were obtained generalized Mahalanobis distances (D2ij) and access grouped by the method based on the average linkage (UPGMA) with tailoring dendogram and evaluation of the relative contribution of descriptors for genetic divergence. Molecular characterization was performed using RAPD markers. The products of the amplifications were counted as absence of allele (0) and presence of the allele (1). The estimate of genetic similarity between each pair of genotypes was calculated by Sorence-Dice coefficient. One hundred primers SSR that were developed for melons were evaluated for their transferability watermelon. To observe the reaction of access to D. bryoniae the design was completely randomized with three repetitions and the same genotypes used in the characterization. Each plot consisted of five plants. Inoculation was accomplished in seedlings 25 days after planting, with the inclusion of colonized with toothpicks isolated on the lap of the seedlings, and to witness sticks sterilized without presence of inoculum. The evaluations were initiated seven days after inoculation and thereafter, performed every seven days for three weeks. Disease severity was assessed by using a grade scale ranging from 0 to 4, taking to review the notes for the last valuation date. The average data of notes per plot were subjected to analysis of variance (ANOVA) and averages grouped by Scott and Knott test at 5% probability. Observed significant results for the bulk of the fruit descriptors (MF), length (L) and width of fruit (L), fruit shape (FF), shell thickness in the stalk region (EC1), soluble solids (SS), color pulp (CP), pattern of stripes (PL) and external fruit color (CF). The grouping of hits from the morphological descriptors produced as only three access groups. Since the descriptors that most contributed to genetic divergence were L, FF, MF, PL, SS, C, CF and CP with 19:12%, 13:56%, 11:53%, 19.10%, 9.80% 8:37%, 7.83% and 5.22% respectively. The clustering performed with molecular markers produced five groups. In the analyzes of transferability 77% of SSR primers showed promise for use in work with watermelon. For reaction to D. bryoniae there was a significant effect of these hits, highlighting A-1, A-6, A-10, A-11, A-14 with resistance. Promising for future steps in breeding programs. Thus, it can be said that there are morphological and molecular differences in accessions, as well as possible sources of resistance to D. bryoniaeO objetivo geral deste trabalho foi caracterizar morfológica e molecularmente 24 acessos de melancia pertencentes à Coleção de Germoplasma de Cucurbitáceas do Laboratório de Recursos Genéticos Vegetais da Universidade Federal Rural do Semi-Árido (UFERSA) e promover a seleção de fontes de resistência dentre estes acessos ao crestamento gomoso. Para a caracterização morfológica foram utilizados 24 acessos de melancia e duas cultivares comercias como testemunhas, Crimson Sweet e Olímpia. O delineamento utilizado foi o de blocos casualizados com três repetições e cinco plantas por parcela. A caracterização foi realizada utilizando descritores morfo-agronômicos apenas em caracteres do fruto. Realizou-se análise de variância e agrupamento das médias pelo teste de Scott-knott a 5% de probabilidade Com estes dados foram obtidas as distâncias generalizadas de Mahalanobis (D2ij) e os acessos agrupados pelo método baseado na ligação média (UPGMA) com confecção do dendograma e avaliação da contribuição relativa dos descritores para a divergência genética. A caracterização molecular foi realizada com marcadores RAPD. Os produtos das amplificações foram computados como ausência do alelo (0) e presença do alelo (1). A estimativa de similaridade genética entre cada par de genótipos foi calculada pelo coeficiente de Sorence-Dice. Cem primers SSR que foram desenvolvidos para melão tiveram sua transferibilidade avaliada para melancia. Para se observar a reação dos acessos a D. bryoniae o delineamento utilizado foi o inteiramente casualizado com três repetições e os mesmos genótipos utilizados na caracterização. Cada parcela foi constituída de cinco plantas. A inoculação foi realizada em plântulas com 25 dias após o plantio, com a inserção de palitos colonizados com o isolado no colo das plântulas, e para testemunha palitos esterilizado sem presença de inoculo. As avaliações foram iniciadas sete dias após a inoculação e a partir de então, efetuadas a cada sete dias durante três semanas. A severidade da doença foi avaliada pela utilização de uma escala de notas variando de 0 a 4, tomando para analise as notas referentes ao último dia de avaliação. Os dados médios das notas por parcela foram submetidos à análise de variância (ANAVA) e as médias agrupadas pelo teste de Scott e Knott a 5% de probabilidade. Observou resultados significativos para os descritores massa do fruto (MF), comprimento (C) e largura do fruto (L), formato do fruto (FF), espessura da casca na região peduncular (EC1), sólidos solúveis (SS), cor da polpa (CP), padrão de listras (PL) e cor externa do fruto (CF). O agrupamento dos acessos a partir dos descritores morfológicos produziu tão somente três grupos de acessos. Sendo que os descritores que mais contribuíram para divergência genética foram L, FF, MF, PL, SS, C, CF e CP com 19.12%, 13.56%, 11.53%, 10.19%, 9.80%, 8.37%, 7.83% e 5.22%, respectivamente. O agrupamento realizado com os marcadores moleculares produziu cinco grupos. Nas análises de transferibilidade 77% dos primers SSR se mostraram promissores para serem utilizados em trabalhos com melancia. Para reação a Didymella bryoniae verificou-se efeito significativo esses acessos, destacando-se A-1, A-6, A-10, A-11, A-14 com resistência. Promissores para etapas futuras em programas de melhoramento. Sendo assim, pode-se afirmar que existem diferenças morfológicas e moleculares nos acessos avaliados, como também possíveis fontes de resistência a D. bryoniaeCoordenação de Aperfeiçoamento de Pessoal de Nível SuperiorUniversidade Federal Rural do Semi-ÁridoBRCentro de Ciências Agrárias - CCAUFERSAPrograma de Pós-Graduação em FitotecniaNunes, Glauber Henrique de SousaCPF:82888884453http://lattes.cnpq.br/6199153570472953Antonio, Rafaela PriscilaCPF:01172281416http://lattes.cnpq.br/4570230133800020Silveira, Lindomar Maria daCPF:88207340444http://lattes.cnpq.br/2988333573887017Ribeiro Júnior, Pedro MartinsCPF:88839818634http://lattes.cnpq.br/0563443107378070Medeiros, Ravier Valcácer de2016-08-12T19:15:32Z2016-02-172015-02-12info:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/pdfMEDEIROS, Ravier Valcácer de. Morphological, molecular and reaction watermelon access to Didymella bryoniae. 2015. 70 f. Dissertação (Mestrado em Agricultura Tropical) - Universidade Federal Rural do Semi-Árido, Mossoró, 2015.https://repositorio.ufersa.edu.br/handle/tede/96ark:/74562/00130000055ksporinfo:eu-repo/semantics/openAccessCC-BY-SAreponame:Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)instname:Universidade Federal Rural do Semi-Árido (UFERSA)instacron:UFERSA2023-12-19T01:01:37Zoai:repositorio.ufersa.edu.br:tede/96Repositório Institucionalhttps://repositorio.ufersa.edu.br/PUBhttps://repositorio.ufersa.edu.br/server/oai/requestrepositorio@ufersa.edu.br || admrepositorio@ufersa.edu.bropendoar:2023-12-19T01:01:37Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU) - Universidade Federal Rural do Semi-Árido (UFERSA)false
dc.title.none.fl_str_mv Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
Morphological, molecular and reaction watermelon access to Didymella bryoniae
title Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
spellingShingle Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
Medeiros, Ravier Valcácer de
Watermelon
Citrullus lanatus
Didymella bryoniae
Melãncia
Citrullus lanatus
Didymella bryoniae
CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA
title_short Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
title_full Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
title_fullStr Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
title_full_unstemmed Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
title_sort Caracterização morfológica, molecular e reação de acessos de melancia a Didymella bryoniae
author Medeiros, Ravier Valcácer de
author_facet Medeiros, Ravier Valcácer de
author_role author
dc.contributor.none.fl_str_mv Nunes, Glauber Henrique de Sousa
CPF:82888884453
http://lattes.cnpq.br/6199153570472953
Antonio, Rafaela Priscila
CPF:01172281416
http://lattes.cnpq.br/4570230133800020
Silveira, Lindomar Maria da
CPF:88207340444
http://lattes.cnpq.br/2988333573887017
Ribeiro Júnior, Pedro Martins
CPF:88839818634
http://lattes.cnpq.br/0563443107378070
dc.contributor.author.fl_str_mv Medeiros, Ravier Valcácer de
dc.subject.por.fl_str_mv Watermelon
Citrullus lanatus
Didymella bryoniae
Melãncia
Citrullus lanatus
Didymella bryoniae
CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA
topic Watermelon
Citrullus lanatus
Didymella bryoniae
Melãncia
Citrullus lanatus
Didymella bryoniae
CIENCIAS AGRARIAS::AGRONOMIA::FITOTECNIA
description The aim of this study was to characterize morphologically and molecularly 24 watermelon accessions belonging to the Cucurbitaceae Germplasm Collection of Plant Genetic Resources Laboratory at the Federal Rural University of the Semi-Arid (UFERSA) and promote the selection of sources of resistance among these accesses gummy. For the morphological characterization were used watermelon 24 hits and two commercial cultivars as witnesses, Crimson Sweet and Olympia. The design was a randomized complete block design with three replications and five plants per plot. The characterization was performed using morphological and agronomic descriptors only in fruit characters. We conducted analysis of variance and clustering of means by Scott-Knott at 5% probability test With these data were obtained generalized Mahalanobis distances (D2ij) and access grouped by the method based on the average linkage (UPGMA) with tailoring dendogram and evaluation of the relative contribution of descriptors for genetic divergence. Molecular characterization was performed using RAPD markers. The products of the amplifications were counted as absence of allele (0) and presence of the allele (1). The estimate of genetic similarity between each pair of genotypes was calculated by Sorence-Dice coefficient. One hundred primers SSR that were developed for melons were evaluated for their transferability watermelon. To observe the reaction of access to D. bryoniae the design was completely randomized with three repetitions and the same genotypes used in the characterization. Each plot consisted of five plants. Inoculation was accomplished in seedlings 25 days after planting, with the inclusion of colonized with toothpicks isolated on the lap of the seedlings, and to witness sticks sterilized without presence of inoculum. The evaluations were initiated seven days after inoculation and thereafter, performed every seven days for three weeks. Disease severity was assessed by using a grade scale ranging from 0 to 4, taking to review the notes for the last valuation date. The average data of notes per plot were subjected to analysis of variance (ANOVA) and averages grouped by Scott and Knott test at 5% probability. Observed significant results for the bulk of the fruit descriptors (MF), length (L) and width of fruit (L), fruit shape (FF), shell thickness in the stalk region (EC1), soluble solids (SS), color pulp (CP), pattern of stripes (PL) and external fruit color (CF). The grouping of hits from the morphological descriptors produced as only three access groups. Since the descriptors that most contributed to genetic divergence were L, FF, MF, PL, SS, C, CF and CP with 19:12%, 13:56%, 11:53%, 19.10%, 9.80% 8:37%, 7.83% and 5.22% respectively. The clustering performed with molecular markers produced five groups. In the analyzes of transferability 77% of SSR primers showed promise for use in work with watermelon. For reaction to D. bryoniae there was a significant effect of these hits, highlighting A-1, A-6, A-10, A-11, A-14 with resistance. Promising for future steps in breeding programs. Thus, it can be said that there are morphological and molecular differences in accessions, as well as possible sources of resistance to D. bryoniae
publishDate 2015
dc.date.none.fl_str_mv 2015-02-12
2016-08-12T19:15:32Z
2016-02-17
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv MEDEIROS, Ravier Valcácer de. Morphological, molecular and reaction watermelon access to Didymella bryoniae. 2015. 70 f. Dissertação (Mestrado em Agricultura Tropical) - Universidade Federal Rural do Semi-Árido, Mossoró, 2015.
https://repositorio.ufersa.edu.br/handle/tede/96
dc.identifier.dark.fl_str_mv ark:/74562/00130000055ks
identifier_str_mv MEDEIROS, Ravier Valcácer de. Morphological, molecular and reaction watermelon access to Didymella bryoniae. 2015. 70 f. Dissertação (Mestrado em Agricultura Tropical) - Universidade Federal Rural do Semi-Árido, Mossoró, 2015.
ark:/74562/00130000055ks
url https://repositorio.ufersa.edu.br/handle/tede/96
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
CC-BY-SA
eu_rights_str_mv openAccess
rights_invalid_str_mv CC-BY-SA
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
BR
Centro de Ciências Agrárias - CCA
UFERSA
Programa de Pós-Graduação em Fitotecnia
publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
BR
Centro de Ciências Agrárias - CCA
UFERSA
Programa de Pós-Graduação em Fitotecnia
dc.source.none.fl_str_mv reponame:Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
instname:Universidade Federal Rural do Semi-Árido (UFERSA)
instacron:UFERSA
instname_str Universidade Federal Rural do Semi-Árido (UFERSA)
instacron_str UFERSA
institution UFERSA
reponame_str Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
collection Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU)
repository.name.fl_str_mv Repositório Digital da Universidade Federal Rural do Semi-Árido (RDU) - Universidade Federal Rural do Semi-Árido (UFERSA)
repository.mail.fl_str_mv repositorio@ufersa.edu.br || admrepositorio@ufersa.edu.br
_version_ 1817700479946194944