Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil
Autor(a) principal: | |
---|---|
Data de Publicação: | 2009 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) |
Texto Completo: | http://repositorio.ufes.br/handle/10/3815 |
Resumo: | The genus RhipidomysTshudi, 1845 belonging to the tribe Thomasomyini(Ray Steadman & 1982) includes rodents with arboreal habits, nocturnal and solitary. Are small, the weight varies from 35 to 170 grams, characterized by a combination of long vibrissae, brush or tuft at thedistal tail and dark coats this on the back of their front legs (Tribe, 1996; Emmons & Feer, 1997 ). It is widely distributed ranging from east of Panama, crossing South America to northern Argentina. In Brazil are recorded in all biomes. Cytogenetic studies in this genus revealed a high karyotypic variability, with three diploid numbers 2n = 44, 48 and 50, and varying the number of autosomal arms (NFA) and the sex chromosomes, totaling 20 distinct cytotypes. The karyotypes with 2n = 44 retain most of the variation of the genus karyotype with 11 distinct complements autosomal (NFA = 46, 48, 49, 50, 52, 54, 61, 70, 74, 76 and 80). The karyotype with 2n = 48 has three distinct cytotypes (NFA = 66, 67 and 68), whereas 2n = 50 presents two different cytotypes (NFA = 70 and 71). It was suggested that these could be divided karyotypes and three groups according to the 2n and NFA group R. nitelacomposed of animals with 2n = 48/50, group R. leucodactyluswith 2n = 44 and NFA low ranging from 46 to 52, and group R. mastacalis2n = 44 and NFA high ranging from 74 to 80. This distinction was reinforced by the existence of private alleles in some of these groups. Although data from the literature suggest that the karyotype is a good tool to assist in the characterization of species Rhipidomys, and molecular studies begin to suggest how the karyotypes of Rhipidomysare phylogenetically structured, work involving karyotypic data on molecular characterization of populations are nonexistent in Rhipidomys. Accordingly, we propose to characterize the karyotypes of Rhipidomysthe number and morphology of chromosomes; propose a molecular phylogenetic hypothesis for the forms from eastern Brazil using a new molecular marker; verify that the karyotypes distinct monophyletic clades are correlated with, and test the validity Rhipidomysgroupings based on karyotype structure: group R. leucodactylus(NFAS low) and group R. mastacalis (NFAshigh). In this study we found two new descriptions of karyotypes, a karyotype with unprecedented high NFA (NFA 2n = 44 and = 72) and another with an unprecedented combination of X and Y chromosomes (2n = 44, = 50 NFA, XbYc). Adding our data to the literature we found 22 karyotypes described for the genus Rhipidomys. Karyotypes of these 22, 14 were associated with 12 of the 21 taxa recognized in Rhipidomys, and eight karyotypes are not associated with any recognized taxon. Furthermore, we identified six species of Rhipidomysrecognized and suggest the presence of two new taxa to eastern Brazil. We find evidence that vicarious barrier in the Atlantic is marked by the Jequitinhonha river, not the Doce river, as suggested in many studies. Revealed that the group with high NFA is monophyletic, while the group with low NFA is polyphyletic and paraphyletic, a fact which goes against the hypothesis of karyotypic groups. We found that there is an upward trend in the number of autosomal arms in the genre, being more karyotypic forms derived farther from the bridge probable origin of the genus in 9South America yet, it was proposed that the source of radiation occurred RhipidomysAndes and the populations of this region carry the primitive conditions of the group, as the 2n = 44 and low NFA. From this ancestral karyotype propose a model of karyotype evolution taking into account the distribution of chromosomal forms in each region |
id |
UFES_3c5e20dbe66382c3ba76b0f99a1dc7c3 |
---|---|
oai_identifier_str |
oai:repositorio.ufes.br:10/3815 |
network_acronym_str |
UFES |
network_name_str |
Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) |
repository_id_str |
2108 |
spelling |
Fagundes, ValériaThomazini, Núbia BadkeAzevedo, Celso OliveiraCosta, Leonora PiresGeise, Lena2016-08-29T15:09:09Z2016-07-112016-08-29T15:09:09Z2009-03-23The genus RhipidomysTshudi, 1845 belonging to the tribe Thomasomyini(Ray Steadman & 1982) includes rodents with arboreal habits, nocturnal and solitary. Are small, the weight varies from 35 to 170 grams, characterized by a combination of long vibrissae, brush or tuft at thedistal tail and dark coats this on the back of their front legs (Tribe, 1996; Emmons & Feer, 1997 ). It is widely distributed ranging from east of Panama, crossing South America to northern Argentina. In Brazil are recorded in all biomes. Cytogenetic studies in this genus revealed a high karyotypic variability, with three diploid numbers 2n = 44, 48 and 50, and varying the number of autosomal arms (NFA) and the sex chromosomes, totaling 20 distinct cytotypes. The karyotypes with 2n = 44 retain most of the variation of the genus karyotype with 11 distinct complements autosomal (NFA = 46, 48, 49, 50, 52, 54, 61, 70, 74, 76 and 80). The karyotype with 2n = 48 has three distinct cytotypes (NFA = 66, 67 and 68), whereas 2n = 50 presents two different cytotypes (NFA = 70 and 71). It was suggested that these could be divided karyotypes and three groups according to the 2n and NFA group R. nitelacomposed of animals with 2n = 48/50, group R. leucodactyluswith 2n = 44 and NFA low ranging from 46 to 52, and group R. mastacalis2n = 44 and NFA high ranging from 74 to 80. This distinction was reinforced by the existence of private alleles in some of these groups. Although data from the literature suggest that the karyotype is a good tool to assist in the characterization of species Rhipidomys, and molecular studies begin to suggest how the karyotypes of Rhipidomysare phylogenetically structured, work involving karyotypic data on molecular characterization of populations are nonexistent in Rhipidomys. Accordingly, we propose to characterize the karyotypes of Rhipidomysthe number and morphology of chromosomes; propose a molecular phylogenetic hypothesis for the forms from eastern Brazil using a new molecular marker; verify that the karyotypes distinct monophyletic clades are correlated with, and test the validity Rhipidomysgroupings based on karyotype structure: group R. leucodactylus(NFAS low) and group R. mastacalis (NFAshigh). In this study we found two new descriptions of karyotypes, a karyotype with unprecedented high NFA (NFA 2n = 44 and = 72) and another with an unprecedented combination of X and Y chromosomes (2n = 44, = 50 NFA, XbYc). Adding our data to the literature we found 22 karyotypes described for the genus Rhipidomys. Karyotypes of these 22, 14 were associated with 12 of the 21 taxa recognized in Rhipidomys, and eight karyotypes are not associated with any recognized taxon. Furthermore, we identified six species of Rhipidomysrecognized and suggest the presence of two new taxa to eastern Brazil. We find evidence that vicarious barrier in the Atlantic is marked by the Jequitinhonha river, not the Doce river, as suggested in many studies. Revealed that the group with high NFA is monophyletic, while the group with low NFA is polyphyletic and paraphyletic, a fact which goes against the hypothesis of karyotypic groups. We found that there is an upward trend in the number of autosomal arms in the genre, being more karyotypic forms derived farther from the bridge probable origin of the genus in 9South America yet, it was proposed that the source of radiation occurred RhipidomysAndes and the populations of this region carry the primitive conditions of the group, as the 2n = 44 and low NFA. From this ancestral karyotype propose a model of karyotype evolution taking into account the distribution of chromosomal forms in each regionO gênero Rhipidomys Tshudi, 1845 pertencente à tribo Thomasomyini (Steadman & Ray 1982) contempla roedores com hábitos arborícolas, noturnos e solitários. São de pequeno porte, o peso varia de 35 a 170 gramas, caracterizados por uma combinação de vibrissas longas, tufo ou pincel na extremidade distal da cauda e pelagem escura presente no dorso de suas patas dianteiras (Tribe, 1996; Emmons & Feer, 1997). Sua distribuição é ampla abrangendo desde o leste do Panamá, atravessando a América do Sul, até o norte da Argentina. No Brasil são registrados em todos os biomas. Estudos citogenéticos nesse gênero revelaram uma elevada variabilidade cariotípica, com três números diplóides 2n=44, 48 e 50, e variação do número de braços autossômicos (NFa) e dos cromossomos sexuais, totalizando 20 citótipos distintos. Os cariótipos com 2n=44 retêm a maior parte da variação cariotípica do gênero com 11 complementos autossômicos distintos (NFa=46, 48, 49, 50, 52, 54, 61, 70, 74, 76 e 80). O cariótipo com 2n=48 possui três citótipos distintos (NFa=66, 67 e 68), enquanto que o 2n=50 apresenta dois citótipos diferentes (NFa=70 e 71). Foi sugerido que esses cariótipos poderiam ser divididos e três grupos de acordo com o 2n e NFa, grupo R. nitela composto pelos animais com o 2n=48/50; grupo R. leucodactylus com 2n=44 e NFa baixo que varia de 46 a 52; e grupo R. mastacalis 2n=44 e NFa alto variando de 74 a 80. Essa distinção foi reforçada pela existência de alelos exclusivos em alguns desses grupos. Apesar dos dados da literatura sugerirem que o cariótipo seja uma boa ferramenta para auxiliar na caracterização de espécies de Rhipidomys, e estudos moleculares começarem a sugerir como os cariótipos de Rhipidomys estão estruturados filogeneticamente, trabalhos que associem dados cariotípicos à caracterização molecular das populações são inexistentes em Rhipidomys. Nesse sentido, propomos caracterizar os cariótipos de Rhipidomys quanto ao número e morfologia dos cromossomos; propor uma hipótese filogenética molecular para as formas do leste do Brasil usando um novo marcador molecular; verificar se os cariótipos distintos estão correlacionados com clados monofiléticos; e testar a validade dos agrupamentos Rhipidomys baseados na estruturação cariotípica: grupo R. leucodactylus (NFas baixos) e grupo R. mastacalis (NFas altos). Neste estudo encontramos duas novas descrições de cariótipos, um cariótipo com NFa alto inédito (2n=44 e NFa=72) e outro com uma combinação inédita de cromossomos X e Y (2n=44, NFa=50, XbYc). Adicionando nossos dados aos da literatura observou-se 22 cariótipos descritos para o gênero Rhipidomys. Desses 22 cariótipos, 14 foram associados a 12 dos 21 táxons reconhecidos em Rhipidomys, e oito cariótipos não estão associados a nenhum táxon reconhecido. Além disso, identificamos seis espécies de Rhipidomys reconhecidas e sugerimos a presença de mais dois novos táxons para o leste do Brasil. Encontramos indícios que a barreira vicariante na Mata Atlântica é marcada pelo rio Jequitinhonha e não pelo rio Doce, como sugerido em muitos trabalhos. Revelamos que o grupo com NFa alto é monofilético, enquanto o grupo com NFa baixo é polifilético e parafilético, fato esse que vai de encontro com a hipótese dos agrupamentos cariotípicos. Descobrimos que há uma tendência do aumento no número de braços autossômicos no gênero, encontrando-se as formas cariotípicas mais derivadas a mais distantes do provável ponte de origem do gênero na América do Sul. Ainda, foi proposto que a origem da radiação de Rhipidomys ocorreu nos Andes e as populações dessa região carregaria as condições primitivas do grupo, como o 2n=44 e o NFa baixo. A partir desse cariótipo ancestral propomos um modelo de evolução cariotípica levando em consideração na distribuição das formas cromossômicas em cada região.TextTHOMAZINI, Núbia Badke. Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil. 2013. 99 f. Dissertação (Mestrado em Biologia Animal) - Universidade Federal do Espírito Santo, Centro de Ciências Humanas e Naturais, Vitória, 2013.http://repositorio.ufes.br/handle/10/3815porUniversidade Federal do Espírito SantoMestrado em Biologia AnimalPrograma de Pós-Graduação em Ciências BiológicasUFESBRKaryotypePhylogenyNeotropicalRhipidomysCariótiposFilogeniaRoedorZoologia57Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da Universidade Federal do Espírito Santo (riUfes)instname:Universidade Federal do Espírito Santo (UFES)instacron:UFESORIGINALNúbia Badke.pdfapplication/pdf2157261http://repositorio.ufes.br/bitstreams/7af98a5f-bafb-49eb-8dac-8016e2f05cc5/download36fefc4430063ff1e87024b952e34d25MD5110/38152024-07-01 16:23:46.542oai:repositorio.ufes.br:10/3815http://repositorio.ufes.brRepositório InstitucionalPUBhttp://repositorio.ufes.br/oai/requestopendoar:21082024-07-11T14:30:16.993387Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) - Universidade Federal do Espírito Santo (UFES)false |
dc.title.none.fl_str_mv |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
title |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
spellingShingle |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil Thomazini, Núbia Badke Karyotype Phylogeny Neotropical Rhipidomys Zoologia Cariótipos Filogenia Roedor 57 |
title_short |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
title_full |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
title_fullStr |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
title_full_unstemmed |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
title_sort |
Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil |
author |
Thomazini, Núbia Badke |
author_facet |
Thomazini, Núbia Badke |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Fagundes, Valéria |
dc.contributor.author.fl_str_mv |
Thomazini, Núbia Badke |
dc.contributor.referee1.fl_str_mv |
Azevedo, Celso Oliveira |
dc.contributor.referee2.fl_str_mv |
Costa, Leonora Pires |
dc.contributor.referee3.fl_str_mv |
Geise, Lena |
contributor_str_mv |
Fagundes, Valéria Azevedo, Celso Oliveira Costa, Leonora Pires Geise, Lena |
dc.subject.eng.fl_str_mv |
Karyotype Phylogeny |
topic |
Karyotype Phylogeny Neotropical Rhipidomys Zoologia Cariótipos Filogenia Roedor 57 |
dc.subject.por.fl_str_mv |
Neotropical Rhipidomys |
dc.subject.cnpq.fl_str_mv |
Zoologia |
dc.subject.br-rjbn.none.fl_str_mv |
Cariótipos Filogenia Roedor |
dc.subject.udc.none.fl_str_mv |
57 |
description |
The genus RhipidomysTshudi, 1845 belonging to the tribe Thomasomyini(Ray Steadman & 1982) includes rodents with arboreal habits, nocturnal and solitary. Are small, the weight varies from 35 to 170 grams, characterized by a combination of long vibrissae, brush or tuft at thedistal tail and dark coats this on the back of their front legs (Tribe, 1996; Emmons & Feer, 1997 ). It is widely distributed ranging from east of Panama, crossing South America to northern Argentina. In Brazil are recorded in all biomes. Cytogenetic studies in this genus revealed a high karyotypic variability, with three diploid numbers 2n = 44, 48 and 50, and varying the number of autosomal arms (NFA) and the sex chromosomes, totaling 20 distinct cytotypes. The karyotypes with 2n = 44 retain most of the variation of the genus karyotype with 11 distinct complements autosomal (NFA = 46, 48, 49, 50, 52, 54, 61, 70, 74, 76 and 80). The karyotype with 2n = 48 has three distinct cytotypes (NFA = 66, 67 and 68), whereas 2n = 50 presents two different cytotypes (NFA = 70 and 71). It was suggested that these could be divided karyotypes and three groups according to the 2n and NFA group R. nitelacomposed of animals with 2n = 48/50, group R. leucodactyluswith 2n = 44 and NFA low ranging from 46 to 52, and group R. mastacalis2n = 44 and NFA high ranging from 74 to 80. This distinction was reinforced by the existence of private alleles in some of these groups. Although data from the literature suggest that the karyotype is a good tool to assist in the characterization of species Rhipidomys, and molecular studies begin to suggest how the karyotypes of Rhipidomysare phylogenetically structured, work involving karyotypic data on molecular characterization of populations are nonexistent in Rhipidomys. Accordingly, we propose to characterize the karyotypes of Rhipidomysthe number and morphology of chromosomes; propose a molecular phylogenetic hypothesis for the forms from eastern Brazil using a new molecular marker; verify that the karyotypes distinct monophyletic clades are correlated with, and test the validity Rhipidomysgroupings based on karyotype structure: group R. leucodactylus(NFAS low) and group R. mastacalis (NFAshigh). In this study we found two new descriptions of karyotypes, a karyotype with unprecedented high NFA (NFA 2n = 44 and = 72) and another with an unprecedented combination of X and Y chromosomes (2n = 44, = 50 NFA, XbYc). Adding our data to the literature we found 22 karyotypes described for the genus Rhipidomys. Karyotypes of these 22, 14 were associated with 12 of the 21 taxa recognized in Rhipidomys, and eight karyotypes are not associated with any recognized taxon. Furthermore, we identified six species of Rhipidomysrecognized and suggest the presence of two new taxa to eastern Brazil. We find evidence that vicarious barrier in the Atlantic is marked by the Jequitinhonha river, not the Doce river, as suggested in many studies. Revealed that the group with high NFA is monophyletic, while the group with low NFA is polyphyletic and paraphyletic, a fact which goes against the hypothesis of karyotypic groups. We found that there is an upward trend in the number of autosomal arms in the genre, being more karyotypic forms derived farther from the bridge probable origin of the genus in 9South America yet, it was proposed that the source of radiation occurred RhipidomysAndes and the populations of this region carry the primitive conditions of the group, as the 2n = 44 and low NFA. From this ancestral karyotype propose a model of karyotype evolution taking into account the distribution of chromosomal forms in each region |
publishDate |
2009 |
dc.date.issued.fl_str_mv |
2009-03-23 |
dc.date.accessioned.fl_str_mv |
2016-08-29T15:09:09Z |
dc.date.available.fl_str_mv |
2016-07-11 2016-08-29T15:09:09Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
THOMAZINI, Núbia Badke. Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil. 2013. 99 f. Dissertação (Mestrado em Biologia Animal) - Universidade Federal do Espírito Santo, Centro de Ciências Humanas e Naturais, Vitória, 2013. |
dc.identifier.uri.fl_str_mv |
http://repositorio.ufes.br/handle/10/3815 |
identifier_str_mv |
THOMAZINI, Núbia Badke. Correlação entre estrutura cariotípica e filogenia molecular em Rhipidomys (Cricetidae, Rodentia) do leste do Brasil. 2013. 99 f. Dissertação (Mestrado em Biologia Animal) - Universidade Federal do Espírito Santo, Centro de Ciências Humanas e Naturais, Vitória, 2013. |
url |
http://repositorio.ufes.br/handle/10/3815 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
Text |
dc.publisher.none.fl_str_mv |
Universidade Federal do Espírito Santo Mestrado em Biologia Animal |
dc.publisher.program.fl_str_mv |
Programa de Pós-Graduação em Ciências Biológicas |
dc.publisher.initials.fl_str_mv |
UFES |
dc.publisher.country.fl_str_mv |
BR |
publisher.none.fl_str_mv |
Universidade Federal do Espírito Santo Mestrado em Biologia Animal |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) instname:Universidade Federal do Espírito Santo (UFES) instacron:UFES |
instname_str |
Universidade Federal do Espírito Santo (UFES) |
instacron_str |
UFES |
institution |
UFES |
reponame_str |
Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) |
collection |
Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) |
bitstream.url.fl_str_mv |
http://repositorio.ufes.br/bitstreams/7af98a5f-bafb-49eb-8dac-8016e2f05cc5/download |
bitstream.checksum.fl_str_mv |
36fefc4430063ff1e87024b952e34d25 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 |
repository.name.fl_str_mv |
Repositório Institucional da Universidade Federal do Espírito Santo (riUfes) - Universidade Federal do Espírito Santo (UFES) |
repository.mail.fl_str_mv |
|
_version_ |
1813022600873377792 |