Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
dARK ID: | ark:/38995/0013000002jbq |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/4568 |
Resumo: | The genus Paracoccidioides comprises a complex of phylogenetic species of dimorphic pathogenic fungi, the etiologic agents of paracoccidioidomycosis (PCM), a disease confined to Latin America and of marked relevance in its endemic areas due to its high frequency and severity. The members of the Paracoccidioides genus are distributed in distinct phylogenetic species (S1, PS2, PS3 and 01-like) that potentially differ in their biochemical and molecular characteristics. In this work, we performed the proteomic characterization of different members of the genus Paracoccidioides. We compared the proteomic profiles of Pb01 (01-like), Pb2 (PS2), Pb339 (S1) and PbEPM83 (PS3) using 2D electrophoresis and mass spectrometry. The proteins/isoforms were selected based on the staining intensity of the spots as determined by image analysis. The proteins/isoforms were in-gel digested and identified by peptide mass fingerprinting and ion fragmentation. A total of 714 spots were detected, of which 343 were analyzed. From these spots, 301 represented differentially expressed proteins/isoforms among the four analyzed isolates, as determined by ANOVA. After applying the FDR correction, a total of 267 spots were determined to be differentially expressed. From the total, 193 proteins/isoforms were identified by PMF and confirmed by ion fragmentation. Comparing the expression profiles of the isolates, the proteins/isoforms that were related to glycolysis/gluconeogenesis and to alcohol fermentation were more abundant in Pb01 than in other representatives of the genus Paracoccidioides, indicating a higher use of anaerobic pathways for energy production. Those enzymes related to the oxidative stress response were more abundant in Pb01, Pb2 and Pb339, indicating a better response to ROS in these members of the Paracoccidioides complex. The enzymes of the pentose phosphate pathway were abundant in Pb2. Antigenic proteins, such as GP43 and a 27-kDa antigenic protein, were less abundant in Pb01 and Pb2. The proteomic profile indicates metabolic differences among the analyzed members of the Paracoccidioides genus. |
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Soares, Célia Maria de Almeidahttp://lattes.cnpq.br/8539946335852637Parente, Ana Flávia AlvesSoares, Célia Maria de AlmeidaParente, Juliana AlvesZancopé-Oliveira, Rosely Mariahttp://lattes.cnpq.br/0594830298555616Pigosso, Laurine Lacerda2015-05-22T12:33:01Z2012-07-31PIGOSSO, L. L. Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides. 2012. 55 f. Dissertação (Mestrado em Biologia) - Universidade Federal de Goiás, Goiânia, 2012.http://repositorio.bc.ufg.br/tede/handle/tede/4568ark:/38995/0013000002jbqThe genus Paracoccidioides comprises a complex of phylogenetic species of dimorphic pathogenic fungi, the etiologic agents of paracoccidioidomycosis (PCM), a disease confined to Latin America and of marked relevance in its endemic areas due to its high frequency and severity. The members of the Paracoccidioides genus are distributed in distinct phylogenetic species (S1, PS2, PS3 and 01-like) that potentially differ in their biochemical and molecular characteristics. In this work, we performed the proteomic characterization of different members of the genus Paracoccidioides. We compared the proteomic profiles of Pb01 (01-like), Pb2 (PS2), Pb339 (S1) and PbEPM83 (PS3) using 2D electrophoresis and mass spectrometry. The proteins/isoforms were selected based on the staining intensity of the spots as determined by image analysis. The proteins/isoforms were in-gel digested and identified by peptide mass fingerprinting and ion fragmentation. A total of 714 spots were detected, of which 343 were analyzed. From these spots, 301 represented differentially expressed proteins/isoforms among the four analyzed isolates, as determined by ANOVA. After applying the FDR correction, a total of 267 spots were determined to be differentially expressed. From the total, 193 proteins/isoforms were identified by PMF and confirmed by ion fragmentation. Comparing the expression profiles of the isolates, the proteins/isoforms that were related to glycolysis/gluconeogenesis and to alcohol fermentation were more abundant in Pb01 than in other representatives of the genus Paracoccidioides, indicating a higher use of anaerobic pathways for energy production. Those enzymes related to the oxidative stress response were more abundant in Pb01, Pb2 and Pb339, indicating a better response to ROS in these members of the Paracoccidioides complex. The enzymes of the pentose phosphate pathway were abundant in Pb2. Antigenic proteins, such as GP43 and a 27-kDa antigenic protein, were less abundant in Pb01 and Pb2. The proteomic profile indicates metabolic differences among the analyzed members of the Paracoccidioides genus.O gênero Paracoccidioides compreende um complexo de espécies filogenéticas do fungo patogênico dimórfico, agente etiológico da paracoccidioidomicose (PCM), uma doença restrita à América Latina e de relevância acentuada em suas áreas endêmicas, devido à sua alta frequência e gravidade. Os membros do gênero Paracoccidioides são distribuídos em espécies filogenéticas distintas (S1, PS2, PS3 e 01-like) que diferem potencialmente nas suas características bioquímicas e moleculares. Neste trabalho, foi realizada a caracterização proteômica de diferentes membros do gênero Paracoccidioides. Foram comparados os perfis proteômicos de Pb01 (01-like), Pb2 (PS2), Pb339 (S1) e PbEPM83 (PS3) utilizando eletroforese 2D e espectrometria de massa. As proteínas / isoformas foram selecionados com base na intensidade de coloração dos spots conforme determinado por análise de imagem. As proteínas / isoformas foram excisadas do gel, digeridas e identificadas por PMF (Peptide mass fingerprinting) e fragmentação iônica. Um total de 714 spots foi detectado, 343 foram analisados. A partir destes spots, 301 apresentaram-se diferencialmente expressos entre os quatro isolados analisados, determinado por ANOVA. Depois de aplicar a correção FDR, um total de 267 spots foram diferencialmente expressos. Do total, 193 / isoformas proteínas foram identificadas por PMF e confirmadas por fragmentação iônica. Comparando-se os perfis de expressão dos isolados, as proteínas / isoformas que foram relacionados para a glicólise / gliconeogênese e fermentação alcoólica foram mais abundantes em Pb01 do que em outros representantes do gênero Paracoccidioides, indicando uma maior utilização das vias anaeróbias para a produção de energia. Enzimas relacionadas com a resposta ao estresse oxidativo foram mais abundantes em Pb01, Pb2 e Pb339, indicando uma melhor resposta às ROS nestes membros do complexo Paracoccidioides. As enzimas da via das pentoses foram abundantes em Pb2. Proteínas antigênicas, tal como GP43 e uma proteína antigênica de 27 kDa, foram menos abundantes em Pb01 e Pb2. O perfil proteômico indica diferenças metabólicas entre os membros analisados do gênero Paracoccidioides.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2015-05-22T12:28:36Z No. of bitstreams: 2 Dissertação - Laurine Lacerda Pigosso - 2012.pdf: 3120628 bytes, checksum: 05c24b721e04453fce0116ba2470c24a (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2015-05-22T12:33:01Z (GMT) No. of bitstreams: 2 Dissertação - Laurine Lacerda Pigosso - 2012.pdf: 3120628 bytes, checksum: 05c24b721e04453fce0116ba2470c24a (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Made available in DSpace on 2015-05-22T12:33:01Z (GMT). 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dc.title.por.fl_str_mv |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
dc.title.alternative.eng.fl_str_mv |
Proteomic maps of members of the Paracoccidioides complex |
title |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
spellingShingle |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides Pigosso, Laurine Lacerda Paracoccidioides Espécies filogenéticas Proteoma Paracoccidioides Phylogenetic species Proteome CIENCIAS BIOLOGICAS::BIOLOGIA GERAL |
title_short |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
title_full |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
title_fullStr |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
title_full_unstemmed |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
title_sort |
Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides |
author |
Pigosso, Laurine Lacerda |
author_facet |
Pigosso, Laurine Lacerda |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Soares, Célia Maria de Almeida |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/8539946335852637 |
dc.contributor.advisor-co1.fl_str_mv |
Parente, Ana Flávia Alves |
dc.contributor.referee1.fl_str_mv |
Soares, Célia Maria de Almeida |
dc.contributor.referee2.fl_str_mv |
Parente, Juliana Alves |
dc.contributor.referee3.fl_str_mv |
Zancopé-Oliveira, Rosely Maria |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/0594830298555616 |
dc.contributor.author.fl_str_mv |
Pigosso, Laurine Lacerda |
contributor_str_mv |
Soares, Célia Maria de Almeida Parente, Ana Flávia Alves Soares, Célia Maria de Almeida Parente, Juliana Alves Zancopé-Oliveira, Rosely Maria |
dc.subject.por.fl_str_mv |
Paracoccidioides Espécies filogenéticas Proteoma |
topic |
Paracoccidioides Espécies filogenéticas Proteoma Paracoccidioides Phylogenetic species Proteome CIENCIAS BIOLOGICAS::BIOLOGIA GERAL |
dc.subject.eng.fl_str_mv |
Paracoccidioides Phylogenetic species Proteome |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::BIOLOGIA GERAL |
description |
The genus Paracoccidioides comprises a complex of phylogenetic species of dimorphic pathogenic fungi, the etiologic agents of paracoccidioidomycosis (PCM), a disease confined to Latin America and of marked relevance in its endemic areas due to its high frequency and severity. The members of the Paracoccidioides genus are distributed in distinct phylogenetic species (S1, PS2, PS3 and 01-like) that potentially differ in their biochemical and molecular characteristics. In this work, we performed the proteomic characterization of different members of the genus Paracoccidioides. We compared the proteomic profiles of Pb01 (01-like), Pb2 (PS2), Pb339 (S1) and PbEPM83 (PS3) using 2D electrophoresis and mass spectrometry. The proteins/isoforms were selected based on the staining intensity of the spots as determined by image analysis. The proteins/isoforms were in-gel digested and identified by peptide mass fingerprinting and ion fragmentation. A total of 714 spots were detected, of which 343 were analyzed. From these spots, 301 represented differentially expressed proteins/isoforms among the four analyzed isolates, as determined by ANOVA. After applying the FDR correction, a total of 267 spots were determined to be differentially expressed. From the total, 193 proteins/isoforms were identified by PMF and confirmed by ion fragmentation. Comparing the expression profiles of the isolates, the proteins/isoforms that were related to glycolysis/gluconeogenesis and to alcohol fermentation were more abundant in Pb01 than in other representatives of the genus Paracoccidioides, indicating a higher use of anaerobic pathways for energy production. Those enzymes related to the oxidative stress response were more abundant in Pb01, Pb2 and Pb339, indicating a better response to ROS in these members of the Paracoccidioides complex. The enzymes of the pentose phosphate pathway were abundant in Pb2. Antigenic proteins, such as GP43 and a 27-kDa antigenic protein, were less abundant in Pb01 and Pb2. The proteomic profile indicates metabolic differences among the analyzed members of the Paracoccidioides genus. |
publishDate |
2012 |
dc.date.issued.fl_str_mv |
2012-07-31 |
dc.date.accessioned.fl_str_mv |
2015-05-22T12:33:01Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
PIGOSSO, L. L. Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides. 2012. 55 f. Dissertação (Mestrado em Biologia) - Universidade Federal de Goiás, Goiânia, 2012. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/4568 |
dc.identifier.dark.fl_str_mv |
ark:/38995/0013000002jbq |
identifier_str_mv |
PIGOSSO, L. L. Mapa proteômico de espécies filogenéticas do complexo Paracoccidioides. 2012. 55 f. Dissertação (Mestrado em Biologia) - Universidade Federal de Goiás, Goiânia, 2012. ark:/38995/0013000002jbq |
url |
http://repositorio.bc.ufg.br/tede/handle/tede/4568 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.program.fl_str_mv |
6883982777473437920 |
dc.relation.confidence.fl_str_mv |
600 600 600 600 |
dc.relation.department.fl_str_mv |
-3872772117827373404 |
dc.relation.cnpq.fl_str_mv |
-1634559385931244697 |
dc.relation.sponsorship.fl_str_mv |
-2555911436985713659 |
dc.rights.driver.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.publisher.program.fl_str_mv |
Programa de Pós-graduação em Biologia (ICB) |
dc.publisher.initials.fl_str_mv |
UFG |
dc.publisher.country.fl_str_mv |
Brasil |
dc.publisher.department.fl_str_mv |
Instituto de Ciências Biológicas - ICB (RG) |
publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFG instname:Universidade Federal de Goiás (UFG) instacron:UFG |
instname_str |
Universidade Federal de Goiás (UFG) |
instacron_str |
UFG |
institution |
UFG |
reponame_str |
Repositório Institucional da UFG |
collection |
Repositório Institucional da UFG |
bitstream.url.fl_str_mv |
http://repositorio.bc.ufg.br/tede/bitstreams/23ae3b7c-e0cd-4d6f-8e7b-b0c44c8785d7/download http://repositorio.bc.ufg.br/tede/bitstreams/5fe6e8b8-e725-4e4a-89ac-84560f908f9b/download http://repositorio.bc.ufg.br/tede/bitstreams/a21d9e0f-973c-4cdd-9c87-fda165c7ea75/download http://repositorio.bc.ufg.br/tede/bitstreams/00afe8d0-984f-4b3f-9652-56439c240266/download http://repositorio.bc.ufg.br/tede/bitstreams/4c20eece-908e-45f8-933c-1cdc3c4b09b7/download http://repositorio.bc.ufg.br/tede/bitstreams/608b39e8-843a-46d8-b01b-88556e841ac7/download http://repositorio.bc.ufg.br/tede/bitstreams/853a6e51-d81f-4068-9f65-81152808e24f/download |
bitstream.checksum.fl_str_mv |
bd3efa91386c1718a7f26a329fdcb468 4afdbb8c545fd630ea7db775da747b2f 706fa86f01594bbd4ec888ac35076615 9da0b6dfac957114c6a7714714b86306 05c24b721e04453fce0116ba2470c24a 21d2fecf70b7f512caa0b9bcb490ce77 baccb63d8be491e1608aa001a269b425 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFG - Universidade Federal de Goiás (UFG) |
repository.mail.fl_str_mv |
tasesdissertacoes.bc@ufg.br |
_version_ |
1815172536127717376 |