Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
dARK ID: | ark:/38995/0013000002vd7 |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/9742 |
Resumo: | Paracoccidioidomycosis (PCM) is a systemic mycosis, caused by thermally dimorphic fungus Paracoccidioides spp., common in Latin America. PCM treatment is long-term chemotherapeutic approach and causes adverse effects. The study goal was drug repositioning with more efficient and safer PCM treatment. It was used data from different lineages of Paracoccidioides spp., Pb01, Pb03 and Pb18. The orthologous proteins were selected from the protein comparison of three isolates, posteriorly, those proteins were compared with proteins of two drugs databases, DrugBank and Therapeutic Target Database (TTD) aiming to identify drugs that had those proteins as target. The Blast P was performed to analyze the percentage of similar character between fungus proteins with drugs banks proteins. Posteriorly, Paracoccidioides spp. proteins were compared with Saccharomyces cerevisiae essential proteins, getting 45 orthologous proteins that were submitted to homology modeling and molecular docking. The results were analyzed, and 17 compounds were selected to be tested in vitro for in silico results confirmation. |
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Pereira, Maristelahttp://lattes.cnpq.br/1345781867765758Horta, Carolina Andradehttp://lattes.cnpq.br/2018317447324228Pereira, MaristelaRossi, Nilce Maria MartinezMottin, MelinaAmaral, André CorreaNeves, Bruno Juniorhttp://lattes.cnpq.br/0037945654773273Oliveira, Amanda Alves de2019-06-27T12:49:30Z2018-03-07OLIVEIRA, Amanda Alves de. Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose. 2018. 118 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2018.http://repositorio.bc.ufg.br/tede/handle/tede/9742ark:/38995/0013000002vd7Paracoccidioidomycosis (PCM) is a systemic mycosis, caused by thermally dimorphic fungus Paracoccidioides spp., common in Latin America. PCM treatment is long-term chemotherapeutic approach and causes adverse effects. The study goal was drug repositioning with more efficient and safer PCM treatment. It was used data from different lineages of Paracoccidioides spp., Pb01, Pb03 and Pb18. The orthologous proteins were selected from the protein comparison of three isolates, posteriorly, those proteins were compared with proteins of two drugs databases, DrugBank and Therapeutic Target Database (TTD) aiming to identify drugs that had those proteins as target. The Blast P was performed to analyze the percentage of similar character between fungus proteins with drugs banks proteins. Posteriorly, Paracoccidioides spp. proteins were compared with Saccharomyces cerevisiae essential proteins, getting 45 orthologous proteins that were submitted to homology modeling and molecular docking. The results were analyzed, and 17 compounds were selected to be tested in vitro for in silico results confirmation.A paracoccidioidomicose (PCM) é uma micose sistêmica, causada pelos fungos termo dimórficos Paracoccidioides spp, comum na América Latina. O tratamento da PCM é de longa duração, feito com quimioterápicos que causam efeitos adversos. O objetivo desse trabalho foi reposicionar fármacos mais seguros e com maior eficácia para o tratamento da PCM. Foram utilizados dados de diferentes linhagens de Paracoccidioides spp. Pb01, Pb03 e Pb18. As proteínas ortólogas foram selecionadas a partir da comparação das proteínas dos três isolados, posteriormente, essas proteínas foram comparadas com as proteínas dos bancos de dados DrugBank e Therapeutic Target Database (TTD), visando a identificação de fármacos que tivessem essas proteínas como alvo. O blast P foi realizado para analisar a porcentagem de caracteres similares existente entre as proteínas do fungo com as proteínas dos bancos de fármacos. Em seguida, as proteínas ortólogas foram comparadas com os genes essenciais de Saccharomyces cerevisiae, obtendo, 45 proteínas ortólogas que foram submetidas a modelagem por homologia e ancoragem molecular. Os resultados foram analisados e 17 fármacos selecionados para a validação dos resultados in silico, por intermédio de testes in vitro.Submitted by Marlene Santos (marlene.bc.ufg@gmail.com) on 2019-06-25T17:06:56Z No. of bitstreams: 2 Dissertação - Amanda Alves de Oliveira - 2018.pdf: 5016636 bytes, checksum: c2c4efa331301346f2bc617903b7b03d (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2019-06-27T12:49:30Z (GMT) No. of bitstreams: 2 Dissertação - Amanda Alves de Oliveira - 2018.pdf: 5016636 bytes, checksum: c2c4efa331301346f2bc617903b7b03d (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2019-06-27T12:49:30Z (GMT). No. of bitstreams: 2 Dissertação - Amanda Alves de Oliveira - 2018.pdf: 5016636 bytes, checksum: c2c4efa331301346f2bc617903b7b03d (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2018-03-07Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Medicina Tropical e Saúde Publica (IPTSP)UFGBrasilInstituto de Patologia Tropical e Saúde Pública - IPTSP (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessParacoccidioides sppParacoccidioidomicoseReposicionamento de fármacosHomologiaAncoragem molecularParacoccidioidomycosisDrug repositioningHomologyMolecular dockingCIENCIAS BIOLOGICAS::MICROBIOLOGIAReposicionamento in silico de fármacos para tratamento da ParacoccidioidomicoseDrug repositioning in silico for Paracoccidioidomycosis treatmentinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis6085308344741430434600600600600-7769011444564556288-3854583469976220812-2555911436985713659reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.eng.fl_str_mv |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
dc.title.alternative.eng.fl_str_mv |
Drug repositioning in silico for Paracoccidioidomycosis treatment |
title |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
spellingShingle |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose Oliveira, Amanda Alves de Paracoccidioides spp Paracoccidioidomicose Reposicionamento de fármacos Homologia Ancoragem molecular Paracoccidioidomycosis Drug repositioning Homology Molecular docking CIENCIAS BIOLOGICAS::MICROBIOLOGIA |
title_short |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
title_full |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
title_fullStr |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
title_full_unstemmed |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
title_sort |
Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose |
author |
Oliveira, Amanda Alves de |
author_facet |
Oliveira, Amanda Alves de |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Pereira, Maristela |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/1345781867765758 |
dc.contributor.advisor-co1.fl_str_mv |
Horta, Carolina Andrade |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://lattes.cnpq.br/2018317447324228 |
dc.contributor.referee1.fl_str_mv |
Pereira, Maristela |
dc.contributor.referee2.fl_str_mv |
Rossi, Nilce Maria Martinez |
dc.contributor.referee3.fl_str_mv |
Mottin, Melina |
dc.contributor.referee4.fl_str_mv |
Amaral, André Correa |
dc.contributor.referee5.fl_str_mv |
Neves, Bruno Junior |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/0037945654773273 |
dc.contributor.author.fl_str_mv |
Oliveira, Amanda Alves de |
contributor_str_mv |
Pereira, Maristela Horta, Carolina Andrade Pereira, Maristela Rossi, Nilce Maria Martinez Mottin, Melina Amaral, André Correa Neves, Bruno Junior |
dc.subject.por.fl_str_mv |
Paracoccidioides spp Paracoccidioidomicose Reposicionamento de fármacos Homologia Ancoragem molecular |
topic |
Paracoccidioides spp Paracoccidioidomicose Reposicionamento de fármacos Homologia Ancoragem molecular Paracoccidioidomycosis Drug repositioning Homology Molecular docking CIENCIAS BIOLOGICAS::MICROBIOLOGIA |
dc.subject.eng.fl_str_mv |
Paracoccidioidomycosis Drug repositioning Homology Molecular docking |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS::MICROBIOLOGIA |
description |
Paracoccidioidomycosis (PCM) is a systemic mycosis, caused by thermally dimorphic fungus Paracoccidioides spp., common in Latin America. PCM treatment is long-term chemotherapeutic approach and causes adverse effects. The study goal was drug repositioning with more efficient and safer PCM treatment. It was used data from different lineages of Paracoccidioides spp., Pb01, Pb03 and Pb18. The orthologous proteins were selected from the protein comparison of three isolates, posteriorly, those proteins were compared with proteins of two drugs databases, DrugBank and Therapeutic Target Database (TTD) aiming to identify drugs that had those proteins as target. The Blast P was performed to analyze the percentage of similar character between fungus proteins with drugs banks proteins. Posteriorly, Paracoccidioides spp. proteins were compared with Saccharomyces cerevisiae essential proteins, getting 45 orthologous proteins that were submitted to homology modeling and molecular docking. The results were analyzed, and 17 compounds were selected to be tested in vitro for in silico results confirmation. |
publishDate |
2018 |
dc.date.issued.fl_str_mv |
2018-03-07 |
dc.date.accessioned.fl_str_mv |
2019-06-27T12:49:30Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
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masterThesis |
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publishedVersion |
dc.identifier.citation.fl_str_mv |
OLIVEIRA, Amanda Alves de. Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose. 2018. 118 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2018. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/9742 |
dc.identifier.dark.fl_str_mv |
ark:/38995/0013000002vd7 |
identifier_str_mv |
OLIVEIRA, Amanda Alves de. Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose. 2018. 118 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2018. ark:/38995/0013000002vd7 |
url |
http://repositorio.bc.ufg.br/tede/handle/tede/9742 |
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por |
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http://creativecommons.org/licenses/by-nc-nd/4.0/ |
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openAccess |
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Universidade Federal de Goiás |
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Brasil |
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Universidade Federal de Goiás |
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