Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose

Detalhes bibliográficos
Autor(a) principal: Oliveira, Amanda Alves de
Data de Publicação: 2018
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFG
dARK ID: ark:/38995/0013000002vd7
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/9742
Resumo: Paracoccidioidomycosis (PCM) is a systemic mycosis, caused by thermally dimorphic fungus Paracoccidioides spp., common in Latin America. PCM treatment is long-term chemotherapeutic approach and causes adverse effects. The study goal was drug repositioning with more efficient and safer PCM treatment. It was used data from different lineages of Paracoccidioides spp., Pb01, Pb03 and Pb18. The orthologous proteins were selected from the protein comparison of three isolates, posteriorly, those proteins were compared with proteins of two drugs databases, DrugBank and Therapeutic Target Database (TTD) aiming to identify drugs that had those proteins as target. The Blast P was performed to analyze the percentage of similar character between fungus proteins with drugs banks proteins. Posteriorly, Paracoccidioides spp. proteins were compared with Saccharomyces cerevisiae essential proteins, getting 45 orthologous proteins that were submitted to homology modeling and molecular docking. The results were analyzed, and 17 compounds were selected to be tested in vitro for in silico results confirmation.
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spelling Pereira, Maristelahttp://lattes.cnpq.br/1345781867765758Horta, Carolina Andradehttp://lattes.cnpq.br/2018317447324228Pereira, MaristelaRossi, Nilce Maria MartinezMottin, MelinaAmaral, André CorreaNeves, Bruno Juniorhttp://lattes.cnpq.br/0037945654773273Oliveira, Amanda Alves de2019-06-27T12:49:30Z2018-03-07OLIVEIRA, Amanda Alves de. Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose. 2018. 118 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2018.http://repositorio.bc.ufg.br/tede/handle/tede/9742ark:/38995/0013000002vd7Paracoccidioidomycosis (PCM) is a systemic mycosis, caused by thermally dimorphic fungus Paracoccidioides spp., common in Latin America. PCM treatment is long-term chemotherapeutic approach and causes adverse effects. The study goal was drug repositioning with more efficient and safer PCM treatment. It was used data from different lineages of Paracoccidioides spp., Pb01, Pb03 and Pb18. The orthologous proteins were selected from the protein comparison of three isolates, posteriorly, those proteins were compared with proteins of two drugs databases, DrugBank and Therapeutic Target Database (TTD) aiming to identify drugs that had those proteins as target. The Blast P was performed to analyze the percentage of similar character between fungus proteins with drugs banks proteins. Posteriorly, Paracoccidioides spp. proteins were compared with Saccharomyces cerevisiae essential proteins, getting 45 orthologous proteins that were submitted to homology modeling and molecular docking. The results were analyzed, and 17 compounds were selected to be tested in vitro for in silico results confirmation.A paracoccidioidomicose (PCM) é uma micose sistêmica, causada pelos fungos termo dimórficos Paracoccidioides spp, comum na América Latina. O tratamento da PCM é de longa duração, feito com quimioterápicos que causam efeitos adversos. O objetivo desse trabalho foi reposicionar fármacos mais seguros e com maior eficácia para o tratamento da PCM. Foram utilizados dados de diferentes linhagens de Paracoccidioides spp. Pb01, Pb03 e Pb18. As proteínas ortólogas foram selecionadas a partir da comparação das proteínas dos três isolados, posteriormente, essas proteínas foram comparadas com as proteínas dos bancos de dados DrugBank e Therapeutic Target Database (TTD), visando a identificação de fármacos que tivessem essas proteínas como alvo. O blast P foi realizado para analisar a porcentagem de caracteres similares existente entre as proteínas do fungo com as proteínas dos bancos de fármacos. Em seguida, as proteínas ortólogas foram comparadas com os genes essenciais de Saccharomyces cerevisiae, obtendo, 45 proteínas ortólogas que foram submetidas a modelagem por homologia e ancoragem molecular. Os resultados foram analisados e 17 fármacos selecionados para a validação dos resultados in silico, por intermédio de testes in vitro.Submitted by Marlene Santos (marlene.bc.ufg@gmail.com) on 2019-06-25T17:06:56Z No. of bitstreams: 2 Dissertação - Amanda Alves de Oliveira - 2018.pdf: 5016636 bytes, checksum: c2c4efa331301346f2bc617903b7b03d (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2019-06-27T12:49:30Z (GMT) No. of bitstreams: 2 Dissertação - Amanda Alves de Oliveira - 2018.pdf: 5016636 bytes, checksum: c2c4efa331301346f2bc617903b7b03d (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2019-06-27T12:49:30Z (GMT). No. of bitstreams: 2 Dissertação - Amanda Alves de Oliveira - 2018.pdf: 5016636 bytes, checksum: c2c4efa331301346f2bc617903b7b03d (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) Previous issue date: 2018-03-07Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Medicina Tropical e Saúde Publica (IPTSP)UFGBrasilInstituto de Patologia Tropical e Saúde Pública - IPTSP (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessParacoccidioides sppParacoccidioidomicoseReposicionamento de fármacosHomologiaAncoragem molecularParacoccidioidomycosisDrug repositioningHomologyMolecular dockingCIENCIAS BIOLOGICAS::MICROBIOLOGIAReposicionamento in silico de fármacos para tratamento da ParacoccidioidomicoseDrug repositioning in silico for Paracoccidioidomycosis treatmentinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis6085308344741430434600600600600-7769011444564556288-3854583469976220812-2555911436985713659reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.eng.fl_str_mv Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
dc.title.alternative.eng.fl_str_mv Drug repositioning in silico for Paracoccidioidomycosis treatment
title Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
spellingShingle Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
Oliveira, Amanda Alves de
Paracoccidioides spp
Paracoccidioidomicose
Reposicionamento de fármacos
Homologia
Ancoragem molecular
Paracoccidioidomycosis
Drug repositioning
Homology
Molecular docking
CIENCIAS BIOLOGICAS::MICROBIOLOGIA
title_short Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
title_full Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
title_fullStr Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
title_full_unstemmed Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
title_sort Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose
author Oliveira, Amanda Alves de
author_facet Oliveira, Amanda Alves de
author_role author
dc.contributor.advisor1.fl_str_mv Pereira, Maristela
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/1345781867765758
dc.contributor.advisor-co1.fl_str_mv Horta, Carolina Andrade
dc.contributor.advisor-co1Lattes.fl_str_mv http://lattes.cnpq.br/2018317447324228
dc.contributor.referee1.fl_str_mv Pereira, Maristela
dc.contributor.referee2.fl_str_mv Rossi, Nilce Maria Martinez
dc.contributor.referee3.fl_str_mv Mottin, Melina
dc.contributor.referee4.fl_str_mv Amaral, André Correa
dc.contributor.referee5.fl_str_mv Neves, Bruno Junior
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/0037945654773273
dc.contributor.author.fl_str_mv Oliveira, Amanda Alves de
contributor_str_mv Pereira, Maristela
Horta, Carolina Andrade
Pereira, Maristela
Rossi, Nilce Maria Martinez
Mottin, Melina
Amaral, André Correa
Neves, Bruno Junior
dc.subject.por.fl_str_mv Paracoccidioides spp
Paracoccidioidomicose
Reposicionamento de fármacos
Homologia
Ancoragem molecular
topic Paracoccidioides spp
Paracoccidioidomicose
Reposicionamento de fármacos
Homologia
Ancoragem molecular
Paracoccidioidomycosis
Drug repositioning
Homology
Molecular docking
CIENCIAS BIOLOGICAS::MICROBIOLOGIA
dc.subject.eng.fl_str_mv Paracoccidioidomycosis
Drug repositioning
Homology
Molecular docking
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::MICROBIOLOGIA
description Paracoccidioidomycosis (PCM) is a systemic mycosis, caused by thermally dimorphic fungus Paracoccidioides spp., common in Latin America. PCM treatment is long-term chemotherapeutic approach and causes adverse effects. The study goal was drug repositioning with more efficient and safer PCM treatment. It was used data from different lineages of Paracoccidioides spp., Pb01, Pb03 and Pb18. The orthologous proteins were selected from the protein comparison of three isolates, posteriorly, those proteins were compared with proteins of two drugs databases, DrugBank and Therapeutic Target Database (TTD) aiming to identify drugs that had those proteins as target. The Blast P was performed to analyze the percentage of similar character between fungus proteins with drugs banks proteins. Posteriorly, Paracoccidioides spp. proteins were compared with Saccharomyces cerevisiae essential proteins, getting 45 orthologous proteins that were submitted to homology modeling and molecular docking. The results were analyzed, and 17 compounds were selected to be tested in vitro for in silico results confirmation.
publishDate 2018
dc.date.issued.fl_str_mv 2018-03-07
dc.date.accessioned.fl_str_mv 2019-06-27T12:49:30Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv OLIVEIRA, Amanda Alves de. Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose. 2018. 118 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2018.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/9742
dc.identifier.dark.fl_str_mv ark:/38995/0013000002vd7
identifier_str_mv OLIVEIRA, Amanda Alves de. Reposicionamento in silico de fármacos para tratamento da Paracoccidioidomicose. 2018. 118 f. Dissertação (Mestrado em Medicina Tropical e Saúde Publica) - Universidade Federal de Goiás, Goiânia, 2018.
ark:/38995/0013000002vd7
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dc.publisher.none.fl_str_mv Universidade Federal de Goiás
dc.publisher.program.fl_str_mv Programa de Pós-graduação em Medicina Tropical e Saúde Publica (IPTSP)
dc.publisher.initials.fl_str_mv UFG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Instituto de Patologia Tropical e Saúde Pública - IPTSP (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
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