Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum

Detalhes bibliográficos
Autor(a) principal: Cardoso, Aline Assis
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFG
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/3416
Resumo: Research on biological nitrogen fixation (BNF) in common bean had a great progress in recent years, especially in the knowledge of microsimbiont and exploring new approaches seeking greater variability in macrosimbiont for efficiency of BNF. Studies of bacterial diversity and taxonomy, especially applied to common bean symbionts showed a great evolution due to new molecular methodologies for evaluation and characterization. This study aimed to evaluate the tolerance to salinity and temperature, to characterize based on molecular markers and to evaluate the symbiotic efficiency of bacterial isolates obtained from nodules of common bean cultivated on soil samples from the States of Goiás, Minas Gerais and Paraná. The isolates were evaluated for salinity and temperature on YMA medium with different NaCl concentrations (0%, 1%, 2%, 4% and 6%) at different temperatures (28ºC, 33ºC, 38ºC, 43ºC and 48ºC). For molecular characterization based on BOX-PCR and REP-PCR profiles the isolates were grown in liquid YMA for 24 hours and then DNA extraction was performed. Evaluation of symbiotic efficiency of the isolates was conducted under greenhouse conditions in Leonard jars. Seeds of common bean (var. Pérola) were inoculated with different isolates selected in the previous analysis. Nodule number (NN), dry mass of nodules (DMN), specific mass of nodules (SMN), root dry weight (RDW), dry matter of aerial part (DMAP), relation root/shoot (R/S), total nitrogen (N) and leaf area (LA) were evaluated. It was observed that 41.12% of the isolates grew in more restrictive conditions than standard strains SEMIA 4077, SEMIA 4080 and SEMIA 4088, and 29.90% of the isolates grew in less restrictive conditions than SEMIAs strains.BOX-PCR and REP-PCR profiles showed high genetic diversity among the evaluated isolates, demonstrating a high degree of polymorphism. JPrG8A7 and JPrG8A6 isolates exhibited superior performance compared to standard strains when compared the NN , SMN and DMN. The latter showed a positive correlation with the DMAP, Total-N and LA. It was observed that some isolates showed competitive features equal or superior than commercial standards strains, with results that can improve the process of symbiosis between plant and bacteria, thereby generating greater productivity for the common bean cultivation.
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spelling Ferreira, Enderson Petrônio de Britohttp://lattes.cnpq.br/6292879655540619Borba, Tereza Cristina de OliveiraBrasil, Eliana Paula FernandesFerreira, Enderson Petrônio de BritoLeandro, Wilson MozenaDidonet, Cláudia Cristina Garcia Martinhttp://lattes.cnpq.br/4270933743190484Cardoso, Aline Assis2014-10-21T18:17:40Z2014-02-18CARDOSO, Aline Assis. Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum. 2014. 65 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Goiás, Goiânia, 2014.http://repositorio.bc.ufg.br/tede/handle/tede/3416Research on biological nitrogen fixation (BNF) in common bean had a great progress in recent years, especially in the knowledge of microsimbiont and exploring new approaches seeking greater variability in macrosimbiont for efficiency of BNF. Studies of bacterial diversity and taxonomy, especially applied to common bean symbionts showed a great evolution due to new molecular methodologies for evaluation and characterization. This study aimed to evaluate the tolerance to salinity and temperature, to characterize based on molecular markers and to evaluate the symbiotic efficiency of bacterial isolates obtained from nodules of common bean cultivated on soil samples from the States of Goiás, Minas Gerais and Paraná. The isolates were evaluated for salinity and temperature on YMA medium with different NaCl concentrations (0%, 1%, 2%, 4% and 6%) at different temperatures (28ºC, 33ºC, 38ºC, 43ºC and 48ºC). For molecular characterization based on BOX-PCR and REP-PCR profiles the isolates were grown in liquid YMA for 24 hours and then DNA extraction was performed. Evaluation of symbiotic efficiency of the isolates was conducted under greenhouse conditions in Leonard jars. Seeds of common bean (var. Pérola) were inoculated with different isolates selected in the previous analysis. Nodule number (NN), dry mass of nodules (DMN), specific mass of nodules (SMN), root dry weight (RDW), dry matter of aerial part (DMAP), relation root/shoot (R/S), total nitrogen (N) and leaf area (LA) were evaluated. It was observed that 41.12% of the isolates grew in more restrictive conditions than standard strains SEMIA 4077, SEMIA 4080 and SEMIA 4088, and 29.90% of the isolates grew in less restrictive conditions than SEMIAs strains.BOX-PCR and REP-PCR profiles showed high genetic diversity among the evaluated isolates, demonstrating a high degree of polymorphism. JPrG8A7 and JPrG8A6 isolates exhibited superior performance compared to standard strains when compared the NN , SMN and DMN. The latter showed a positive correlation with the DMAP, Total-N and LA. It was observed that some isolates showed competitive features equal or superior than commercial standards strains, with results that can improve the process of symbiosis between plant and bacteria, thereby generating greater productivity for the common bean cultivation.A pesquisa sobre a fixação biológica de nitrogênio (FBN) no feijoeiro teve bastante progresso nos últimos anos, especialmente no conhecimento do microsimbionte e no estudo de novas abordagens buscando maior variabilidade no macrosimbionte para maior eficiência da FBN. Os estudos da diversidade e taxonomia bacteriana, especialmente aplicados aos simbiontes do feijoeiro-comum apresentou uma grande evolução devido às novas metodologias moleculares de avaliação e caracterização. Este trabalho teve como objetivo avaliar a resistência à salinidade e temperatura, caracterizar molecularmente e avaliar a eficiência simbiótica de isolados de nódulos de feijoeiro-comum oriundos dos estados de GO, MG e PR. Os isolados foram avaliadas quanto à salinidade e temperatura em meio YMA com diferentes concentrações de NaCl (0%; 1%; 2%; 4% e 6%) em diferentes temperaturas (28ºC; 33ºC; 38ºC; 43ºC e 48ºC). Para a caracterização molecular os isolados foram crescidos em meio YMA líquido por 24 horas e logo em seguida foi realizada a extração do DNA. Foram avaliados perfis BOX-PCR e REP-PCR. A avaliação da eficiência simbiótica dos isolados foi conduzida em casa-de-vegetação com vasos tipo Leonard com a cultivar Pérola inoculada com diferentes isolados selecionados na análise anterior. Foi avaliado o número de nódulos (NN), massa seca de nódulos (MSN), massa específica de nódulos (MEN), massa seca de raiz (MSR), matéria seca da parte aérea (MSPA), relação raiz/parte aérea (R/PA), nitrogênio total (N) e área foliar (AF). Observou-se que 41,12% dos isolados cresceram em condições mais restritivas que as estirpes padrão SEMIA 4077, SEMIA 4080 e SEMIA 4088, e 29,90% dos isolados cresceram em condições menos restritivas que as SEMIAs. Os perfis BOX-PCR e REP-PCR apresentaram grande diversidade genética entre os isolados avaliados, demonstrando um alto grau de polimorfismo. Os isolados JPrG8A7 e JPrG8A6 apresentaram desempenho superior as estirpes padrão quando comparados o NN, MEN e MSN. Esta última apresentou correlação positiva com a MSPA, N-Total e AF. Foi observado que alguns isolados apresentaram características competitivas iguais ou superiores as estirpes-padrões comerciais, apresentando resultados que podem melhorar o processo de simbiose entre a planta e a bactéria, gerando assim uma maior produtividade para a cultura do feijoeiro-comum.Submitted by Erika Demachki (erikademachki@gmail.com) on 2014-10-21T17:26:17Z No. of bitstreams: 2 Dissertação - Aline Assis Cardoso - 2014.pdf: 1764081 bytes, checksum: e25295d0c53ab008ce92f6d68f628db7 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Approved for entry into archive by Jaqueline Silva (jtas29@gmail.com) on 2014-10-21T18:17:40Z (GMT) No. of bitstreams: 2 Dissertação - Aline Assis Cardoso - 2014.pdf: 1764081 bytes, checksum: e25295d0c53ab008ce92f6d68f628db7 (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Made available in DSpace on 2014-10-21T18:17:40Z (GMT). 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dc.title.por.fl_str_mv Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
dc.title.alternative.eng.fl_str_mv Polyphasic characterization of bacterial isolates obtained from common bean nodules
title Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
spellingShingle Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
Cardoso, Aline Assis
Rhizobium
Nodulação
BOX-PCR
REP-PCR
Diversidade
Nodulation
Diversity
AGRONOMIA::CIENCIA DO SOLO
title_short Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
title_full Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
title_fullStr Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
title_full_unstemmed Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
title_sort Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum
author Cardoso, Aline Assis
author_facet Cardoso, Aline Assis
author_role author
dc.contributor.advisor1.fl_str_mv Ferreira, Enderson Petrônio de Brito
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/6292879655540619
dc.contributor.advisor-co1.fl_str_mv Borba, Tereza Cristina de Oliveira
dc.contributor.advisor-co2.fl_str_mv Brasil, Eliana Paula Fernandes
dc.contributor.referee1.fl_str_mv Ferreira, Enderson Petrônio de Brito
dc.contributor.referee2.fl_str_mv Leandro, Wilson Mozena
dc.contributor.referee3.fl_str_mv Didonet, Cláudia Cristina Garcia Martin
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/4270933743190484
dc.contributor.author.fl_str_mv Cardoso, Aline Assis
contributor_str_mv Ferreira, Enderson Petrônio de Brito
Borba, Tereza Cristina de Oliveira
Brasil, Eliana Paula Fernandes
Ferreira, Enderson Petrônio de Brito
Leandro, Wilson Mozena
Didonet, Cláudia Cristina Garcia Martin
dc.subject.por.fl_str_mv Rhizobium
Nodulação
BOX-PCR
REP-PCR
Diversidade
topic Rhizobium
Nodulação
BOX-PCR
REP-PCR
Diversidade
Nodulation
Diversity
AGRONOMIA::CIENCIA DO SOLO
dc.subject.eng.fl_str_mv Nodulation
Diversity
dc.subject.cnpq.fl_str_mv AGRONOMIA::CIENCIA DO SOLO
description Research on biological nitrogen fixation (BNF) in common bean had a great progress in recent years, especially in the knowledge of microsimbiont and exploring new approaches seeking greater variability in macrosimbiont for efficiency of BNF. Studies of bacterial diversity and taxonomy, especially applied to common bean symbionts showed a great evolution due to new molecular methodologies for evaluation and characterization. This study aimed to evaluate the tolerance to salinity and temperature, to characterize based on molecular markers and to evaluate the symbiotic efficiency of bacterial isolates obtained from nodules of common bean cultivated on soil samples from the States of Goiás, Minas Gerais and Paraná. The isolates were evaluated for salinity and temperature on YMA medium with different NaCl concentrations (0%, 1%, 2%, 4% and 6%) at different temperatures (28ºC, 33ºC, 38ºC, 43ºC and 48ºC). For molecular characterization based on BOX-PCR and REP-PCR profiles the isolates were grown in liquid YMA for 24 hours and then DNA extraction was performed. Evaluation of symbiotic efficiency of the isolates was conducted under greenhouse conditions in Leonard jars. Seeds of common bean (var. Pérola) were inoculated with different isolates selected in the previous analysis. Nodule number (NN), dry mass of nodules (DMN), specific mass of nodules (SMN), root dry weight (RDW), dry matter of aerial part (DMAP), relation root/shoot (R/S), total nitrogen (N) and leaf area (LA) were evaluated. It was observed that 41.12% of the isolates grew in more restrictive conditions than standard strains SEMIA 4077, SEMIA 4080 and SEMIA 4088, and 29.90% of the isolates grew in less restrictive conditions than SEMIAs strains.BOX-PCR and REP-PCR profiles showed high genetic diversity among the evaluated isolates, demonstrating a high degree of polymorphism. JPrG8A7 and JPrG8A6 isolates exhibited superior performance compared to standard strains when compared the NN , SMN and DMN. The latter showed a positive correlation with the DMAP, Total-N and LA. It was observed that some isolates showed competitive features equal or superior than commercial standards strains, with results that can improve the process of symbiosis between plant and bacteria, thereby generating greater productivity for the common bean cultivation.
publishDate 2014
dc.date.accessioned.fl_str_mv 2014-10-21T18:17:40Z
dc.date.issued.fl_str_mv 2014-02-18
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv CARDOSO, Aline Assis. Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum. 2014. 65 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Goiás, Goiânia, 2014.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/3416
identifier_str_mv CARDOSO, Aline Assis. Caracterização polifásica de isolados bacterianos obtidos de nódulos de feijoeiro-comum. 2014. 65 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Goiás, Goiânia, 2014.
url http://repositorio.bc.ufg.br/tede/handle/tede/3416
dc.language.iso.fl_str_mv por
language por
dc.relation.program.fl_str_mv 842119561133988381
dc.relation.confidence.fl_str_mv 600
600
600
600
dc.relation.department.fl_str_mv 4500684695727928426
dc.relation.cnpq.fl_str_mv -5919840527232375671
dc.relation.sponsorship.fl_str_mv 2075167498588264571
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
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rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Universidade Federal de Goiás
dc.publisher.program.fl_str_mv Programa de Pós-graduação em Agronomia (EAEA)
dc.publisher.initials.fl_str_mv UFG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Escola de Agronomia e Engenharia de Alimentos - EAEA (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFG
instname:Universidade Federal de Goiás (UFG)
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instname_str Universidade Federal de Goiás (UFG)
instacron_str UFG
institution UFG
reponame_str Repositório Institucional da UFG
collection Repositório Institucional da UFG
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