Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFG |
Texto Completo: | http://repositorio.bc.ufg.br/tede/handle/tede/5496 |
Resumo: | The Gram-positive bacterium Staphylococcus saprophyticus, one of the coagulasenegative staphylococci, is the second most common causative agent of urinary tract infection, affecting mainly sexually active women. Staphylococcus saprophyticus can cause acute diseases as pyelonephritis, sepsis, nephrolithiasis, endocarditis, urethritis, epididymitis and prostatitis. This work aims to identify Staphylococcus saprophyticus surface proteins by using a proteolytic shaving approach, a methodology that was established to identify surface-exposed protein domains by tripsinization of intact cells. The peptides obtained were treated by trypsin, reduced, alkylated and identified by nano-chromatography using a nanoACQUITY UPLCTM system (Waters) coupled to a SYNAPT Q-TOF mass spectrometer (Waters). The homology analysis was performed using the software ProteinLynx 2.3 (Waters). Through the shaving, it was possible to identify 219 proteins, many of them, described as virulence factors. Of total, 01 is cell wall protein, 09 are extracelular proteins, 19 are membrane proteins and 190 are citoplasmatic proteins. Besides of the lysis process, the presence of cytoplasmic proteins on cell surface can be due to the activity of export pathways not yet identified and many of these proteins can be proteins with moonlighting function, in other words, proteins that plays more of one function, it can, in this case, plays functions on S. saprophyticus cell surface related to bacterial virulence. The main proteins with moonlighting function include metabolic enzymes of the glycolytic pathway; enzymes of other metabolic pathways, such as, glyoxalate cycle; chaperones and proteins related with the proteic folding. The prediction of cellular localization was performed through LocateP database. The results of this research help to elucidate the strategies and machineries used by proteins during the adhesion, infection and proliferation, leading us to understand the interaction between the pathogenic bacteria S. saprophyticus and the human host. The knowledge about the proteins present on the cell surface is of extreme importance, because many of these proteins represent targets to new drugs, therapeutic antibodies or vaccines, since the pathogen cell surface is the first to contact with the host cells during the infection process. |
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Rocha, Juliana Alves Parentehttp://lattes.cnpq.br/7089231795367245Rocha, Juliana Alves ParenteCoelho, Alexandre Siqueira GuedesBaeza, Lilian Cristianehttp://lattes.cnpq.br/8290981685355876Carvalho, Alex Jesus de2016-04-20T12:58:33Z2014-06-09CARVALHO, A. J. Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência. 2014. 66 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2014.http://repositorio.bc.ufg.br/tede/handle/tede/5496The Gram-positive bacterium Staphylococcus saprophyticus, one of the coagulasenegative staphylococci, is the second most common causative agent of urinary tract infection, affecting mainly sexually active women. Staphylococcus saprophyticus can cause acute diseases as pyelonephritis, sepsis, nephrolithiasis, endocarditis, urethritis, epididymitis and prostatitis. This work aims to identify Staphylococcus saprophyticus surface proteins by using a proteolytic shaving approach, a methodology that was established to identify surface-exposed protein domains by tripsinization of intact cells. The peptides obtained were treated by trypsin, reduced, alkylated and identified by nano-chromatography using a nanoACQUITY UPLCTM system (Waters) coupled to a SYNAPT Q-TOF mass spectrometer (Waters). The homology analysis was performed using the software ProteinLynx 2.3 (Waters). Through the shaving, it was possible to identify 219 proteins, many of them, described as virulence factors. Of total, 01 is cell wall protein, 09 are extracelular proteins, 19 are membrane proteins and 190 are citoplasmatic proteins. Besides of the lysis process, the presence of cytoplasmic proteins on cell surface can be due to the activity of export pathways not yet identified and many of these proteins can be proteins with moonlighting function, in other words, proteins that plays more of one function, it can, in this case, plays functions on S. saprophyticus cell surface related to bacterial virulence. The main proteins with moonlighting function include metabolic enzymes of the glycolytic pathway; enzymes of other metabolic pathways, such as, glyoxalate cycle; chaperones and proteins related with the proteic folding. The prediction of cellular localization was performed through LocateP database. The results of this research help to elucidate the strategies and machineries used by proteins during the adhesion, infection and proliferation, leading us to understand the interaction between the pathogenic bacteria S. saprophyticus and the human host. The knowledge about the proteins present on the cell surface is of extreme importance, because many of these proteins represent targets to new drugs, therapeutic antibodies or vaccines, since the pathogen cell surface is the first to contact with the host cells during the infection process.A bactéria Gram-positiva Staphylococcus saprophyticus, uma das bactérias estafilococos coagulase negativa, é o segundo agente mais comum causador de infecções do trato urinário, afetando principalmente mulheres sexualmente ativas. S. saprophyticus pode causar doenças agudas como pielonefrite, sepse, nefrolitíase, endocardite, uretrite, epididimite e prostatite. Este trabalho teve como objetivo identificar proteínas de superfície de S. saprophyticus pela abordagem de shaving proteolítico, uma metodologia que foi estabelecida para identificar proteínas que possuem domínios proteicos na superfície celular utilizando a tripsinização de células intactas. Posteriormente, os peptídeos obtidos foram tripsinizados, reduzidos, alquilados e identificados através de nano-cromatografia utilizando um sistema nanoACQUITY UPLCTM (Waters) acoplado a um espectrômetro de massas SYNAPT Q-TOF (Waters). Com isso foi possível identificar 219 proteínas, muitas delas descritas como fatores de virulência. Do total, 01 proteína é de parede celular, 09 extracelulares, 19 de membrana e 190 citoplasmáticas. Além do processo de lise, a presença de proteínas citoplasmáticas na superfície celular pode ser devida à atividade de vias de exportação ainda não identificadas e muitas dessas proteínas podem ser proteínas com função moonlighting, ou seja, proteínas que desempenham mais de uma função, podendo, neste caso, desempenhar funções na superfície de S. saprophyticus relacionadas à virulência bacteriana. As principais proteínas com função moonlighting incluem enzimas metabólicas da via glicolítica; enzimas de outras vias metabólicas, tais como, ciclo do glioxalato; chaperonas e proteínas relacionadas com o dobramento proteico. A predição de localização celular foi realizada com o banco de dados LocateP. Os resultados desta pesquisa contribuíram na elucidação das estratégias e maquinarias utilizadas pelas proteínas durante a adesão, infecção e proliferação, levando-nos a compreender a interação entre a bactéria patogênica S. saprophyticus e o hospedeiro humano. O conhecimento acerca das proteínas presentes na superfície celular é de extrema importância, visto que muitas dessas proteínas representam alvos para novas drogas, anticorpos terapêuticos ou vacinas, uma vez que a superfície celular do patógeno é a primeira a entrar em contato com as células do hospedeiro durante o processo de infecção.Submitted by Luciana Ferreira (lucgeral@gmail.com) on 2016-04-20T12:49:28Z No. of bitstreams: 2 Dissertação - Alex Jesus de Carvalho - 2014.pdf: 1685689 bytes, checksum: 5b4f38809e4a3fe6252bba20b25d949b (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2016-04-20T12:58:32Z (GMT) No. of bitstreams: 2 Dissertação - Alex Jesus de Carvalho - 2014.pdf: 1685689 bytes, checksum: 5b4f38809e4a3fe6252bba20b25d949b (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5)Made available in DSpace on 2016-04-20T12:58:33Z (GMT). No. of bitstreams: 2 Dissertação - Alex Jesus de Carvalho - 2014.pdf: 1685689 bytes, checksum: 5b4f38809e4a3fe6252bba20b25d949b (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) Previous issue date: 2014-06-09Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESapplication/pdfporUniversidade Federal de GoiásPrograma de Pós-graduação em Genetica e Biologia MolecularUFGBrasilInstituto de Ciências Biológicas - ICB (RG)http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessStaphylococcus saprophyticusProteínas de superfície celularShavingFatores de virulênciaImunogenicidadeStaphylococcus saprophyticusCell surface proteinsShavingVirulence factorsImmunogenicityCIENCIAS BIOLOGICASIdentificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulênciaIdentification of surface proteins of Staphylococcus saprophyticus and analysis of virulence factorsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-7235106986317239737600600600600-3872772117827373404-34391788430682021612075167498588264571reponame:Repositório Institucional da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; 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dc.title.por.fl_str_mv |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
dc.title.alternative.eng.fl_str_mv |
Identification of surface proteins of Staphylococcus saprophyticus and analysis of virulence factors |
title |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
spellingShingle |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência Carvalho, Alex Jesus de Staphylococcus saprophyticus Proteínas de superfície celular Shaving Fatores de virulência Imunogenicidade Staphylococcus saprophyticus Cell surface proteins Shaving Virulence factors Immunogenicity CIENCIAS BIOLOGICAS |
title_short |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
title_full |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
title_fullStr |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
title_full_unstemmed |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
title_sort |
Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência |
author |
Carvalho, Alex Jesus de |
author_facet |
Carvalho, Alex Jesus de |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Rocha, Juliana Alves Parente |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/7089231795367245 |
dc.contributor.referee1.fl_str_mv |
Rocha, Juliana Alves Parente |
dc.contributor.referee2.fl_str_mv |
Coelho, Alexandre Siqueira Guedes |
dc.contributor.referee3.fl_str_mv |
Baeza, Lilian Cristiane |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/8290981685355876 |
dc.contributor.author.fl_str_mv |
Carvalho, Alex Jesus de |
contributor_str_mv |
Rocha, Juliana Alves Parente Rocha, Juliana Alves Parente Coelho, Alexandre Siqueira Guedes Baeza, Lilian Cristiane |
dc.subject.por.fl_str_mv |
Staphylococcus saprophyticus Proteínas de superfície celular Shaving Fatores de virulência Imunogenicidade |
topic |
Staphylococcus saprophyticus Proteínas de superfície celular Shaving Fatores de virulência Imunogenicidade Staphylococcus saprophyticus Cell surface proteins Shaving Virulence factors Immunogenicity CIENCIAS BIOLOGICAS |
dc.subject.eng.fl_str_mv |
Staphylococcus saprophyticus Cell surface proteins Shaving Virulence factors Immunogenicity |
dc.subject.cnpq.fl_str_mv |
CIENCIAS BIOLOGICAS |
description |
The Gram-positive bacterium Staphylococcus saprophyticus, one of the coagulasenegative staphylococci, is the second most common causative agent of urinary tract infection, affecting mainly sexually active women. Staphylococcus saprophyticus can cause acute diseases as pyelonephritis, sepsis, nephrolithiasis, endocarditis, urethritis, epididymitis and prostatitis. This work aims to identify Staphylococcus saprophyticus surface proteins by using a proteolytic shaving approach, a methodology that was established to identify surface-exposed protein domains by tripsinization of intact cells. The peptides obtained were treated by trypsin, reduced, alkylated and identified by nano-chromatography using a nanoACQUITY UPLCTM system (Waters) coupled to a SYNAPT Q-TOF mass spectrometer (Waters). The homology analysis was performed using the software ProteinLynx 2.3 (Waters). Through the shaving, it was possible to identify 219 proteins, many of them, described as virulence factors. Of total, 01 is cell wall protein, 09 are extracelular proteins, 19 are membrane proteins and 190 are citoplasmatic proteins. Besides of the lysis process, the presence of cytoplasmic proteins on cell surface can be due to the activity of export pathways not yet identified and many of these proteins can be proteins with moonlighting function, in other words, proteins that plays more of one function, it can, in this case, plays functions on S. saprophyticus cell surface related to bacterial virulence. The main proteins with moonlighting function include metabolic enzymes of the glycolytic pathway; enzymes of other metabolic pathways, such as, glyoxalate cycle; chaperones and proteins related with the proteic folding. The prediction of cellular localization was performed through LocateP database. The results of this research help to elucidate the strategies and machineries used by proteins during the adhesion, infection and proliferation, leading us to understand the interaction between the pathogenic bacteria S. saprophyticus and the human host. The knowledge about the proteins present on the cell surface is of extreme importance, because many of these proteins represent targets to new drugs, therapeutic antibodies or vaccines, since the pathogen cell surface is the first to contact with the host cells during the infection process. |
publishDate |
2014 |
dc.date.issued.fl_str_mv |
2014-06-09 |
dc.date.accessioned.fl_str_mv |
2016-04-20T12:58:33Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
CARVALHO, A. J. Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência. 2014. 66 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2014. |
dc.identifier.uri.fl_str_mv |
http://repositorio.bc.ufg.br/tede/handle/tede/5496 |
identifier_str_mv |
CARVALHO, A. J. Identificação de proteínas de superfície de Staphylococcus saprophyticus e análise de fatores de virulência. 2014. 66 f. Dissertação (Mestrado em Genética e Biologia Molecular) - Universidade Federal de Goiás, Goiânia, 2014. |
url |
http://repositorio.bc.ufg.br/tede/handle/tede/5496 |
dc.language.iso.fl_str_mv |
por |
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por |
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600 600 600 600 |
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dc.relation.cnpq.fl_str_mv |
-3439178843068202161 |
dc.relation.sponsorship.fl_str_mv |
2075167498588264571 |
dc.rights.driver.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
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http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
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Universidade Federal de Goiás |
dc.publisher.program.fl_str_mv |
Programa de Pós-graduação em Genetica e Biologia Molecular |
dc.publisher.initials.fl_str_mv |
UFG |
dc.publisher.country.fl_str_mv |
Brasil |
dc.publisher.department.fl_str_mv |
Instituto de Ciências Biológicas - ICB (RG) |
publisher.none.fl_str_mv |
Universidade Federal de Goiás |
dc.source.none.fl_str_mv |
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MD5 MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFG - Universidade Federal de Goiás (UFG) |
repository.mail.fl_str_mv |
tasesdissertacoes.bc@ufg.br |
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