COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae

Detalhes bibliográficos
Autor(a) principal: Chiu, Ching-An
Data de Publicação: 2020
Outros Autores: Lin, Cheng-Tao
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Cerne (Online)
Texto Completo: https://cerne.ufla.br/site/index.php/CERNE/article/view/2220
Resumo: Selecting predictors for species distribution models (SDMs) is a major challenge. In this study, we evaluated a comprehensive set of 62 environmental predictors that may be related to the occurrence of Fagus hayatae. We modeled F. hayatae as a case study to compare model performance through different environmental predictor subsets according to three selection procedures, namely correlation coefficients between predictors, contribution level of predictors, and expert choice of biologically relevant predictors. The three selection procedures provided satisfactory results with high performance using about 10 valid predictors but had their respective limitations. Consequently, we suggest an approach of predictor selection. Accordingly, the first step was identifying and eliminating ineffective variables with nonidentifiability, such as coldness index, by using bivariate scatterplots. Next, correlation coefficients between other candidate predictors were calculated. Finally, predictors were selected within lower correlated (|r| < 0.7) candidate subsets on the basis of high contribution level predictors and expert knowledge of biologically relevant predictors for target species.
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spelling COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayataeCollinearity, Effective warmth index, Expert knowledge, Environmental variable, TaiwanPREDICTOR SELECTION FOR SPECIES DISTRIBUTION MODELING OF Fagus hayataeSelecting predictors for species distribution models (SDMs) is a major challenge. In this study, we evaluated a comprehensive set of 62 environmental predictors that may be related to the occurrence of Fagus hayatae. We modeled F. hayatae as a case study to compare model performance through different environmental predictor subsets according to three selection procedures, namely correlation coefficients between predictors, contribution level of predictors, and expert choice of biologically relevant predictors. The three selection procedures provided satisfactory results with high performance using about 10 valid predictors but had their respective limitations. Consequently, we suggest an approach of predictor selection. Accordingly, the first step was identifying and eliminating ineffective variables with nonidentifiability, such as coldness index, by using bivariate scatterplots. Next, correlation coefficients between other candidate predictors were calculated. Finally, predictors were selected within lower correlated (|r| < 0.7) candidate subsets on the basis of high contribution level predictors and expert knowledge of biologically relevant predictors for target species.CERNECERNE2020-08-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://cerne.ufla.br/site/index.php/CERNE/article/view/2220CERNE; Vol 26 No 2 (2020); 172-182CERNE; Vol 26 No 2 (2020); 172-1822317-63420104-7760reponame:Cerne (Online)instname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttps://cerne.ufla.br/site/index.php/CERNE/article/view/2220/1184Copyright (c) 2020 CERNEinfo:eu-repo/semantics/openAccessChiu, Ching-AnLin, Cheng-Tao2020-08-19T01:34:14Zoai:cerne.ufla.br:article/2220Revistahttps://cerne.ufla.br/site/index.php/CERNEPUBhttps://cerne.ufla.br/site/index.php/CERNE/oaicerne@dcf.ufla.br||cerne@dcf.ufla.br2317-63420104-7760opendoar:2024-05-21T19:54:42.432945Cerne (Online) - Universidade Federal de Lavras (UFLA)true
dc.title.none.fl_str_mv COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
title COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
spellingShingle COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
Chiu, Ching-An
Collinearity, Effective warmth index, Expert knowledge, Environmental variable, Taiwan
PREDICTOR SELECTION FOR SPECIES DISTRIBUTION MODELING OF Fagus hayatae
title_short COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
title_full COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
title_fullStr COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
title_full_unstemmed COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
title_sort COMPARISON OF PREDICTOR SELECTION PROCEDURES IN SPECIES DISTRIBUTION MODELING: A CASE STUDY OF Fagus hayatae
author Chiu, Ching-An
author_facet Chiu, Ching-An
Lin, Cheng-Tao
author_role author
author2 Lin, Cheng-Tao
author2_role author
dc.contributor.author.fl_str_mv Chiu, Ching-An
Lin, Cheng-Tao
dc.subject.por.fl_str_mv Collinearity, Effective warmth index, Expert knowledge, Environmental variable, Taiwan
PREDICTOR SELECTION FOR SPECIES DISTRIBUTION MODELING OF Fagus hayatae
topic Collinearity, Effective warmth index, Expert knowledge, Environmental variable, Taiwan
PREDICTOR SELECTION FOR SPECIES DISTRIBUTION MODELING OF Fagus hayatae
description Selecting predictors for species distribution models (SDMs) is a major challenge. In this study, we evaluated a comprehensive set of 62 environmental predictors that may be related to the occurrence of Fagus hayatae. We modeled F. hayatae as a case study to compare model performance through different environmental predictor subsets according to three selection procedures, namely correlation coefficients between predictors, contribution level of predictors, and expert choice of biologically relevant predictors. The three selection procedures provided satisfactory results with high performance using about 10 valid predictors but had their respective limitations. Consequently, we suggest an approach of predictor selection. Accordingly, the first step was identifying and eliminating ineffective variables with nonidentifiability, such as coldness index, by using bivariate scatterplots. Next, correlation coefficients between other candidate predictors were calculated. Finally, predictors were selected within lower correlated (|r| < 0.7) candidate subsets on the basis of high contribution level predictors and expert knowledge of biologically relevant predictors for target species.
publishDate 2020
dc.date.none.fl_str_mv 2020-08-11
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://cerne.ufla.br/site/index.php/CERNE/article/view/2220
url https://cerne.ufla.br/site/index.php/CERNE/article/view/2220
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://cerne.ufla.br/site/index.php/CERNE/article/view/2220/1184
dc.rights.driver.fl_str_mv Copyright (c) 2020 CERNE
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2020 CERNE
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv CERNE
CERNE
publisher.none.fl_str_mv CERNE
CERNE
dc.source.none.fl_str_mv CERNE; Vol 26 No 2 (2020); 172-182
CERNE; Vol 26 No 2 (2020); 172-182
2317-6342
0104-7760
reponame:Cerne (Online)
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Cerne (Online)
collection Cerne (Online)
repository.name.fl_str_mv Cerne (Online) - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv cerne@dcf.ufla.br||cerne@dcf.ufla.br
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