White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFLA |
Texto Completo: | http://repositorio.ufla.br/jspui/handle/1/30429 |
Resumo: | We aimed to identify simple sequence repeat (SSR) markers linked to quantitative trait loci (QTLs) associated with white mold resistance in a segregating population derived from a cross between common bean cultivars Jalo and Small White, in the Southern State of Minas Gerais. Parents were crossed to obtain the F2 generation of 190 plants. From these, F2:3 and F2:4 progenies were obtained for phenotypic evaluation. DNA was extracted from F2 plants and parents for genotyping with SSR primers. For phenotypic assessment by the straw test, we used 190 F2:3 progenies and six lines in a triple-lattice design of 14 x 14 m. Nine trials were conducted for phenotyping by the oxalic acid method to evaluate 177 F2:4 progenies, in addition to the two parents and two common treatments represented by the Jalo and Corujinha lines. The experimental design for the oxalic acid method was completely randomized with three replicates. Adjusted means of evaluations related to F2:3 and F2:4 were used to identify QTLs by using the moving away method from the marker under Bayesian analysis. The markers GATS91, BM197, and X60000 stood out with high heritability and with effects on disease reduction by the straw test; therefore, these markers are promising for selection. The markers BM183, BM189, and SSR-IAC143 were associated with the QTLs identified by oxalic acid, providing greater effects in white mold resistance with high heritability. Based on the oxalic acid and straw test methods, the most prominent marker was PVBR189. |
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White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean populationPhaseolus vulgarisSclerotinia sclerotiorumBayesian analysisOxalic acidStraw testWe aimed to identify simple sequence repeat (SSR) markers linked to quantitative trait loci (QTLs) associated with white mold resistance in a segregating population derived from a cross between common bean cultivars Jalo and Small White, in the Southern State of Minas Gerais. Parents were crossed to obtain the F2 generation of 190 plants. From these, F2:3 and F2:4 progenies were obtained for phenotypic evaluation. DNA was extracted from F2 plants and parents for genotyping with SSR primers. For phenotypic assessment by the straw test, we used 190 F2:3 progenies and six lines in a triple-lattice design of 14 x 14 m. Nine trials were conducted for phenotyping by the oxalic acid method to evaluate 177 F2:4 progenies, in addition to the two parents and two common treatments represented by the Jalo and Corujinha lines. The experimental design for the oxalic acid method was completely randomized with three replicates. Adjusted means of evaluations related to F2:3 and F2:4 were used to identify QTLs by using the moving away method from the marker under Bayesian analysis. The markers GATS91, BM197, and X60000 stood out with high heritability and with effects on disease reduction by the straw test; therefore, these markers are promising for selection. The markers BM183, BM189, and SSR-IAC143 were associated with the QTLs identified by oxalic acid, providing greater effects in white mold resistance with high heritability. Based on the oxalic acid and straw test methods, the most prominent marker was PVBR189.Fundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP)2018-09-14T19:02:09Z2018-09-14T19:02:09Z2018-08-26info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfSOUZA, D.A. White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, p. 1-15, Aug. 2016.http://repositorio.ufla.br/jspui/handle/1/30429Genetics and Molecular Research (GMR)reponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAAttribution-ShareAlike 4.0 Internationalhttp://creativecommons.org/licenses/by-sa/4.0/info:eu-repo/semantics/openAccessSouza, D. A.Balestre, M.Pamplona, A. K.Leite, M. E.Dias, J. A.Santos, J. B.eng2019-12-16T13:56:40Zoai:localhost:1/30429Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2019-12-16T13:56:40Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false |
dc.title.none.fl_str_mv |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
title |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
spellingShingle |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population Souza, D. A. Phaseolus vulgaris Sclerotinia sclerotiorum Bayesian analysis Oxalic acid Straw test |
title_short |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
title_full |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
title_fullStr |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
title_full_unstemmed |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
title_sort |
White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population |
author |
Souza, D. A. |
author_facet |
Souza, D. A. Balestre, M. Pamplona, A. K. Leite, M. E. Dias, J. A. Santos, J. B. |
author_role |
author |
author2 |
Balestre, M. Pamplona, A. K. Leite, M. E. Dias, J. A. Santos, J. B. |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Souza, D. A. Balestre, M. Pamplona, A. K. Leite, M. E. Dias, J. A. Santos, J. B. |
dc.subject.por.fl_str_mv |
Phaseolus vulgaris Sclerotinia sclerotiorum Bayesian analysis Oxalic acid Straw test |
topic |
Phaseolus vulgaris Sclerotinia sclerotiorum Bayesian analysis Oxalic acid Straw test |
description |
We aimed to identify simple sequence repeat (SSR) markers linked to quantitative trait loci (QTLs) associated with white mold resistance in a segregating population derived from a cross between common bean cultivars Jalo and Small White, in the Southern State of Minas Gerais. Parents were crossed to obtain the F2 generation of 190 plants. From these, F2:3 and F2:4 progenies were obtained for phenotypic evaluation. DNA was extracted from F2 plants and parents for genotyping with SSR primers. For phenotypic assessment by the straw test, we used 190 F2:3 progenies and six lines in a triple-lattice design of 14 x 14 m. Nine trials were conducted for phenotyping by the oxalic acid method to evaluate 177 F2:4 progenies, in addition to the two parents and two common treatments represented by the Jalo and Corujinha lines. The experimental design for the oxalic acid method was completely randomized with three replicates. Adjusted means of evaluations related to F2:3 and F2:4 were used to identify QTLs by using the moving away method from the marker under Bayesian analysis. The markers GATS91, BM197, and X60000 stood out with high heritability and with effects on disease reduction by the straw test; therefore, these markers are promising for selection. The markers BM183, BM189, and SSR-IAC143 were associated with the QTLs identified by oxalic acid, providing greater effects in white mold resistance with high heritability. Based on the oxalic acid and straw test methods, the most prominent marker was PVBR189. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-09-14T19:02:09Z 2018-09-14T19:02:09Z 2018-08-26 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
SOUZA, D.A. White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, p. 1-15, Aug. 2016. http://repositorio.ufla.br/jspui/handle/1/30429 |
identifier_str_mv |
SOUZA, D.A. White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, p. 1-15, Aug. 2016. |
url |
http://repositorio.ufla.br/jspui/handle/1/30429 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
Attribution-ShareAlike 4.0 International http://creativecommons.org/licenses/by-sa/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-ShareAlike 4.0 International http://creativecommons.org/licenses/by-sa/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Fundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP) |
publisher.none.fl_str_mv |
Fundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP) |
dc.source.none.fl_str_mv |
Genetics and Molecular Research (GMR) reponame:Repositório Institucional da UFLA instname:Universidade Federal de Lavras (UFLA) instacron:UFLA |
instname_str |
Universidade Federal de Lavras (UFLA) |
instacron_str |
UFLA |
institution |
UFLA |
reponame_str |
Repositório Institucional da UFLA |
collection |
Repositório Institucional da UFLA |
repository.name.fl_str_mv |
Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA) |
repository.mail.fl_str_mv |
nivaldo@ufla.br || repositorio.biblioteca@ufla.br |
_version_ |
1815439295279792128 |