White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population

Detalhes bibliográficos
Autor(a) principal: Souza, D. A.
Data de Publicação: 2018
Outros Autores: Balestre, M., Pamplona, A. K., Leite, M. E., Dias, J. A., Santos, J. B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/30429
Resumo: We aimed to identify simple sequence repeat (SSR) markers linked to quantitative trait loci (QTLs) associated with white mold resistance in a segregating population derived from a cross between common bean cultivars Jalo and Small White, in the Southern State of Minas Gerais. Parents were crossed to obtain the F2 generation of 190 plants. From these, F2:3 and F2:4 progenies were obtained for phenotypic evaluation. DNA was extracted from F2 plants and parents for genotyping with SSR primers. For phenotypic assessment by the straw test, we used 190 F2:3 progenies and six lines in a triple-lattice design of 14 x 14 m. Nine trials were conducted for phenotyping by the oxalic acid method to evaluate 177 F2:4 progenies, in addition to the two parents and two common treatments represented by the Jalo and Corujinha lines. The experimental design for the oxalic acid method was completely randomized with three replicates. Adjusted means of evaluations related to F2:3 and F2:4 were used to identify QTLs by using the moving away method from the marker under Bayesian analysis. The markers GATS91, BM197, and X60000 stood out with high heritability and with effects on disease reduction by the straw test; therefore, these markers are promising for selection. The markers BM183, BM189, and SSR-IAC143 were associated with the QTLs identified by oxalic acid, providing greater effects in white mold resistance with high heritability. Based on the oxalic acid and straw test methods, the most prominent marker was PVBR189.
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spelling White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean populationPhaseolus vulgarisSclerotinia sclerotiorumBayesian analysisOxalic acidStraw testWe aimed to identify simple sequence repeat (SSR) markers linked to quantitative trait loci (QTLs) associated with white mold resistance in a segregating population derived from a cross between common bean cultivars Jalo and Small White, in the Southern State of Minas Gerais. Parents were crossed to obtain the F2 generation of 190 plants. From these, F2:3 and F2:4 progenies were obtained for phenotypic evaluation. DNA was extracted from F2 plants and parents for genotyping with SSR primers. For phenotypic assessment by the straw test, we used 190 F2:3 progenies and six lines in a triple-lattice design of 14 x 14 m. Nine trials were conducted for phenotyping by the oxalic acid method to evaluate 177 F2:4 progenies, in addition to the two parents and two common treatments represented by the Jalo and Corujinha lines. The experimental design for the oxalic acid method was completely randomized with three replicates. Adjusted means of evaluations related to F2:3 and F2:4 were used to identify QTLs by using the moving away method from the marker under Bayesian analysis. The markers GATS91, BM197, and X60000 stood out with high heritability and with effects on disease reduction by the straw test; therefore, these markers are promising for selection. The markers BM183, BM189, and SSR-IAC143 were associated with the QTLs identified by oxalic acid, providing greater effects in white mold resistance with high heritability. Based on the oxalic acid and straw test methods, the most prominent marker was PVBR189.Fundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP)2018-09-14T19:02:09Z2018-09-14T19:02:09Z2018-08-26info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfSOUZA, D.A. White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, p. 1-15, Aug. 2016.http://repositorio.ufla.br/jspui/handle/1/30429Genetics and Molecular Research (GMR)reponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAAttribution-ShareAlike 4.0 Internationalhttp://creativecommons.org/licenses/by-sa/4.0/info:eu-repo/semantics/openAccessSouza, D. A.Balestre, M.Pamplona, A. K.Leite, M. E.Dias, J. A.Santos, J. B.eng2019-12-16T13:56:40Zoai:localhost:1/30429Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2019-12-16T13:56:40Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
title White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
spellingShingle White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
Souza, D. A.
Phaseolus vulgaris
Sclerotinia sclerotiorum
Bayesian analysis
Oxalic acid
Straw test
title_short White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
title_full White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
title_fullStr White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
title_full_unstemmed White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
title_sort White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population
author Souza, D. A.
author_facet Souza, D. A.
Balestre, M.
Pamplona, A. K.
Leite, M. E.
Dias, J. A.
Santos, J. B.
author_role author
author2 Balestre, M.
Pamplona, A. K.
Leite, M. E.
Dias, J. A.
Santos, J. B.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Souza, D. A.
Balestre, M.
Pamplona, A. K.
Leite, M. E.
Dias, J. A.
Santos, J. B.
dc.subject.por.fl_str_mv Phaseolus vulgaris
Sclerotinia sclerotiorum
Bayesian analysis
Oxalic acid
Straw test
topic Phaseolus vulgaris
Sclerotinia sclerotiorum
Bayesian analysis
Oxalic acid
Straw test
description We aimed to identify simple sequence repeat (SSR) markers linked to quantitative trait loci (QTLs) associated with white mold resistance in a segregating population derived from a cross between common bean cultivars Jalo and Small White, in the Southern State of Minas Gerais. Parents were crossed to obtain the F2 generation of 190 plants. From these, F2:3 and F2:4 progenies were obtained for phenotypic evaluation. DNA was extracted from F2 plants and parents for genotyping with SSR primers. For phenotypic assessment by the straw test, we used 190 F2:3 progenies and six lines in a triple-lattice design of 14 x 14 m. Nine trials were conducted for phenotyping by the oxalic acid method to evaluate 177 F2:4 progenies, in addition to the two parents and two common treatments represented by the Jalo and Corujinha lines. The experimental design for the oxalic acid method was completely randomized with three replicates. Adjusted means of evaluations related to F2:3 and F2:4 were used to identify QTLs by using the moving away method from the marker under Bayesian analysis. The markers GATS91, BM197, and X60000 stood out with high heritability and with effects on disease reduction by the straw test; therefore, these markers are promising for selection. The markers BM183, BM189, and SSR-IAC143 were associated with the QTLs identified by oxalic acid, providing greater effects in white mold resistance with high heritability. Based on the oxalic acid and straw test methods, the most prominent marker was PVBR189.
publishDate 2018
dc.date.none.fl_str_mv 2018-09-14T19:02:09Z
2018-09-14T19:02:09Z
2018-08-26
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv SOUZA, D.A. White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, p. 1-15, Aug. 2016.
http://repositorio.ufla.br/jspui/handle/1/30429
identifier_str_mv SOUZA, D.A. White mold resistance-associated quantitative trait loci in the Jalo x Small White common bean population. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, p. 1-15, Aug. 2016.
url http://repositorio.ufla.br/jspui/handle/1/30429
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv Attribution-ShareAlike 4.0 International
http://creativecommons.org/licenses/by-sa/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-ShareAlike 4.0 International
http://creativecommons.org/licenses/by-sa/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Fundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP)
publisher.none.fl_str_mv Fundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP)
dc.source.none.fl_str_mv Genetics and Molecular Research (GMR)
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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