Use of molecular markers SSR and SCAR for identification of olive accessions

Detalhes bibliográficos
Autor(a) principal: Val, Aurinete Daienn Borges do
Data de Publicação: 2020
Outros Autores: Breves, Sâmera de Souza, Cançado, Geraldo Magela de Almeida, Ferreira, Juliano Lino, Pasqual, Moacir
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/43237
Resumo: Morphological and agronomical describers are traditionally used in plant characterization. However, the usage of these describers have some limitations such as susceptibility to abiotic and biotic stress and environmental factors. Furthermore, the describers are not stable over time and many can only be evaluated during the adult phase of the plants, which requires time and physical space. Molecular markers offer numerous advantages compared to the conventional alternatives based on phenotype: they are stable and detectable in all vegetable tissues, and are independent of the environment and development phase. One of the main advantages of the use of molecular markers is the time reduction in the identification of genetic diversity among the studied subjects, as the genotypes may even be described for the seed or seedling phase. Many countries have already adopted molecular markers to identify olive cultivars more accurately. The aim of this study was to evaluate the genetic identity of eight olive accessions supposedly belonging to cultivar Arbequina by using microsatellite (SSR) and Sequence Characterized Amplified Region (SCAR) markers. One accession corresponding to the cultivar was also incorporated into the analysis as a reference genotype. The molecular marker data were analyzed on the software GENALEX6.The markers generated an accumulated PI and PE of 1.26 x 10-6 and 0.949, respectively.The results supported the hypothesis that all accessions belong to the cultivar Arbequina, and the markers can therefore be applied to other varieties of olive species.
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spelling Use of molecular markers SSR and SCAR for identification of olive accessionsUso dos marcadores moleculares SSR e SCAR para identificação de acessos de oliveiraOlea europaeaArbequinaDNA fingerprintingHomonymySynonymyMorphological and agronomical describers are traditionally used in plant characterization. However, the usage of these describers have some limitations such as susceptibility to abiotic and biotic stress and environmental factors. Furthermore, the describers are not stable over time and many can only be evaluated during the adult phase of the plants, which requires time and physical space. Molecular markers offer numerous advantages compared to the conventional alternatives based on phenotype: they are stable and detectable in all vegetable tissues, and are independent of the environment and development phase. One of the main advantages of the use of molecular markers is the time reduction in the identification of genetic diversity among the studied subjects, as the genotypes may even be described for the seed or seedling phase. Many countries have already adopted molecular markers to identify olive cultivars more accurately. The aim of this study was to evaluate the genetic identity of eight olive accessions supposedly belonging to cultivar Arbequina by using microsatellite (SSR) and Sequence Characterized Amplified Region (SCAR) markers. One accession corresponding to the cultivar was also incorporated into the analysis as a reference genotype. The molecular marker data were analyzed on the software GENALEX6.The markers generated an accumulated PI and PE of 1.26 x 10-6 and 0.949, respectively.The results supported the hypothesis that all accessions belong to the cultivar Arbequina, and the markers can therefore be applied to other varieties of olive species.Universidade Federal de Uberlândia2020-09-29T18:59:51Z2020-09-29T18:59:51Z2020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfVAL, A. D.A B. do et al. Use of molecular markers SSR and SCAR for identification of olive accessions. Bioscience Journal, Uberlândia, v. 36, n. 4, p. 1137-1145, July/Aug. 2020.http://repositorio.ufla.br/jspui/handle/1/43237Bioscience Journalreponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAAttribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessVal, Aurinete Daienn Borges doBreves, Sâmera de SouzaCançado, Geraldo Magela de AlmeidaFerreira, Juliano LinoPasqual, Moacireng2023-05-26T18:52:43Zoai:localhost:1/43237Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2023-05-26T18:52:43Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Use of molecular markers SSR and SCAR for identification of olive accessions
Uso dos marcadores moleculares SSR e SCAR para identificação de acessos de oliveira
title Use of molecular markers SSR and SCAR for identification of olive accessions
spellingShingle Use of molecular markers SSR and SCAR for identification of olive accessions
Val, Aurinete Daienn Borges do
Olea europaea
Arbequina
DNA fingerprinting
Homonymy
Synonymy
title_short Use of molecular markers SSR and SCAR for identification of olive accessions
title_full Use of molecular markers SSR and SCAR for identification of olive accessions
title_fullStr Use of molecular markers SSR and SCAR for identification of olive accessions
title_full_unstemmed Use of molecular markers SSR and SCAR for identification of olive accessions
title_sort Use of molecular markers SSR and SCAR for identification of olive accessions
author Val, Aurinete Daienn Borges do
author_facet Val, Aurinete Daienn Borges do
Breves, Sâmera de Souza
Cançado, Geraldo Magela de Almeida
Ferreira, Juliano Lino
Pasqual, Moacir
author_role author
author2 Breves, Sâmera de Souza
Cançado, Geraldo Magela de Almeida
Ferreira, Juliano Lino
Pasqual, Moacir
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Val, Aurinete Daienn Borges do
Breves, Sâmera de Souza
Cançado, Geraldo Magela de Almeida
Ferreira, Juliano Lino
Pasqual, Moacir
dc.subject.por.fl_str_mv Olea europaea
Arbequina
DNA fingerprinting
Homonymy
Synonymy
topic Olea europaea
Arbequina
DNA fingerprinting
Homonymy
Synonymy
description Morphological and agronomical describers are traditionally used in plant characterization. However, the usage of these describers have some limitations such as susceptibility to abiotic and biotic stress and environmental factors. Furthermore, the describers are not stable over time and many can only be evaluated during the adult phase of the plants, which requires time and physical space. Molecular markers offer numerous advantages compared to the conventional alternatives based on phenotype: they are stable and detectable in all vegetable tissues, and are independent of the environment and development phase. One of the main advantages of the use of molecular markers is the time reduction in the identification of genetic diversity among the studied subjects, as the genotypes may even be described for the seed or seedling phase. Many countries have already adopted molecular markers to identify olive cultivars more accurately. The aim of this study was to evaluate the genetic identity of eight olive accessions supposedly belonging to cultivar Arbequina by using microsatellite (SSR) and Sequence Characterized Amplified Region (SCAR) markers. One accession corresponding to the cultivar was also incorporated into the analysis as a reference genotype. The molecular marker data were analyzed on the software GENALEX6.The markers generated an accumulated PI and PE of 1.26 x 10-6 and 0.949, respectively.The results supported the hypothesis that all accessions belong to the cultivar Arbequina, and the markers can therefore be applied to other varieties of olive species.
publishDate 2020
dc.date.none.fl_str_mv 2020-09-29T18:59:51Z
2020-09-29T18:59:51Z
2020
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv VAL, A. D.A B. do et al. Use of molecular markers SSR and SCAR for identification of olive accessions. Bioscience Journal, Uberlândia, v. 36, n. 4, p. 1137-1145, July/Aug. 2020.
http://repositorio.ufla.br/jspui/handle/1/43237
identifier_str_mv VAL, A. D.A B. do et al. Use of molecular markers SSR and SCAR for identification of olive accessions. Bioscience Journal, Uberlândia, v. 36, n. 4, p. 1137-1145, July/Aug. 2020.
url http://repositorio.ufla.br/jspui/handle/1/43237
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Uberlândia
publisher.none.fl_str_mv Universidade Federal de Uberlândia
dc.source.none.fl_str_mv Bioscience Journal
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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