Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso

Detalhes bibliográficos
Autor(a) principal: Silveira, Marcelo Marques da
Data de Publicação: 2012
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFMT
Texto Completo: http://ri.ufmt.br/handle/1/1441
Resumo: The conidiobolomycosis is a granulomatous disease associated by the fungus Conidiobolus spp. observed in humans and animals. The traditional techniques for the diagnosis of the disease are isolation of the agent associated with epidemiological aspects and the presence of typical clinical signs and pathological conditions. This work describe the development of Conidiobolus lamprauges specific PCR in order to detect the presence of fungus in clinical samples. Samples of tissue suspected of animals were collected and sent to fungal culture, histopathologic testing and PCR amplification. PCR reactions were performed using DNA extracted from fresh and paraffin embedded tissues with universal primers for fungi and amplifying fragment of the 18S region. rDNA region and specific primers were designed based on the same gene for C. lamprauges, which generated products with approximately 540 bp and 222 bp, respectively. The culture was positive in 26.6% of clinical samples. PCR tests for C. lamprauges showed DNA amplification in fresh tissue (80%) and paraffin (44.4%). Environmental samples were also collected in a property where there was an outbreak of disease, in order to carry out the study to detect possible sources of infection for sheep. During twelve months, plant and water samples were collected, their DNA extracted and analysed by to qPCR. In the analysis of environmental samples, six were positive for C. lamprauges in plant and three in water samples. The standard curve was generated resulting in a detection limit of 1 fg of DNA from C. lamprauges (3.4 x 102 molecules), ε = 0.98, R2= 0.98 and slope = -3.3. The results showed that there was no relationship between the presence of the fungus in plant material with the rainy season observed in the study. In conclusion, the PCR technique described here shows a high sensitivity and specificity for detection of C. lamprauges in clinical samples of fresh and paraffin, becoming a tool to a rapid, and the seasonality disease may not be closely related to the presence of the agent in the environment, for C. lamprauges was observed in different seasons, but were quantified at different levels during the period of study.
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spelling Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato GrossoConidiobolomicosePCRqPCR18S rDNACNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIAConidiobolomycosisPCRqPCR18S rDNAThe conidiobolomycosis is a granulomatous disease associated by the fungus Conidiobolus spp. observed in humans and animals. The traditional techniques for the diagnosis of the disease are isolation of the agent associated with epidemiological aspects and the presence of typical clinical signs and pathological conditions. This work describe the development of Conidiobolus lamprauges specific PCR in order to detect the presence of fungus in clinical samples. Samples of tissue suspected of animals were collected and sent to fungal culture, histopathologic testing and PCR amplification. PCR reactions were performed using DNA extracted from fresh and paraffin embedded tissues with universal primers for fungi and amplifying fragment of the 18S region. rDNA region and specific primers were designed based on the same gene for C. lamprauges, which generated products with approximately 540 bp and 222 bp, respectively. The culture was positive in 26.6% of clinical samples. PCR tests for C. lamprauges showed DNA amplification in fresh tissue (80%) and paraffin (44.4%). Environmental samples were also collected in a property where there was an outbreak of disease, in order to carry out the study to detect possible sources of infection for sheep. During twelve months, plant and water samples were collected, their DNA extracted and analysed by to qPCR. In the analysis of environmental samples, six were positive for C. lamprauges in plant and three in water samples. The standard curve was generated resulting in a detection limit of 1 fg of DNA from C. lamprauges (3.4 x 102 molecules), ε = 0.98, R2= 0.98 and slope = -3.3. The results showed that there was no relationship between the presence of the fungus in plant material with the rainy season observed in the study. In conclusion, the PCR technique described here shows a high sensitivity and specificity for detection of C. lamprauges in clinical samples of fresh and paraffin, becoming a tool to a rapid, and the seasonality disease may not be closely related to the presence of the agent in the environment, for C. lamprauges was observed in different seasons, but were quantified at different levels during the period of study.FAPEMATA conidiobolomicose é uma doença granulomatosa associada ao fungo Conidiobolus spp observada em humanos e animais. As técnicas tradicionais para o diagnóstico da doença são o isolamento do agente associado a aspectos epidemiológicos e a presença de sinais clínicos típicos e as condições patológicas. Esse trabalho descreve o desenvolvimento de PCR específico para Conidiobolus lamprauges a fim de detectar a presença do fungo em amostras clínicas. Foi realizada cultura fúngica a partir de amostras de tecidos frescos de ovinos suspeitos da doença (15), e testes histopatológicos e PCR. Amostras de tecidos parafinados (18) também foram submetidas aos testes histopatológicos e à tecnica de PCR. Foram realizadas reações de PCR a partir do DNA dos tecidos frescos e parafinados com primers universais para fungos, amplificando fragmento da região 18S rDNA e primers específicos foram desenhados com base no mesmo gene para C. lamprauges, que gerou produtos de aproximadamente 540 pb e 222 pb respectivamente. A cultura foi positiva em 26,6% das amostras clínicas. A técnica de PCR para C. lamprauges mostrou amplificação de DNA nos tecidos frescos (80%), e parafinados (44,4%). Amostras de pasto e água foram coletadas mensalmente em uma propriedade onde ocorreu surto da doença, a fim de realizar o estudo para detecção de prováveis fontes de infecção para os ovinos. Foram coletadas 12 de amostras de vegetal e água, extraido o DNA e submetidas ao qPCR. Nas analises das amostras ambientais, dos doze meses de coleta, seis mostraram-se positivos para C. lamprauges em vegetal, e três nas amostras de água. A curva-padrão foi gerada resultando em limite de detecção de 1 fg de DNA de C. lamprauges (3,4 x 102 moléculas), ε = 0.98, R2 = 0.98 e slope= -3.3. Os resultados evidenciaram que não houve relação da presença do fungo em material vegetal com o período chuvoso observado no estudo. Em conclusão, a técnica de PCR descrita aqui demonstra elevada sensibilidade e especificidade para a detecção de C. lamprauges em amostras clínicas de tecido fresco e parafinado, tornando-se uma ferramenta para um diagnóstico rápido, e que a sazonalidade da doença pode não estar estreitamente relacionada com a presença do agente no ambiente, pois C. lamprauges foi observado em diferentes épocas do ano, no entanto foram quantificados em diferentes níveis durante o periodo do estudo.Universidade Federal de Mato GrossoBrasilFaculdade de Agronomia, Medicina Veterinária e Zootecnia (FAMEVZ)UFMT CUC - CuiabáPrograma de Pós-Graduação em Ciências VeterináriasNakazato, LucianoColodel, Edson Moletahttp://lattes.cnpq.br/6150957874684255http://lattes.cnpq.br/3898850578198054Nakazato, Luciano638.389.071-91http://lattes.cnpq.br/3898850578198054Pescador, Caroline Argenta958.659.180-87http://lattes.cnpq.br/5754349416478829638.389.071-91766.442.439-91Botton, Sônia de Avila672.074.720-72http://lattes.cnpq.br/0814772095155945Silveira, Marcelo Marques da2019-09-16T09:56:03Z2012-05-032019-09-16T09:56:03Z2012-03-06info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisSILVEIRA, Marcelo Marques da. Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso. 2012. 73 f. Dissertação (Mestrado em Ciências Veterinárias) - Universidade Federal de Mato Grosso, Faculdade de Agronomia, Medicina Veterinária e Zootecnia, Cuiabá, 2012http://ri.ufmt.br/handle/1/1441porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFMTinstname:Universidade Federal de Mato Grosso (UFMT)instacron:UFMT2019-09-21T07:01:54Zoai:localhost:1/1441Repositório InstitucionalPUBhttp://ri.ufmt.br/oai/requestjordanbiblio@gmail.comopendoar:2019-09-21T07:01:54Repositório Institucional da UFMT - Universidade Federal de Mato Grosso (UFMT)false
dc.title.none.fl_str_mv Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
title Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
spellingShingle Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
Silveira, Marcelo Marques da
Conidiobolomicose
PCR
qPCR
18S rDNA
CNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIA
Conidiobolomycosis
PCR
qPCR
18S rDNA
title_short Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
title_full Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
title_fullStr Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
title_full_unstemmed Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
title_sort Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso
author Silveira, Marcelo Marques da
author_facet Silveira, Marcelo Marques da
author_role author
dc.contributor.none.fl_str_mv Nakazato, Luciano
Colodel, Edson Moleta
http://lattes.cnpq.br/6150957874684255
http://lattes.cnpq.br/3898850578198054
Nakazato, Luciano
638.389.071-91
http://lattes.cnpq.br/3898850578198054
Pescador, Caroline Argenta
958.659.180-87
http://lattes.cnpq.br/5754349416478829
638.389.071-91
766.442.439-91
Botton, Sônia de Avila
672.074.720-72
http://lattes.cnpq.br/0814772095155945
dc.contributor.author.fl_str_mv Silveira, Marcelo Marques da
dc.subject.por.fl_str_mv Conidiobolomicose
PCR
qPCR
18S rDNA
CNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIA
Conidiobolomycosis
PCR
qPCR
18S rDNA
topic Conidiobolomicose
PCR
qPCR
18S rDNA
CNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIA
Conidiobolomycosis
PCR
qPCR
18S rDNA
description The conidiobolomycosis is a granulomatous disease associated by the fungus Conidiobolus spp. observed in humans and animals. The traditional techniques for the diagnosis of the disease are isolation of the agent associated with epidemiological aspects and the presence of typical clinical signs and pathological conditions. This work describe the development of Conidiobolus lamprauges specific PCR in order to detect the presence of fungus in clinical samples. Samples of tissue suspected of animals were collected and sent to fungal culture, histopathologic testing and PCR amplification. PCR reactions were performed using DNA extracted from fresh and paraffin embedded tissues with universal primers for fungi and amplifying fragment of the 18S region. rDNA region and specific primers were designed based on the same gene for C. lamprauges, which generated products with approximately 540 bp and 222 bp, respectively. The culture was positive in 26.6% of clinical samples. PCR tests for C. lamprauges showed DNA amplification in fresh tissue (80%) and paraffin (44.4%). Environmental samples were also collected in a property where there was an outbreak of disease, in order to carry out the study to detect possible sources of infection for sheep. During twelve months, plant and water samples were collected, their DNA extracted and analysed by to qPCR. In the analysis of environmental samples, six were positive for C. lamprauges in plant and three in water samples. The standard curve was generated resulting in a detection limit of 1 fg of DNA from C. lamprauges (3.4 x 102 molecules), ε = 0.98, R2= 0.98 and slope = -3.3. The results showed that there was no relationship between the presence of the fungus in plant material with the rainy season observed in the study. In conclusion, the PCR technique described here shows a high sensitivity and specificity for detection of C. lamprauges in clinical samples of fresh and paraffin, becoming a tool to a rapid, and the seasonality disease may not be closely related to the presence of the agent in the environment, for C. lamprauges was observed in different seasons, but were quantified at different levels during the period of study.
publishDate 2012
dc.date.none.fl_str_mv 2012-05-03
2012-03-06
2019-09-16T09:56:03Z
2019-09-16T09:56:03Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv SILVEIRA, Marcelo Marques da. Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso. 2012. 73 f. Dissertação (Mestrado em Ciências Veterinárias) - Universidade Federal de Mato Grosso, Faculdade de Agronomia, Medicina Veterinária e Zootecnia, Cuiabá, 2012
http://ri.ufmt.br/handle/1/1441
identifier_str_mv SILVEIRA, Marcelo Marques da. Desenvolvimento de reação em cadeia da polimerase e ecoepidemiologia de Conidiobolus lamprauges em ovinos de Alto Paraguai, Mato Grosso. 2012. 73 f. Dissertação (Mestrado em Ciências Veterinárias) - Universidade Federal de Mato Grosso, Faculdade de Agronomia, Medicina Veterinária e Zootecnia, Cuiabá, 2012
url http://ri.ufmt.br/handle/1/1441
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade Federal de Mato Grosso
Brasil
Faculdade de Agronomia, Medicina Veterinária e Zootecnia (FAMEVZ)
UFMT CUC - Cuiabá
Programa de Pós-Graduação em Ciências Veterinárias
publisher.none.fl_str_mv Universidade Federal de Mato Grosso
Brasil
Faculdade de Agronomia, Medicina Veterinária e Zootecnia (FAMEVZ)
UFMT CUC - Cuiabá
Programa de Pós-Graduação em Ciências Veterinárias
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFMT
instname:Universidade Federal de Mato Grosso (UFMT)
instacron:UFMT
instname_str Universidade Federal de Mato Grosso (UFMT)
instacron_str UFMT
institution UFMT
reponame_str Repositório Institucional da UFMT
collection Repositório Institucional da UFMT
repository.name.fl_str_mv Repositório Institucional da UFMT - Universidade Federal de Mato Grosso (UFMT)
repository.mail.fl_str_mv jordanbiblio@gmail.com
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