Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.

Detalhes bibliográficos
Autor(a) principal: Moreira, Leandro Marcio
Data de Publicação: 2010
Outros Autores: Almeida Junior, Nalvo Franco de, Potnis, Neha, Digiampietri, Luciano Antonio, Adi, Said Sadique, Bortolossi, Julio Cesar, Silva, Ana Claudia Rasera da, Silva, Aline Maria da, Moraes, Fabrício Edgar de, Oliveira, Julio Cezar Franco de, Souza, Robson Francisco de, Facincani, Agda Paula, Ferraz, André Luiz Julien, Ferro, Maria Inês Tiraboschi, Furlan, Luiz Roberto, Gimenez, Daniele Fernanda Jovino, Jones, Jeffrey B., Kitajima, Elliot Watanabe, Laia, Marcelo Luiz de, Leite Junior, Rui Pereira, Nishyama, Milton Yutaka, Rodrigues Neto, Julio, Dezem, Leticia Ane Sizuki Nociti, Norman, David J., Ostroski, Eric Hainer, Pereira Junior, Haroldo Alves, Staskawicz, Brian J., Tezza, Renata Izabel, Ferro, Jesus Aparecido, Vinatzer, Boris A., Setubal, João Carlos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFOP
Texto Completo: http://www.repositorio.ufop.br/handle/123456789/4529
https://doi.org/10.1186/1471-2164-11-238
Resumo: Background: Citrus canker is a disease that has severe economic impact on the citrus industry worldwide. There are three types of canker, called A, B, and C. The three types have different phenotypes and affect different citrus species. The causative agent for type A is Xanthomonas citri subsp. citri, whose genome sequence was made available in 2002. Xanthomonas fuscans subsp. aurantifolii strain B causes canker B and Xanthomonas fuscans subsp. aurantifolii strain C causes canker C. Results: We have sequenced the genomes of strains B and C to draft status. We have compared their genomic content to X. citri subsp. citri and to other Xanthomonas genomes, with special emphasis on type III secreted effector repertoires. In addition to pthA, already known to be present in all three citrus canker strains, two additional effector genes, xopE3 and xopAI, are also present in all three strains and are both located on the same putative genomic island. These two effector genes, along with one other effector-like gene in the same region, are thus good candidates for being pathogenicity factors on citrus. Numerous gene content differences also exist between the three cankers strains, which can be correlated with their different virulence and host range. Particular attention was placed on the analysis of genes involved in biofilm formation and quorum sensing, type IV secretion, flagellum synthesis and motility, lipopolysacharide synthesis, and on the gene xacPNP, which codes for a natriuretic protein. Conclusion: We have uncovered numerous commonalities and differences in gene content between the genomes of the pathogenic agents causing citrus canker A, B, and C and other Xanthomonas genomes. Molecular genetics can now be employed to determine the role of these genes in plant-microbe interactions. The gained knowledge will be instrumental for improving citrus canker control.
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spelling Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.Background: Citrus canker is a disease that has severe economic impact on the citrus industry worldwide. There are three types of canker, called A, B, and C. The three types have different phenotypes and affect different citrus species. The causative agent for type A is Xanthomonas citri subsp. citri, whose genome sequence was made available in 2002. Xanthomonas fuscans subsp. aurantifolii strain B causes canker B and Xanthomonas fuscans subsp. aurantifolii strain C causes canker C. Results: We have sequenced the genomes of strains B and C to draft status. We have compared their genomic content to X. citri subsp. citri and to other Xanthomonas genomes, with special emphasis on type III secreted effector repertoires. In addition to pthA, already known to be present in all three citrus canker strains, two additional effector genes, xopE3 and xopAI, are also present in all three strains and are both located on the same putative genomic island. These two effector genes, along with one other effector-like gene in the same region, are thus good candidates for being pathogenicity factors on citrus. Numerous gene content differences also exist between the three cankers strains, which can be correlated with their different virulence and host range. Particular attention was placed on the analysis of genes involved in biofilm formation and quorum sensing, type IV secretion, flagellum synthesis and motility, lipopolysacharide synthesis, and on the gene xacPNP, which codes for a natriuretic protein. Conclusion: We have uncovered numerous commonalities and differences in gene content between the genomes of the pathogenic agents causing citrus canker A, B, and C and other Xanthomonas genomes. Molecular genetics can now be employed to determine the role of these genes in plant-microbe interactions. The gained knowledge will be instrumental for improving citrus canker control.2015-03-03T16:47:26Z2015-03-03T16:47:26Z2010info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfMOREIRA, L. M. et al. Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii. BMC Genomics, v. 11, p. 238, 2010. Disponível em: <http://www.biomedcentral.com/1471-2164/11/238>. Acesso em: 08 nov. 2014.1471-2164http://www.repositorio.ufop.br/handle/123456789/4529https://doi.org/10.1186/1471-2164-11-238Authors of articles published in BMC Genomics are the copyright holders of their article and have granted to any third party, in advance and in perpetuity, the right to use, reproduce or disseminate their article, according to the BioMed Central license agreement. Fonte: BMC Genomics <http://bmcgenomics.biomedcentral.com/about>. Acesso em: 17 out. 2016.info:eu-repo/semantics/openAccessMoreira, Leandro MarcioAlmeida Junior, Nalvo Franco dePotnis, NehaDigiampietri, Luciano AntonioAdi, Said SadiqueBortolossi, Julio CesarSilva, Ana Claudia Rasera daSilva, Aline Maria daMoraes, Fabrício Edgar deOliveira, Julio Cezar Franco deSouza, Robson Francisco deFacincani, Agda PaulaFerraz, André Luiz JulienFerro, Maria Inês TiraboschiFurlan, Luiz RobertoGimenez, Daniele Fernanda JovinoJones, Jeffrey B.Kitajima, Elliot WatanabeLaia, Marcelo Luiz deLeite Junior, Rui PereiraNishyama, Milton YutakaRodrigues Neto, JulioDezem, Leticia Ane Sizuki NocitiNorman, David J.Ostroski, Eric HainerPereira Junior, Haroldo AlvesStaskawicz, Brian J.Tezza, Renata IzabelFerro, Jesus AparecidoVinatzer, Boris A.Setubal, João Carlosengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOP2024-02-06T20:59:44Zoai:repositorio.ufop.br:123456789/4529Repositório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332024-02-06T20:59:44Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false
dc.title.none.fl_str_mv Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
title Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
spellingShingle Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
Moreira, Leandro Marcio
title_short Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
title_full Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
title_fullStr Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
title_full_unstemmed Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
title_sort Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.
author Moreira, Leandro Marcio
author_facet Moreira, Leandro Marcio
Almeida Junior, Nalvo Franco de
Potnis, Neha
Digiampietri, Luciano Antonio
Adi, Said Sadique
Bortolossi, Julio Cesar
Silva, Ana Claudia Rasera da
Silva, Aline Maria da
Moraes, Fabrício Edgar de
Oliveira, Julio Cezar Franco de
Souza, Robson Francisco de
Facincani, Agda Paula
Ferraz, André Luiz Julien
Ferro, Maria Inês Tiraboschi
Furlan, Luiz Roberto
Gimenez, Daniele Fernanda Jovino
Jones, Jeffrey B.
Kitajima, Elliot Watanabe
Laia, Marcelo Luiz de
Leite Junior, Rui Pereira
Nishyama, Milton Yutaka
Rodrigues Neto, Julio
Dezem, Leticia Ane Sizuki Nociti
Norman, David J.
Ostroski, Eric Hainer
Pereira Junior, Haroldo Alves
Staskawicz, Brian J.
Tezza, Renata Izabel
Ferro, Jesus Aparecido
Vinatzer, Boris A.
Setubal, João Carlos
author_role author
author2 Almeida Junior, Nalvo Franco de
Potnis, Neha
Digiampietri, Luciano Antonio
Adi, Said Sadique
Bortolossi, Julio Cesar
Silva, Ana Claudia Rasera da
Silva, Aline Maria da
Moraes, Fabrício Edgar de
Oliveira, Julio Cezar Franco de
Souza, Robson Francisco de
Facincani, Agda Paula
Ferraz, André Luiz Julien
Ferro, Maria Inês Tiraboschi
Furlan, Luiz Roberto
Gimenez, Daniele Fernanda Jovino
Jones, Jeffrey B.
Kitajima, Elliot Watanabe
Laia, Marcelo Luiz de
Leite Junior, Rui Pereira
Nishyama, Milton Yutaka
Rodrigues Neto, Julio
Dezem, Leticia Ane Sizuki Nociti
Norman, David J.
Ostroski, Eric Hainer
Pereira Junior, Haroldo Alves
Staskawicz, Brian J.
Tezza, Renata Izabel
Ferro, Jesus Aparecido
Vinatzer, Boris A.
Setubal, João Carlos
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Moreira, Leandro Marcio
Almeida Junior, Nalvo Franco de
Potnis, Neha
Digiampietri, Luciano Antonio
Adi, Said Sadique
Bortolossi, Julio Cesar
Silva, Ana Claudia Rasera da
Silva, Aline Maria da
Moraes, Fabrício Edgar de
Oliveira, Julio Cezar Franco de
Souza, Robson Francisco de
Facincani, Agda Paula
Ferraz, André Luiz Julien
Ferro, Maria Inês Tiraboschi
Furlan, Luiz Roberto
Gimenez, Daniele Fernanda Jovino
Jones, Jeffrey B.
Kitajima, Elliot Watanabe
Laia, Marcelo Luiz de
Leite Junior, Rui Pereira
Nishyama, Milton Yutaka
Rodrigues Neto, Julio
Dezem, Leticia Ane Sizuki Nociti
Norman, David J.
Ostroski, Eric Hainer
Pereira Junior, Haroldo Alves
Staskawicz, Brian J.
Tezza, Renata Izabel
Ferro, Jesus Aparecido
Vinatzer, Boris A.
Setubal, João Carlos
description Background: Citrus canker is a disease that has severe economic impact on the citrus industry worldwide. There are three types of canker, called A, B, and C. The three types have different phenotypes and affect different citrus species. The causative agent for type A is Xanthomonas citri subsp. citri, whose genome sequence was made available in 2002. Xanthomonas fuscans subsp. aurantifolii strain B causes canker B and Xanthomonas fuscans subsp. aurantifolii strain C causes canker C. Results: We have sequenced the genomes of strains B and C to draft status. We have compared their genomic content to X. citri subsp. citri and to other Xanthomonas genomes, with special emphasis on type III secreted effector repertoires. In addition to pthA, already known to be present in all three citrus canker strains, two additional effector genes, xopE3 and xopAI, are also present in all three strains and are both located on the same putative genomic island. These two effector genes, along with one other effector-like gene in the same region, are thus good candidates for being pathogenicity factors on citrus. Numerous gene content differences also exist between the three cankers strains, which can be correlated with their different virulence and host range. Particular attention was placed on the analysis of genes involved in biofilm formation and quorum sensing, type IV secretion, flagellum synthesis and motility, lipopolysacharide synthesis, and on the gene xacPNP, which codes for a natriuretic protein. Conclusion: We have uncovered numerous commonalities and differences in gene content between the genomes of the pathogenic agents causing citrus canker A, B, and C and other Xanthomonas genomes. Molecular genetics can now be employed to determine the role of these genes in plant-microbe interactions. The gained knowledge will be instrumental for improving citrus canker control.
publishDate 2010
dc.date.none.fl_str_mv 2010
2015-03-03T16:47:26Z
2015-03-03T16:47:26Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv MOREIRA, L. M. et al. Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii. BMC Genomics, v. 11, p. 238, 2010. Disponível em: <http://www.biomedcentral.com/1471-2164/11/238>. Acesso em: 08 nov. 2014.
1471-2164
http://www.repositorio.ufop.br/handle/123456789/4529
https://doi.org/10.1186/1471-2164-11-238
identifier_str_mv MOREIRA, L. M. et al. Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii. BMC Genomics, v. 11, p. 238, 2010. Disponível em: <http://www.biomedcentral.com/1471-2164/11/238>. Acesso em: 08 nov. 2014.
1471-2164
url http://www.repositorio.ufop.br/handle/123456789/4529
https://doi.org/10.1186/1471-2164-11-238
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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instname:Universidade Federal de Ouro Preto (UFOP)
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