A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.

Detalhes bibliográficos
Autor(a) principal: Duarte, Anderson Ribeiro
Data de Publicação: 2017
Outros Autores: Silva, Spencer Barbosa da, Oliveira, Fernando Luiz Pereira de, Ribeiro, Marcelo Carlos, Cançado, André Luiz Fernandes, Moura, Flávio dos Reis
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFOP
Texto Completo: http://www.repositorio.ufop.br/handle/123456789/9794
Resumo: Methods for the detection and inference of irregularly shaped geographic clusters with count data are important tools in disease surveillance and epidemiology. Recently, several methods were developed which combine Kulldorff’s Spatial Scan Statistic with some penalty function to control the excessive freedom of shape of spatial clusters. Different penalty functions were conceived based on the cluster geometric shape or on the adjacency structure and non-connectivity of the cluster associated graph. Those penalty function were also implemented using the framework of multi-objective optimization methods. In particular, the non-connectivity penalty was shown to be very effective in cluster detection. Basically, the non-connectivity penalty function relies on the adjacency structure of the cluster’s associated graph but it does not take into account the population distribution within the cluster. Here we introduce a modification of the non-connectivity penalty function, introducing weights in the components of the penalty function according to the cluster population distribution. Our methods is able to identify multiple clusters in the study area. We show through numerical simulations that our weighted non-connectivity penalty function outperforms the original non-connectivity function in terms of power of detection, sensitivity and positive predictive value, also being computationally fast. Both single-objective and multi-objective versions of the algorithm are implemented and compared.
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spelling Duarte, Anderson RibeiroSilva, Spencer Barbosa daOliveira, Fernando Luiz Pereira deRibeiro, Marcelo CarlosCançado, André Luiz FernandesMoura, Flávio dos Reis2018-04-02T14:24:37Z2018-04-02T14:24:37Z2017DUARTE, A. R. et al. A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters. Revista Brasileira de Biometria, v. 35, p. 160-173, n. 2017. Disponível em: <http://www.biometria.ufla.br/index.php/BBJ/article/view/124>. Acesso em: 16 jan. 2018.19830823http://www.repositorio.ufop.br/handle/123456789/9794Methods for the detection and inference of irregularly shaped geographic clusters with count data are important tools in disease surveillance and epidemiology. Recently, several methods were developed which combine Kulldorff’s Spatial Scan Statistic with some penalty function to control the excessive freedom of shape of spatial clusters. Different penalty functions were conceived based on the cluster geometric shape or on the adjacency structure and non-connectivity of the cluster associated graph. Those penalty function were also implemented using the framework of multi-objective optimization methods. In particular, the non-connectivity penalty was shown to be very effective in cluster detection. Basically, the non-connectivity penalty function relies on the adjacency structure of the cluster’s associated graph but it does not take into account the population distribution within the cluster. Here we introduce a modification of the non-connectivity penalty function, introducing weights in the components of the penalty function according to the cluster population distribution. Our methods is able to identify multiple clusters in the study area. We show through numerical simulations that our weighted non-connectivity penalty function outperforms the original non-connectivity function in terms of power of detection, sensitivity and positive predictive value, also being computationally fast. Both single-objective and multi-objective versions of the algorithm are implemented and compared.All content of Revista Brasileira de Biometria - UFLA, except where noted, is licensed under a Creative Commons 4.0 International. The journal uses for licensing the transfer of rights Creative commons attribution 3.0 to open access journals Open Archives Iniciative - OAI -, categoria green road. Fonte: Revista Brasileira de Biometria - UFLA <http://www.biometria.ufla.br/index.php/BBJ/about>. Acesso em: 10 jan. 2018.info:eu-repo/semantics/openAccessSpatial scan statisticIrregular clustersMulti-objective algorithmsCompactness FunctionA weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOPLICENSElicense.txtlicense.txttext/plain; charset=utf-8924http://www.repositorio.ufop.br/bitstream/123456789/9794/2/license.txt62604f8d955274beb56c80ce1ee5dcaeMD52ORIGINALARTIGO_WeightedNonConnectivity.pdfARTIGO_WeightedNonConnectivity.pdfapplication/pdf291984http://www.repositorio.ufop.br/bitstream/123456789/9794/1/ARTIGO_WeightedNonConnectivity.pdfc7632934f222c3e22ea1622ecf04aa4cMD51123456789/97942018-04-02 10:24:37.607oai:localhost:123456789/9794RGVjbGFyYcOnw6NvIGRlIGRpc3RyaWJ1acOnw6NvIG7Do28tZXhjbHVzaXZhCgpPIHJlZmVyaWRvIGF1dG9yOgoKYSlEZWNsYXJhIHF1ZSBvIGRvY3VtZW50byBlbnRyZWd1ZSDDqSBzZXUgdHJhYmFsaG8gb3JpZ2luYWwgZSBxdWUgZGV0w6ltIG8gZGlyZWl0byBkZSBjb25jZWRlciBvcyBkaXJlaXRvcyBjb250aWRvcyBuZXN0YSBsaWNlbsOnYS4gRGVjbGFyYSB0YW1iw6ltIHF1ZSBhIGVudHJlZ2EgZG8gZG9jdW1lbnRvIG7Do28gaW5mcmluZ2UsIHRhbnRvIHF1YW50byBsaGUgw6kgcG9zc8OtdmVsIHNhYmVyLCBvcyBkaXJlaXRvcyBkZSBxdWFscXVlciBwZXNzb2Egb3UgZW50aWRhZGUuCgpiKVNlIG8gZG9jdW1lbnRvIGVudHJlZ3VlIGNvbnTDqW0gbWF0ZXJpYWwgZG8gcXVhbCBuw6NvIGRldMOpbSBvcyBkaXJlaXRvcyBkZSBhdXRvciwgZGVjbGFyYSBxdWUgb2J0ZXZlIGF1dG9yaXphw6fDo28gZG8gZGV0ZW50b3IgZG9zIGRpcmVpdG9zIGRlIGF1dG9yIHBhcmEgY29uY2VkZXIgw6AgVW5pdmVyc2lkYWRlIEZlZGVyYWwgZGUgT3VybyBQcmV0by9VRk9QIG9zIGRpcmVpdG9zIHJlcXVlcmlkb3MgcG9yIGVzdGEgbGljZW7Dp2EgZSBxdWUgZXNzZSBtYXRlcmlhbCwgY3Vqb3MgZGlyZWl0b3Mgc8OjbyBkZSB0ZXJjZWlyb3MsIGVzdMOhIGNsYXJhbWVudGUgaWRlbnRpZmljYWRvIGUgcmVjb25oZWNpZG8gbm8gdGV4dG8gb3UgY29udGXDumRvcyBkbyBkb2N1bWVudG8gZW50cmVndWUuCgpjKVNlIG8gZG9jdW1lbnRvIGVudHJlZ3VlIMOpIGJhc2VhZG8gZW0gdHJhYmFsaG8gZmluYW5jaWFkbyBvdSBhcG9pYWRvIHBvciBvdXRyYSBpbnN0aXR1acOnw6NvIHF1ZSBuw6NvIGEgVUZPUCwgZGVjbGFyYSBxdWUgY3VtcHJpdSBxdWFpc3F1ZXIgb2JyaWdhw6fDtWVzIGV4aWdpZGFzIHBlbG8gY29udHJhdG8gb3UgYWNvcmRvLgoKRepositório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332018-04-02T14:24:37Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false
dc.title.pt_BR.fl_str_mv A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
title A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
spellingShingle A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
Duarte, Anderson Ribeiro
Spatial scan statistic
Irregular clusters
Multi-objective algorithms
Compactness Function
title_short A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
title_full A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
title_fullStr A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
title_full_unstemmed A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
title_sort A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters.
author Duarte, Anderson Ribeiro
author_facet Duarte, Anderson Ribeiro
Silva, Spencer Barbosa da
Oliveira, Fernando Luiz Pereira de
Ribeiro, Marcelo Carlos
Cançado, André Luiz Fernandes
Moura, Flávio dos Reis
author_role author
author2 Silva, Spencer Barbosa da
Oliveira, Fernando Luiz Pereira de
Ribeiro, Marcelo Carlos
Cançado, André Luiz Fernandes
Moura, Flávio dos Reis
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Duarte, Anderson Ribeiro
Silva, Spencer Barbosa da
Oliveira, Fernando Luiz Pereira de
Ribeiro, Marcelo Carlos
Cançado, André Luiz Fernandes
Moura, Flávio dos Reis
dc.subject.por.fl_str_mv Spatial scan statistic
Irregular clusters
Multi-objective algorithms
Compactness Function
topic Spatial scan statistic
Irregular clusters
Multi-objective algorithms
Compactness Function
description Methods for the detection and inference of irregularly shaped geographic clusters with count data are important tools in disease surveillance and epidemiology. Recently, several methods were developed which combine Kulldorff’s Spatial Scan Statistic with some penalty function to control the excessive freedom of shape of spatial clusters. Different penalty functions were conceived based on the cluster geometric shape or on the adjacency structure and non-connectivity of the cluster associated graph. Those penalty function were also implemented using the framework of multi-objective optimization methods. In particular, the non-connectivity penalty was shown to be very effective in cluster detection. Basically, the non-connectivity penalty function relies on the adjacency structure of the cluster’s associated graph but it does not take into account the population distribution within the cluster. Here we introduce a modification of the non-connectivity penalty function, introducing weights in the components of the penalty function according to the cluster population distribution. Our methods is able to identify multiple clusters in the study area. We show through numerical simulations that our weighted non-connectivity penalty function outperforms the original non-connectivity function in terms of power of detection, sensitivity and positive predictive value, also being computationally fast. Both single-objective and multi-objective versions of the algorithm are implemented and compared.
publishDate 2017
dc.date.issued.fl_str_mv 2017
dc.date.accessioned.fl_str_mv 2018-04-02T14:24:37Z
dc.date.available.fl_str_mv 2018-04-02T14:24:37Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv DUARTE, A. R. et al. A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters. Revista Brasileira de Biometria, v. 35, p. 160-173, n. 2017. Disponível em: <http://www.biometria.ufla.br/index.php/BBJ/article/view/124>. Acesso em: 16 jan. 2018.
dc.identifier.uri.fl_str_mv http://www.repositorio.ufop.br/handle/123456789/9794
dc.identifier.issn.none.fl_str_mv 19830823
identifier_str_mv DUARTE, A. R. et al. A weighted non-connectivity penalty for detection and inference of irregularly shaped clusters. Revista Brasileira de Biometria, v. 35, p. 160-173, n. 2017. Disponível em: <http://www.biometria.ufla.br/index.php/BBJ/article/view/124>. Acesso em: 16 jan. 2018.
19830823
url http://www.repositorio.ufop.br/handle/123456789/9794
dc.language.iso.fl_str_mv eng
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eu_rights_str_mv openAccess
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instname:Universidade Federal de Ouro Preto (UFOP)
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instname_str Universidade Federal de Ouro Preto (UFOP)
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reponame_str Repositório Institucional da UFOP
collection Repositório Institucional da UFOP
bitstream.url.fl_str_mv http://www.repositorio.ufop.br/bitstream/123456789/9794/2/license.txt
http://www.repositorio.ufop.br/bitstream/123456789/9794/1/ARTIGO_WeightedNonConnectivity.pdf
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