A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFLA |
Texto Completo: | http://www.biometria.ufla.br/index.php/BBJ/article/view/124 http://repositorio.ufla.br/jspui/handle/1/13934 |
Resumo: | Methods for the detection and inference of irregularly shaped geographic clusters with count data are important tools in disease surveillance and epidemiology. Recently, several methods were developed which combine Kulldorff’s Spatial Scan Statistic with some penalty function to control the excessive freedom of shape of spatial clusters. Different penalty functions were conceived based on the cluster geometric shape or on the adjacency structure and non-connectivity of the cluster associated graph. Those penalty functions were also implemented using the framework of multi-objective optimization methods. In particular, the non-connectivity penalty was shown to be very effective in cluster detection. Basically, the non-connectivity penalty function relies on the adjacency structure of the cluster’s associated graph but it does not take into account the population distribution within the cluster. Here we introduce a modification of the non-connectivity penalty function, introducing weights in the components of the penalty function according to the cluster population distribution. Our methods are able to identify multiple clusters in the study area. We show through numerical simulations that our weighted non-connectivity penalty function outperforms the original non-connectivity function in terms of power of detection, sensitivity and positive predictive value, also being computationally fast. Both single-objective and multi-objective versions of the algorithm are implemented and compared. |
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A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERSMethods for the detection and inference of irregularly shaped geographic clusters with count data are important tools in disease surveillance and epidemiology. Recently, several methods were developed which combine Kulldorff’s Spatial Scan Statistic with some penalty function to control the excessive freedom of shape of spatial clusters. Different penalty functions were conceived based on the cluster geometric shape or on the adjacency structure and non-connectivity of the cluster associated graph. Those penalty functions were also implemented using the framework of multi-objective optimization methods. In particular, the non-connectivity penalty was shown to be very effective in cluster detection. Basically, the non-connectivity penalty function relies on the adjacency structure of the cluster’s associated graph but it does not take into account the population distribution within the cluster. Here we introduce a modification of the non-connectivity penalty function, introducing weights in the components of the penalty function according to the cluster population distribution. Our methods are able to identify multiple clusters in the study area. We show through numerical simulations that our weighted non-connectivity penalty function outperforms the original non-connectivity function in terms of power of detection, sensitivity and positive predictive value, also being computationally fast. Both single-objective and multi-objective versions of the algorithm are implemented and compared.Editora UFLA - Universidade Federal de Lavras - UFLAAgradecimentos ao Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) e a Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) pelo auxílio financeiro.DUARTE, Anderson RibeiroSILVA, Spencer Barbosa daOLIVEIRA, Fernando Luiz Pereira deRIBEIRO, Marcelo CarlosCANÇADO, André Luiz FernandesMOURA, Flávio dos Reis2017-03-312017-08-01T20:09:48Z2017-08-01T20:09:48Z2017-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionPeer-reviewed Articleapplication/pdfhttp://www.biometria.ufla.br/index.php/BBJ/article/view/124http://repositorio.ufla.br/jspui/handle/1/13934REVISTA BRASILEIRA DE BIOMETRIA; Vol 35 No 1 (2017); 160-1731983-0823reponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAenghttp://www.biometria.ufla.br/index.php/BBJ/article/view/124/92info:eu-repo/semantics/openAccess2017-08-01T20:09:48Zoai:localhost:1/13934Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2017-08-01T20:09:48Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false |
dc.title.none.fl_str_mv |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
title |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
spellingShingle |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS DUARTE, Anderson Ribeiro |
title_short |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
title_full |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
title_fullStr |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
title_full_unstemmed |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
title_sort |
A WEIGHTED NON-CONNECTIVITY PENALTY FOR DETECTION AND INFERENCE OF IRREGULARLY SHAPED CLUSTERS |
author |
DUARTE, Anderson Ribeiro |
author_facet |
DUARTE, Anderson Ribeiro SILVA, Spencer Barbosa da OLIVEIRA, Fernando Luiz Pereira de RIBEIRO, Marcelo Carlos CANÇADO, André Luiz Fernandes MOURA, Flávio dos Reis |
author_role |
author |
author2 |
SILVA, Spencer Barbosa da OLIVEIRA, Fernando Luiz Pereira de RIBEIRO, Marcelo Carlos CANÇADO, André Luiz Fernandes MOURA, Flávio dos Reis |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Agradecimentos ao Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) e a Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) pelo auxílio financeiro. |
dc.contributor.author.fl_str_mv |
DUARTE, Anderson Ribeiro SILVA, Spencer Barbosa da OLIVEIRA, Fernando Luiz Pereira de RIBEIRO, Marcelo Carlos CANÇADO, André Luiz Fernandes MOURA, Flávio dos Reis |
description |
Methods for the detection and inference of irregularly shaped geographic clusters with count data are important tools in disease surveillance and epidemiology. Recently, several methods were developed which combine Kulldorff’s Spatial Scan Statistic with some penalty function to control the excessive freedom of shape of spatial clusters. Different penalty functions were conceived based on the cluster geometric shape or on the adjacency structure and non-connectivity of the cluster associated graph. Those penalty functions were also implemented using the framework of multi-objective optimization methods. In particular, the non-connectivity penalty was shown to be very effective in cluster detection. Basically, the non-connectivity penalty function relies on the adjacency structure of the cluster’s associated graph but it does not take into account the population distribution within the cluster. Here we introduce a modification of the non-connectivity penalty function, introducing weights in the components of the penalty function according to the cluster population distribution. Our methods are able to identify multiple clusters in the study area. We show through numerical simulations that our weighted non-connectivity penalty function outperforms the original non-connectivity function in terms of power of detection, sensitivity and positive predictive value, also being computationally fast. Both single-objective and multi-objective versions of the algorithm are implemented and compared. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-03-31 2017-08-01T20:09:48Z 2017-08-01T20:09:48Z 2017-08-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Peer-reviewed Article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.biometria.ufla.br/index.php/BBJ/article/view/124 http://repositorio.ufla.br/jspui/handle/1/13934 |
url |
http://www.biometria.ufla.br/index.php/BBJ/article/view/124 http://repositorio.ufla.br/jspui/handle/1/13934 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
http://www.biometria.ufla.br/index.php/BBJ/article/view/124/92 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Editora UFLA - Universidade Federal de Lavras - UFLA |
publisher.none.fl_str_mv |
Editora UFLA - Universidade Federal de Lavras - UFLA |
dc.source.none.fl_str_mv |
REVISTA BRASILEIRA DE BIOMETRIA; Vol 35 No 1 (2017); 160-173 1983-0823 reponame:Repositório Institucional da UFLA instname:Universidade Federal de Lavras (UFLA) instacron:UFLA |
instname_str |
Universidade Federal de Lavras (UFLA) |
instacron_str |
UFLA |
institution |
UFLA |
reponame_str |
Repositório Institucional da UFLA |
collection |
Repositório Institucional da UFLA |
repository.name.fl_str_mv |
Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA) |
repository.mail.fl_str_mv |
nivaldo@ufla.br || repositorio.biblioteca@ufla.br |
_version_ |
1815439202262712320 |