Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.

Detalhes bibliográficos
Autor(a) principal: Moreno, Natália Cestari
Data de Publicação: 2020
Outros Autores: Souza, Tiago Antonio de, Garcia, Camila Carrião Machado, Quintero Ruiz, Nathalia, Corradi, Camila, Castro, Ligia Pereira, Munford, Veridiana, Ienne, Susan, Alexandrov, Ludmil B., Menck, Carlos Frederico Martins
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFOP
Texto Completo: http://www.repositorio.ufop.br/jspui/handle/123456789/13837
https://doi.org/10.1093/nar/gkz1182
Resumo: UVA-induced mutagenesis was investigated in human pol eta-deficient (XP-V) cells through wholeexome sequencing. In UVA-irradiated cells, the increase in the mutation frequency in deficient cells included a remarkable contribution of C>T transitions, mainly at potential pyrimidine dimer sites. A strong contribution of C>A transversions, potentially due to oxidized bases, was also observed in nonirradiated XP-V cells, indicating that basal mutagenesis caused by oxidative stress may be related to internal tumours in XP-V patients. The low levels of mutations involving T induced by UVA indicate that pol eta is not responsible for correctly replicating Tcontaining pyrimidine dimers, a phenomenon known as the ‘A-rule’. Moreover, the mutation signature profile of UVA-irradiated XP-V cells is highly similar to the human skin cancer profile, revealing how studies involving cells deficient in DNA damage processing may be useful to understand the mechanisms of environmentally induced carcinogenesis.
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spelling Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.UVA-induced mutagenesis was investigated in human pol eta-deficient (XP-V) cells through wholeexome sequencing. In UVA-irradiated cells, the increase in the mutation frequency in deficient cells included a remarkable contribution of C>T transitions, mainly at potential pyrimidine dimer sites. A strong contribution of C>A transversions, potentially due to oxidized bases, was also observed in nonirradiated XP-V cells, indicating that basal mutagenesis caused by oxidative stress may be related to internal tumours in XP-V patients. The low levels of mutations involving T induced by UVA indicate that pol eta is not responsible for correctly replicating Tcontaining pyrimidine dimers, a phenomenon known as the ‘A-rule’. Moreover, the mutation signature profile of UVA-irradiated XP-V cells is highly similar to the human skin cancer profile, revealing how studies involving cells deficient in DNA damage processing may be useful to understand the mechanisms of environmentally induced carcinogenesis.2021-09-30T17:51:03Z2021-09-30T17:51:03Z2020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfMORENO, N. C. et al. Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Nucleic Acids Research, v. 48, n. 4, p. 1941-1953, 2020. Disponível em: <https://academic.oup.com/nar/article/48/4/1941/5680704>. Acesso em: 10 jun. 2021.1362-4962http://www.repositorio.ufop.br/jspui/handle/123456789/13837https://doi.org/10.1093/nar/gkz1182This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. Fonte: o PDF do artigo.info:eu-repo/semantics/openAccessMoreno, Natália CestariSouza, Tiago Antonio deGarcia, Camila Carrião MachadoQuintero Ruiz, NathaliaCorradi, CamilaCastro, Ligia PereiraMunford, VeridianaIenne, SusanAlexandrov, Ludmil B.Menck, Carlos Frederico Martinsengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOP2021-09-30T17:51:11Zoai:repositorio.ufop.br:123456789/13837Repositório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332021-09-30T17:51:11Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false
dc.title.none.fl_str_mv Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
title Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
spellingShingle Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
Moreno, Natália Cestari
title_short Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
title_full Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
title_fullStr Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
title_full_unstemmed Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
title_sort Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
author Moreno, Natália Cestari
author_facet Moreno, Natália Cestari
Souza, Tiago Antonio de
Garcia, Camila Carrião Machado
Quintero Ruiz, Nathalia
Corradi, Camila
Castro, Ligia Pereira
Munford, Veridiana
Ienne, Susan
Alexandrov, Ludmil B.
Menck, Carlos Frederico Martins
author_role author
author2 Souza, Tiago Antonio de
Garcia, Camila Carrião Machado
Quintero Ruiz, Nathalia
Corradi, Camila
Castro, Ligia Pereira
Munford, Veridiana
Ienne, Susan
Alexandrov, Ludmil B.
Menck, Carlos Frederico Martins
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Moreno, Natália Cestari
Souza, Tiago Antonio de
Garcia, Camila Carrião Machado
Quintero Ruiz, Nathalia
Corradi, Camila
Castro, Ligia Pereira
Munford, Veridiana
Ienne, Susan
Alexandrov, Ludmil B.
Menck, Carlos Frederico Martins
description UVA-induced mutagenesis was investigated in human pol eta-deficient (XP-V) cells through wholeexome sequencing. In UVA-irradiated cells, the increase in the mutation frequency in deficient cells included a remarkable contribution of C>T transitions, mainly at potential pyrimidine dimer sites. A strong contribution of C>A transversions, potentially due to oxidized bases, was also observed in nonirradiated XP-V cells, indicating that basal mutagenesis caused by oxidative stress may be related to internal tumours in XP-V patients. The low levels of mutations involving T induced by UVA indicate that pol eta is not responsible for correctly replicating Tcontaining pyrimidine dimers, a phenomenon known as the ‘A-rule’. Moreover, the mutation signature profile of UVA-irradiated XP-V cells is highly similar to the human skin cancer profile, revealing how studies involving cells deficient in DNA damage processing may be useful to understand the mechanisms of environmentally induced carcinogenesis.
publishDate 2020
dc.date.none.fl_str_mv 2020
2021-09-30T17:51:03Z
2021-09-30T17:51:03Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv MORENO, N. C. et al. Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Nucleic Acids Research, v. 48, n. 4, p. 1941-1953, 2020. Disponível em: <https://academic.oup.com/nar/article/48/4/1941/5680704>. Acesso em: 10 jun. 2021.
1362-4962
http://www.repositorio.ufop.br/jspui/handle/123456789/13837
https://doi.org/10.1093/nar/gkz1182
identifier_str_mv MORENO, N. C. et al. Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Nucleic Acids Research, v. 48, n. 4, p. 1941-1953, 2020. Disponível em: <https://academic.oup.com/nar/article/48/4/1941/5680704>. Acesso em: 10 jun. 2021.
1362-4962
url http://www.repositorio.ufop.br/jspui/handle/123456789/13837
https://doi.org/10.1093/nar/gkz1182
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFOP
instname:Universidade Federal de Ouro Preto (UFOP)
instacron:UFOP
instname_str Universidade Federal de Ouro Preto (UFOP)
instacron_str UFOP
institution UFOP
reponame_str Repositório Institucional da UFOP
collection Repositório Institucional da UFOP
repository.name.fl_str_mv Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)
repository.mail.fl_str_mv repositorio@ufop.edu.br
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