Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFOP |
Texto Completo: | http://www.repositorio.ufop.br/jspui/handle/123456789/13837 https://doi.org/10.1093/nar/gkz1182 |
Resumo: | UVA-induced mutagenesis was investigated in human pol eta-deficient (XP-V) cells through wholeexome sequencing. In UVA-irradiated cells, the increase in the mutation frequency in deficient cells included a remarkable contribution of C>T transitions, mainly at potential pyrimidine dimer sites. A strong contribution of C>A transversions, potentially due to oxidized bases, was also observed in nonirradiated XP-V cells, indicating that basal mutagenesis caused by oxidative stress may be related to internal tumours in XP-V patients. The low levels of mutations involving T induced by UVA indicate that pol eta is not responsible for correctly replicating Tcontaining pyrimidine dimers, a phenomenon known as the ‘A-rule’. Moreover, the mutation signature profile of UVA-irradiated XP-V cells is highly similar to the human skin cancer profile, revealing how studies involving cells deficient in DNA damage processing may be useful to understand the mechanisms of environmentally induced carcinogenesis. |
id |
UFOP_b37a73051350cf187ead4b46044cbbc9 |
---|---|
oai_identifier_str |
oai:repositorio.ufop.br:123456789/13837 |
network_acronym_str |
UFOP |
network_name_str |
Repositório Institucional da UFOP |
repository_id_str |
3233 |
spelling |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells.UVA-induced mutagenesis was investigated in human pol eta-deficient (XP-V) cells through wholeexome sequencing. In UVA-irradiated cells, the increase in the mutation frequency in deficient cells included a remarkable contribution of C>T transitions, mainly at potential pyrimidine dimer sites. A strong contribution of C>A transversions, potentially due to oxidized bases, was also observed in nonirradiated XP-V cells, indicating that basal mutagenesis caused by oxidative stress may be related to internal tumours in XP-V patients. The low levels of mutations involving T induced by UVA indicate that pol eta is not responsible for correctly replicating Tcontaining pyrimidine dimers, a phenomenon known as the ‘A-rule’. Moreover, the mutation signature profile of UVA-irradiated XP-V cells is highly similar to the human skin cancer profile, revealing how studies involving cells deficient in DNA damage processing may be useful to understand the mechanisms of environmentally induced carcinogenesis.2021-09-30T17:51:03Z2021-09-30T17:51:03Z2020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfMORENO, N. C. et al. Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Nucleic Acids Research, v. 48, n. 4, p. 1941-1953, 2020. Disponível em: <https://academic.oup.com/nar/article/48/4/1941/5680704>. Acesso em: 10 jun. 2021.1362-4962http://www.repositorio.ufop.br/jspui/handle/123456789/13837https://doi.org/10.1093/nar/gkz1182This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. Fonte: o PDF do artigo.info:eu-repo/semantics/openAccessMoreno, Natália CestariSouza, Tiago Antonio deGarcia, Camila Carrião MachadoQuintero Ruiz, NathaliaCorradi, CamilaCastro, Ligia PereiraMunford, VeridianaIenne, SusanAlexandrov, Ludmil B.Menck, Carlos Frederico Martinsengreponame:Repositório Institucional da UFOPinstname:Universidade Federal de Ouro Preto (UFOP)instacron:UFOP2021-09-30T17:51:11Zoai:repositorio.ufop.br:123456789/13837Repositório InstitucionalPUBhttp://www.repositorio.ufop.br/oai/requestrepositorio@ufop.edu.bropendoar:32332021-09-30T17:51:11Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP)false |
dc.title.none.fl_str_mv |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
title |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
spellingShingle |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Moreno, Natália Cestari |
title_short |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
title_full |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
title_fullStr |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
title_full_unstemmed |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
title_sort |
Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. |
author |
Moreno, Natália Cestari |
author_facet |
Moreno, Natália Cestari Souza, Tiago Antonio de Garcia, Camila Carrião Machado Quintero Ruiz, Nathalia Corradi, Camila Castro, Ligia Pereira Munford, Veridiana Ienne, Susan Alexandrov, Ludmil B. Menck, Carlos Frederico Martins |
author_role |
author |
author2 |
Souza, Tiago Antonio de Garcia, Camila Carrião Machado Quintero Ruiz, Nathalia Corradi, Camila Castro, Ligia Pereira Munford, Veridiana Ienne, Susan Alexandrov, Ludmil B. Menck, Carlos Frederico Martins |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Moreno, Natália Cestari Souza, Tiago Antonio de Garcia, Camila Carrião Machado Quintero Ruiz, Nathalia Corradi, Camila Castro, Ligia Pereira Munford, Veridiana Ienne, Susan Alexandrov, Ludmil B. Menck, Carlos Frederico Martins |
description |
UVA-induced mutagenesis was investigated in human pol eta-deficient (XP-V) cells through wholeexome sequencing. In UVA-irradiated cells, the increase in the mutation frequency in deficient cells included a remarkable contribution of C>T transitions, mainly at potential pyrimidine dimer sites. A strong contribution of C>A transversions, potentially due to oxidized bases, was also observed in nonirradiated XP-V cells, indicating that basal mutagenesis caused by oxidative stress may be related to internal tumours in XP-V patients. The low levels of mutations involving T induced by UVA indicate that pol eta is not responsible for correctly replicating Tcontaining pyrimidine dimers, a phenomenon known as the ‘A-rule’. Moreover, the mutation signature profile of UVA-irradiated XP-V cells is highly similar to the human skin cancer profile, revealing how studies involving cells deficient in DNA damage processing may be useful to understand the mechanisms of environmentally induced carcinogenesis. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020 2021-09-30T17:51:03Z 2021-09-30T17:51:03Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
MORENO, N. C. et al. Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Nucleic Acids Research, v. 48, n. 4, p. 1941-1953, 2020. Disponível em: <https://academic.oup.com/nar/article/48/4/1941/5680704>. Acesso em: 10 jun. 2021. 1362-4962 http://www.repositorio.ufop.br/jspui/handle/123456789/13837 https://doi.org/10.1093/nar/gkz1182 |
identifier_str_mv |
MORENO, N. C. et al. Whole-exome sequencing reveals the impact of UVA light mutagenesis in xeroderma pigmentosum variant human cells. Nucleic Acids Research, v. 48, n. 4, p. 1941-1953, 2020. Disponível em: <https://academic.oup.com/nar/article/48/4/1941/5680704>. Acesso em: 10 jun. 2021. 1362-4962 |
url |
http://www.repositorio.ufop.br/jspui/handle/123456789/13837 https://doi.org/10.1093/nar/gkz1182 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFOP instname:Universidade Federal de Ouro Preto (UFOP) instacron:UFOP |
instname_str |
Universidade Federal de Ouro Preto (UFOP) |
instacron_str |
UFOP |
institution |
UFOP |
reponame_str |
Repositório Institucional da UFOP |
collection |
Repositório Institucional da UFOP |
repository.name.fl_str_mv |
Repositório Institucional da UFOP - Universidade Federal de Ouro Preto (UFOP) |
repository.mail.fl_str_mv |
repositorio@ufop.edu.br |
_version_ |
1813002835625771008 |