Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil

Detalhes bibliográficos
Autor(a) principal: RODRIGUES-FILHO, Luis Fernando da Silva
Data de Publicação: 2009
Outros Autores: ROCHA, Tainá Carreira da, RÊGO, Péricles Sena do, SCHNEIDER, Horacio, SAMPAIO, Maria Iracilda da Cunha, SOUZA, Marcelo Nazareno Vallinoto de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFPA
Texto Completo: http://www.repositorio.ufpa.br:8080/jspui/handle/2011/2206
Resumo: The ongoing decline in abundance and diversity of shark stocks, primarily due to uncontrolled fishery exploitation, is a worldwide problem. An additional problem for the development of conservation and management programmes is the identification of species diversity within a given area, given the morphological similarities among shark species, and the typical disembarkation of processed carcasses which are almost impossible to differentiate. The main aim of the present study was to identify those shark species being exploited off northern Brazil, by using the 12S-16S molecular marker. For this, DNA sequences were obtained from 122 specimens collected on the docks and the fish market in Bragança, in the Brazilian state of Pará. We identified at least 11 species. Three-quarters of the specimens collected were either Carcharhinus porosus or Rhizoprionodon sp, while a notable absence was the daggernose shark, Isogomphodon oxyrhyncus, previously one of the most common species in local catches. The study emphasises the value of molecular techniques for the identification of cryptic shark species, and the potential of the 12S-16S marker as a tool for phylogenetic inferences in a study of elasmobranchs.
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spelling 2011-05-24T19:52:01Z2011-05-24T19:52:01Z2009RODRIGUES-FILHO, Luis Fernando da Silva et al. Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil. Genetics and Molecular Biology, São Paulo, v. 32, n. 2, p. 405-413, 2009. Disponível em: <http://www.scielo.br/pdf/gmb/v32n2/2008-175.pdf>. Acesso em: 15 mar. 2011. <http://dx.doi.org/10.1590/S1415-47572009005000039>.1415-4757http://www.repositorio.ufpa.br:8080/jspui/handle/2011/2206The ongoing decline in abundance and diversity of shark stocks, primarily due to uncontrolled fishery exploitation, is a worldwide problem. An additional problem for the development of conservation and management programmes is the identification of species diversity within a given area, given the morphological similarities among shark species, and the typical disembarkation of processed carcasses which are almost impossible to differentiate. The main aim of the present study was to identify those shark species being exploited off northern Brazil, by using the 12S-16S molecular marker. For this, DNA sequences were obtained from 122 specimens collected on the docks and the fish market in Bragança, in the Brazilian state of Pará. We identified at least 11 species. Three-quarters of the specimens collected were either Carcharhinus porosus or Rhizoprionodon sp, while a notable absence was the daggernose shark, Isogomphodon oxyrhyncus, previously one of the most common species in local catches. The study emphasises the value of molecular techniques for the identification of cryptic shark species, and the potential of the 12S-16S marker as a tool for phylogenetic inferences in a study of elasmobranchs.engTubarão (Peixe)FilogeniaGenética de populaçõesDNA mitocondrialPará - EstadoAmazônia brasileiraIdentification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleRODRIGUES-FILHO, Luis Fernando da SilvaROCHA, Tainá Carreira daRÊGO, Péricles Sena doSCHNEIDER, HoracioSAMPAIO, Maria Iracilda da CunhaSOUZA, Marcelo Nazareno Vallinoto deinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFPAinstname:Universidade Federal do Pará (UFPA)instacron:UFPAORIGINALArtigo_IdentificationPhylogeneticInferences.pdfArtigo_IdentificationPhylogeneticInferences.pdfapplication/pdf145697http://repositorio.ufpa.br/oai/bitstream/2011/2206/1/Artigo_IdentificationPhylogeneticInferences.pdf40746326a20cc0fe8fb1f9f16b81e5cfMD51CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://repositorio.ufpa.br/oai/bitstream/2011/2206/2/license_urlfd26723f8d7edacdb29e3f03465c3b03MD52license_textlicense_texttext/html; charset=utf-820904http://repositorio.ufpa.br/oai/bitstream/2011/2206/3/license_texte09bf99e64678e4285abf3ef3e05412dMD53license_rdflicense_rdfapplication/rdf+xml; charset=utf-823422http://repositorio.ufpa.br/oai/bitstream/2011/2206/4/license_rdfb145eda3d84bdc4f56b389c0ab98d368MD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.ufpa.br/oai/bitstream/2011/2206/5/license.txt8a4605be74aa9ea9d79846c1fba20a33MD55TEXTArtigo_IdentificationPhylogeneticInferences.pdf.txtArtigo_IdentificationPhylogeneticInferences.pdf.txtExtracted texttext/plain39789http://repositorio.ufpa.br/oai/bitstream/2011/2206/6/Artigo_IdentificationPhylogeneticInferences.pdf.txteaaabbe8882b651741e955424a1ee6aeMD562011/22062019-05-22 11:50:58.631oai:repositorio.ufpa.br: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Repositório InstitucionalPUBhttp://repositorio.ufpa.br/oai/requestriufpabc@ufpa.bropendoar:21232019-05-22T14:50:58Repositório Institucional da UFPA - Universidade Federal do Pará (UFPA)false
dc.title.pt_BR.fl_str_mv Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
title Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
spellingShingle Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
RODRIGUES-FILHO, Luis Fernando da Silva
Tubarão (Peixe)
Filogenia
Genética de populações
DNA mitocondrial
Pará - Estado
Amazônia brasileira
title_short Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
title_full Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
title_fullStr Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
title_full_unstemmed Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
title_sort Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil
author RODRIGUES-FILHO, Luis Fernando da Silva
author_facet RODRIGUES-FILHO, Luis Fernando da Silva
ROCHA, Tainá Carreira da
RÊGO, Péricles Sena do
SCHNEIDER, Horacio
SAMPAIO, Maria Iracilda da Cunha
SOUZA, Marcelo Nazareno Vallinoto de
author_role author
author2 ROCHA, Tainá Carreira da
RÊGO, Péricles Sena do
SCHNEIDER, Horacio
SAMPAIO, Maria Iracilda da Cunha
SOUZA, Marcelo Nazareno Vallinoto de
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv RODRIGUES-FILHO, Luis Fernando da Silva
ROCHA, Tainá Carreira da
RÊGO, Péricles Sena do
SCHNEIDER, Horacio
SAMPAIO, Maria Iracilda da Cunha
SOUZA, Marcelo Nazareno Vallinoto de
dc.subject.por.fl_str_mv Tubarão (Peixe)
Filogenia
Genética de populações
DNA mitocondrial
Pará - Estado
Amazônia brasileira
topic Tubarão (Peixe)
Filogenia
Genética de populações
DNA mitocondrial
Pará - Estado
Amazônia brasileira
description The ongoing decline in abundance and diversity of shark stocks, primarily due to uncontrolled fishery exploitation, is a worldwide problem. An additional problem for the development of conservation and management programmes is the identification of species diversity within a given area, given the morphological similarities among shark species, and the typical disembarkation of processed carcasses which are almost impossible to differentiate. The main aim of the present study was to identify those shark species being exploited off northern Brazil, by using the 12S-16S molecular marker. For this, DNA sequences were obtained from 122 specimens collected on the docks and the fish market in Bragança, in the Brazilian state of Pará. We identified at least 11 species. Three-quarters of the specimens collected were either Carcharhinus porosus or Rhizoprionodon sp, while a notable absence was the daggernose shark, Isogomphodon oxyrhyncus, previously one of the most common species in local catches. The study emphasises the value of molecular techniques for the identification of cryptic shark species, and the potential of the 12S-16S marker as a tool for phylogenetic inferences in a study of elasmobranchs.
publishDate 2009
dc.date.issued.fl_str_mv 2009
dc.date.accessioned.fl_str_mv 2011-05-24T19:52:01Z
dc.date.available.fl_str_mv 2011-05-24T19:52:01Z
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dc.identifier.citation.fl_str_mv RODRIGUES-FILHO, Luis Fernando da Silva et al. Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil. Genetics and Molecular Biology, São Paulo, v. 32, n. 2, p. 405-413, 2009. Disponível em: <http://www.scielo.br/pdf/gmb/v32n2/2008-175.pdf>. Acesso em: 15 mar. 2011. <http://dx.doi.org/10.1590/S1415-47572009005000039>.
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identifier_str_mv RODRIGUES-FILHO, Luis Fernando da Silva et al. Identification and phylogenetic inferences on stocks of sharks affected by the fishing industry off the Northern coast of Brazil. Genetics and Molecular Biology, São Paulo, v. 32, n. 2, p. 405-413, 2009. Disponível em: <http://www.scielo.br/pdf/gmb/v32n2/2008-175.pdf>. Acesso em: 15 mar. 2011. <http://dx.doi.org/10.1590/S1415-47572009005000039>.
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