Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da UFPel - Guaiaca |
Texto Completo: | http://repositorio.ufpel.edu.br/handle/ri/1145 |
Resumo: | Based on the advanced knowledge in genomic, marker-assisted selection shows up as a promising strategy especially to accelerate the development of new cultivars in perennial species, such as peach. In this context, this dissertation addressed the current situation and the prospects of using marker-assisted selection in peach breeding programs as well as to characterize the genetic variability and population structure of an association panel representative of peach germplasm available in Brazil through SSR analysis. Based on a literature review, it was seen that a high number of QTL (Quantitative Trait Loci) is identified in genetic maps of peach, but, despite the importance of the characters studied, the use of markerassisted selection has been incipient by breeding programs. By the other side, with the recent completion of the sequencing of the peach genome, the perspective is that the low use of molecular tools by peach breeding program will change in the coming years. In this trend, the genetic variability present in the association panel representative of peach germplasm in Brazil is quite relevant. On the other hand, this germplasm is structured into two subpopulations according to the fruit flesh type, melting or non-melting, with some genotypes being a mixture of both types of fruit flesh. Greater variability is available in the melting flesh group. These results show that the association panel is suitable for association studies given its relevant genetic variability. However, it should be taken into account in the association studies the genetic structure intrinsic to this germplasm to avoid the identification of false markertrait associations. |
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http://lattes.cnpq.br/3675128575984460http://lattes.cnpq.br/6461716944613921Castro, Caroline MarquesThurow, Liane Bahr2014-08-20T13:25:38Z2014-04-072014-08-20T13:25:38Z2013-10-18THUROW, Liane Bahr. Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil. 2013. 131 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Pelotas, Pelotas, 2013.http://repositorio.ufpel.edu.br/handle/ri/1145Based on the advanced knowledge in genomic, marker-assisted selection shows up as a promising strategy especially to accelerate the development of new cultivars in perennial species, such as peach. In this context, this dissertation addressed the current situation and the prospects of using marker-assisted selection in peach breeding programs as well as to characterize the genetic variability and population structure of an association panel representative of peach germplasm available in Brazil through SSR analysis. Based on a literature review, it was seen that a high number of QTL (Quantitative Trait Loci) is identified in genetic maps of peach, but, despite the importance of the characters studied, the use of markerassisted selection has been incipient by breeding programs. By the other side, with the recent completion of the sequencing of the peach genome, the perspective is that the low use of molecular tools by peach breeding program will change in the coming years. In this trend, the genetic variability present in the association panel representative of peach germplasm in Brazil is quite relevant. On the other hand, this germplasm is structured into two subpopulations according to the fruit flesh type, melting or non-melting, with some genotypes being a mixture of both types of fruit flesh. Greater variability is available in the melting flesh group. These results show that the association panel is suitable for association studies given its relevant genetic variability. However, it should be taken into account in the association studies the genetic structure intrinsic to this germplasm to avoid the identification of false markertrait associations.Com base no avanço do conhecimento de genômica a seleção assistida por marcadores mostra-se como uma estratégia bastante promissora especialmente para acelerar o desenvolvimento de novas cultivares em espécies perenes, como o pessegueiro. Nesse contexto, esta dissertação aborda a situação atual e as perspectivas do uso de seleção assistida por marcadores moleculares no melhoramento genético de pessegueiro, assim como caracteriza a variabilidade genética e a estrutura de população do painel associativo de pessegueiro representativo do germoplasma disponível no Brasil por meio da análise de 10 loci SSR (Simple Sequence Repeats). Com base na literatura, um elevado número de QTLs (Quantitative Trait Loci) está identificado em mapas genéticos de pessegueiro, mas, apesar da importância dos caracteres envolvidos, até o momento o uso de seleção assistida por marcadores tem sido incipiente pelos programas de melhoramento. Por outro lado, com a conclusão recente do sequenciamento do genoma do pessegueiro, a perspectiva é de que essa realidade mude nos próximos anos. Corroborando com essa tendência, o primeiro passo para a seleção assistida por marcadores moleculares é conhecer a variabilidade genética presente no germoplasma de pessegueiro disponível no Brasil. Nesse sentido, os resultados desse trabalho mostram grande variabilidade genética no germoplasma avaliado. Porém, esse germoplasma está estruturado em duas subpopulações bem definidas e agrupadas de acordo com o tipo de polpa, fundente e não-fundente, com alguns acessos apresentando mistura de ambos, entre os quais a maior variabilidade está disponível dentro do subgrupo fundente. Com base nos resultados infere-se que o germoplasma avaliado é adequado para estudos de mapeamento associativo, dada a sua expressiva variabilidade genética, mas deve ser levada em consideração a estrutura genética desse germplasma a fim de evitar a identificação de associações falso-positivas entre marcadores e fenótipos de interesse.application/pdfporUniversidade Federal de PelotasPrograma de Pós-Graduação em AgronomiaUFPelBRFaculdade de Agronomia Eliseu MacielPessegueiroGenômicaRecursos genéticosMarcadores SSRVariabilidade genéticaEstrutura populacionalPeachGenomicsGenetic resourcesSSR markersGenetic variabilityPopulation structureCNPQ::CIENCIAS AGRARIAS::AGRONOMIAEstrutura Genética do Germoplasma de Prunus persica (L.) Batsch no BrasilGenetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFPel - Guaiacainstname:Universidade Federal de Pelotas (UFPEL)instacron:UFPELORIGINALdissertacao_liane_thurow.pdfapplication/pdf690839http://guaiaca.ufpel.edu.br/xmlui/bitstream/123456789/1145/1/dissertacao_liane_thurow.pdf6d23772ac7732bb0c45028fd46e4bcf0MD51open accessTEXTdissertacao_liane_thurow.pdf.txtdissertacao_liane_thurow.pdf.txtExtracted Texttext/plain128151http://guaiaca.ufpel.edu.br/xmlui/bitstream/123456789/1145/2/dissertacao_liane_thurow.pdf.txt00d909de863bc1f775693a8a41c242d1MD52open accessTHUMBNAILdissertacao_liane_thurow.pdf.jpgdissertacao_liane_thurow.pdf.jpgGenerated Thumbnailimage/jpeg1379http://guaiaca.ufpel.edu.br/xmlui/bitstream/123456789/1145/3/dissertacao_liane_thurow.pdf.jpge96259cdebd7717130c60dfbe8db8d04MD53open access123456789/11452022-12-22 20:52:01.172open accessoai:guaiaca.ufpel.edu.br:123456789/1145Repositório InstitucionalPUBhttp://repositorio.ufpel.edu.br/oai/requestrippel@ufpel.edu.br || repositorio@ufpel.edu.br || aline.batista@ufpel.edu.bropendoar:2022-12-22T23:52:01Repositório Institucional da UFPel - Guaiaca - Universidade Federal de Pelotas (UFPEL)false |
dc.title.por.fl_str_mv |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
dc.title.alternative.eng.fl_str_mv |
Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil |
title |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
spellingShingle |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil Thurow, Liane Bahr Pessegueiro Genômica Recursos genéticos Marcadores SSR Variabilidade genética Estrutura populacional Peach Genomics Genetic resources SSR markers Genetic variability Population structure CNPQ::CIENCIAS AGRARIAS::AGRONOMIA |
title_short |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
title_full |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
title_fullStr |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
title_full_unstemmed |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
title_sort |
Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil |
author |
Thurow, Liane Bahr |
author_facet |
Thurow, Liane Bahr |
author_role |
author |
dc.contributor.authorLattes.por.fl_str_mv |
http://lattes.cnpq.br/3675128575984460 |
dc.contributor.advisorLattes.por.fl_str_mv |
http://lattes.cnpq.br/6461716944613921 |
dc.contributor.advisor1.fl_str_mv |
Castro, Caroline Marques |
dc.contributor.author.fl_str_mv |
Thurow, Liane Bahr |
contributor_str_mv |
Castro, Caroline Marques |
dc.subject.por.fl_str_mv |
Pessegueiro Genômica Recursos genéticos Marcadores SSR Variabilidade genética Estrutura populacional |
topic |
Pessegueiro Genômica Recursos genéticos Marcadores SSR Variabilidade genética Estrutura populacional Peach Genomics Genetic resources SSR markers Genetic variability Population structure CNPQ::CIENCIAS AGRARIAS::AGRONOMIA |
dc.subject.eng.fl_str_mv |
Peach Genomics Genetic resources SSR markers Genetic variability Population structure |
dc.subject.cnpq.fl_str_mv |
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA |
description |
Based on the advanced knowledge in genomic, marker-assisted selection shows up as a promising strategy especially to accelerate the development of new cultivars in perennial species, such as peach. In this context, this dissertation addressed the current situation and the prospects of using marker-assisted selection in peach breeding programs as well as to characterize the genetic variability and population structure of an association panel representative of peach germplasm available in Brazil through SSR analysis. Based on a literature review, it was seen that a high number of QTL (Quantitative Trait Loci) is identified in genetic maps of peach, but, despite the importance of the characters studied, the use of markerassisted selection has been incipient by breeding programs. By the other side, with the recent completion of the sequencing of the peach genome, the perspective is that the low use of molecular tools by peach breeding program will change in the coming years. In this trend, the genetic variability present in the association panel representative of peach germplasm in Brazil is quite relevant. On the other hand, this germplasm is structured into two subpopulations according to the fruit flesh type, melting or non-melting, with some genotypes being a mixture of both types of fruit flesh. Greater variability is available in the melting flesh group. These results show that the association panel is suitable for association studies given its relevant genetic variability. However, it should be taken into account in the association studies the genetic structure intrinsic to this germplasm to avoid the identification of false markertrait associations. |
publishDate |
2013 |
dc.date.issued.fl_str_mv |
2013-10-18 |
dc.date.accessioned.fl_str_mv |
2014-08-20T13:25:38Z |
dc.date.available.fl_str_mv |
2014-04-07 2014-08-20T13:25:38Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
THUROW, Liane Bahr. Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil. 2013. 131 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Pelotas, Pelotas, 2013. |
dc.identifier.uri.fl_str_mv |
http://repositorio.ufpel.edu.br/handle/ri/1145 |
identifier_str_mv |
THUROW, Liane Bahr. Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil. 2013. 131 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Pelotas, Pelotas, 2013. |
url |
http://repositorio.ufpel.edu.br/handle/ri/1145 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Pelotas |
dc.publisher.program.fl_str_mv |
Programa de Pós-Graduação em Agronomia |
dc.publisher.initials.fl_str_mv |
UFPel |
dc.publisher.country.fl_str_mv |
BR |
dc.publisher.department.fl_str_mv |
Faculdade de Agronomia Eliseu Maciel |
publisher.none.fl_str_mv |
Universidade Federal de Pelotas |
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