Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil

Detalhes bibliográficos
Autor(a) principal: Thurow, Liane Bahr
Data de Publicação: 2013
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFPel - Guaiaca
Texto Completo: http://repositorio.ufpel.edu.br/handle/ri/1145
Resumo: Based on the advanced knowledge in genomic, marker-assisted selection shows up as a promising strategy especially to accelerate the development of new cultivars in perennial species, such as peach. In this context, this dissertation addressed the current situation and the prospects of using marker-assisted selection in peach breeding programs as well as to characterize the genetic variability and population structure of an association panel representative of peach germplasm available in Brazil through SSR analysis. Based on a literature review, it was seen that a high number of QTL (Quantitative Trait Loci) is identified in genetic maps of peach, but, despite the importance of the characters studied, the use of markerassisted selection has been incipient by breeding programs. By the other side, with the recent completion of the sequencing of the peach genome, the perspective is that the low use of molecular tools by peach breeding program will change in the coming years. In this trend, the genetic variability present in the association panel representative of peach germplasm in Brazil is quite relevant. On the other hand, this germplasm is structured into two subpopulations according to the fruit flesh type, melting or non-melting, with some genotypes being a mixture of both types of fruit flesh. Greater variability is available in the melting flesh group. These results show that the association panel is suitable for association studies given its relevant genetic variability. However, it should be taken into account in the association studies the genetic structure intrinsic to this germplasm to avoid the identification of false markertrait associations.
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spelling http://lattes.cnpq.br/3675128575984460http://lattes.cnpq.br/6461716944613921Castro, Caroline MarquesThurow, Liane Bahr2014-08-20T13:25:38Z2014-04-072014-08-20T13:25:38Z2013-10-18THUROW, Liane Bahr. Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil. 2013. 131 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Pelotas, Pelotas, 2013.http://repositorio.ufpel.edu.br/handle/ri/1145Based on the advanced knowledge in genomic, marker-assisted selection shows up as a promising strategy especially to accelerate the development of new cultivars in perennial species, such as peach. In this context, this dissertation addressed the current situation and the prospects of using marker-assisted selection in peach breeding programs as well as to characterize the genetic variability and population structure of an association panel representative of peach germplasm available in Brazil through SSR analysis. Based on a literature review, it was seen that a high number of QTL (Quantitative Trait Loci) is identified in genetic maps of peach, but, despite the importance of the characters studied, the use of markerassisted selection has been incipient by breeding programs. By the other side, with the recent completion of the sequencing of the peach genome, the perspective is that the low use of molecular tools by peach breeding program will change in the coming years. In this trend, the genetic variability present in the association panel representative of peach germplasm in Brazil is quite relevant. On the other hand, this germplasm is structured into two subpopulations according to the fruit flesh type, melting or non-melting, with some genotypes being a mixture of both types of fruit flesh. Greater variability is available in the melting flesh group. These results show that the association panel is suitable for association studies given its relevant genetic variability. However, it should be taken into account in the association studies the genetic structure intrinsic to this germplasm to avoid the identification of false markertrait associations.Com base no avanço do conhecimento de genômica a seleção assistida por marcadores mostra-se como uma estratégia bastante promissora especialmente para acelerar o desenvolvimento de novas cultivares em espécies perenes, como o pessegueiro. Nesse contexto, esta dissertação aborda a situação atual e as perspectivas do uso de seleção assistida por marcadores moleculares no melhoramento genético de pessegueiro, assim como caracteriza a variabilidade genética e a estrutura de população do painel associativo de pessegueiro representativo do germoplasma disponível no Brasil por meio da análise de 10 loci SSR (Simple Sequence Repeats). Com base na literatura, um elevado número de QTLs (Quantitative Trait Loci) está identificado em mapas genéticos de pessegueiro, mas, apesar da importância dos caracteres envolvidos, até o momento o uso de seleção assistida por marcadores tem sido incipiente pelos programas de melhoramento. Por outro lado, com a conclusão recente do sequenciamento do genoma do pessegueiro, a perspectiva é de que essa realidade mude nos próximos anos. Corroborando com essa tendência, o primeiro passo para a seleção assistida por marcadores moleculares é conhecer a variabilidade genética presente no germoplasma de pessegueiro disponível no Brasil. Nesse sentido, os resultados desse trabalho mostram grande variabilidade genética no germoplasma avaliado. Porém, esse germoplasma está estruturado em duas subpopulações bem definidas e agrupadas de acordo com o tipo de polpa, fundente e não-fundente, com alguns acessos apresentando mistura de ambos, entre os quais a maior variabilidade está disponível dentro do subgrupo fundente. Com base nos resultados infere-se que o germoplasma avaliado é adequado para estudos de mapeamento associativo, dada a sua expressiva variabilidade genética, mas deve ser levada em consideração a estrutura genética desse germplasma a fim de evitar a identificação de associações falso-positivas entre marcadores e fenótipos de interesse.application/pdfporUniversidade Federal de PelotasPrograma de Pós-Graduação em AgronomiaUFPelBRFaculdade de Agronomia Eliseu MacielPessegueiroGenômicaRecursos genéticosMarcadores SSRVariabilidade genéticaEstrutura populacionalPeachGenomicsGenetic resourcesSSR markersGenetic variabilityPopulation structureCNPQ::CIENCIAS AGRARIAS::AGRONOMIAEstrutura Genética do Germoplasma de Prunus persica (L.) Batsch no BrasilGenetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFPel - Guaiacainstname:Universidade Federal de Pelotas (UFPEL)instacron:UFPELORIGINALdissertacao_liane_thurow.pdfapplication/pdf690839http://guaiaca.ufpel.edu.br/xmlui/bitstream/123456789/1145/1/dissertacao_liane_thurow.pdf6d23772ac7732bb0c45028fd46e4bcf0MD51open accessTEXTdissertacao_liane_thurow.pdf.txtdissertacao_liane_thurow.pdf.txtExtracted Texttext/plain128151http://guaiaca.ufpel.edu.br/xmlui/bitstream/123456789/1145/2/dissertacao_liane_thurow.pdf.txt00d909de863bc1f775693a8a41c242d1MD52open accessTHUMBNAILdissertacao_liane_thurow.pdf.jpgdissertacao_liane_thurow.pdf.jpgGenerated Thumbnailimage/jpeg1379http://guaiaca.ufpel.edu.br/xmlui/bitstream/123456789/1145/3/dissertacao_liane_thurow.pdf.jpge96259cdebd7717130c60dfbe8db8d04MD53open access123456789/11452022-12-22 20:52:01.172open accessoai:guaiaca.ufpel.edu.br:123456789/1145Repositório InstitucionalPUBhttp://repositorio.ufpel.edu.br/oai/requestrippel@ufpel.edu.br || repositorio@ufpel.edu.br || aline.batista@ufpel.edu.bropendoar:2022-12-22T23:52:01Repositório Institucional da UFPel - Guaiaca - Universidade Federal de Pelotas (UFPEL)false
dc.title.por.fl_str_mv Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
dc.title.alternative.eng.fl_str_mv Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil
title Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
spellingShingle Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
Thurow, Liane Bahr
Pessegueiro
Genômica
Recursos genéticos
Marcadores SSR
Variabilidade genética
Estrutura populacional
Peach
Genomics
Genetic resources
SSR markers
Genetic variability
Population structure
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
title_short Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
title_full Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
title_fullStr Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
title_full_unstemmed Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
title_sort Estrutura Genética do Germoplasma de Prunus persica (L.) Batsch no Brasil
author Thurow, Liane Bahr
author_facet Thurow, Liane Bahr
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://lattes.cnpq.br/3675128575984460
dc.contributor.advisorLattes.por.fl_str_mv http://lattes.cnpq.br/6461716944613921
dc.contributor.advisor1.fl_str_mv Castro, Caroline Marques
dc.contributor.author.fl_str_mv Thurow, Liane Bahr
contributor_str_mv Castro, Caroline Marques
dc.subject.por.fl_str_mv Pessegueiro
Genômica
Recursos genéticos
Marcadores SSR
Variabilidade genética
Estrutura populacional
topic Pessegueiro
Genômica
Recursos genéticos
Marcadores SSR
Variabilidade genética
Estrutura populacional
Peach
Genomics
Genetic resources
SSR markers
Genetic variability
Population structure
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
dc.subject.eng.fl_str_mv Peach
Genomics
Genetic resources
SSR markers
Genetic variability
Population structure
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
description Based on the advanced knowledge in genomic, marker-assisted selection shows up as a promising strategy especially to accelerate the development of new cultivars in perennial species, such as peach. In this context, this dissertation addressed the current situation and the prospects of using marker-assisted selection in peach breeding programs as well as to characterize the genetic variability and population structure of an association panel representative of peach germplasm available in Brazil through SSR analysis. Based on a literature review, it was seen that a high number of QTL (Quantitative Trait Loci) is identified in genetic maps of peach, but, despite the importance of the characters studied, the use of markerassisted selection has been incipient by breeding programs. By the other side, with the recent completion of the sequencing of the peach genome, the perspective is that the low use of molecular tools by peach breeding program will change in the coming years. In this trend, the genetic variability present in the association panel representative of peach germplasm in Brazil is quite relevant. On the other hand, this germplasm is structured into two subpopulations according to the fruit flesh type, melting or non-melting, with some genotypes being a mixture of both types of fruit flesh. Greater variability is available in the melting flesh group. These results show that the association panel is suitable for association studies given its relevant genetic variability. However, it should be taken into account in the association studies the genetic structure intrinsic to this germplasm to avoid the identification of false markertrait associations.
publishDate 2013
dc.date.issued.fl_str_mv 2013-10-18
dc.date.accessioned.fl_str_mv 2014-08-20T13:25:38Z
dc.date.available.fl_str_mv 2014-04-07
2014-08-20T13:25:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv THUROW, Liane Bahr. Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil. 2013. 131 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Pelotas, Pelotas, 2013.
dc.identifier.uri.fl_str_mv http://repositorio.ufpel.edu.br/handle/ri/1145
identifier_str_mv THUROW, Liane Bahr. Genetic Structure of the Germplasm of Prunus persica (L.) Batsch in Brazil. 2013. 131 f. Dissertação (Mestrado em Agronomia) - Universidade Federal de Pelotas, Pelotas, 2013.
url http://repositorio.ufpel.edu.br/handle/ri/1145
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dc.publisher.none.fl_str_mv Universidade Federal de Pelotas
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Agronomia
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dc.publisher.country.fl_str_mv BR
dc.publisher.department.fl_str_mv Faculdade de Agronomia Eliseu Maciel
publisher.none.fl_str_mv Universidade Federal de Pelotas
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