A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia

Detalhes bibliográficos
Autor(a) principal: Fagundes, Nelson Jurandi Rosa
Data de Publicação: 2008
Outros Autores: Kanitz, Ricardo, Bonatto, Sandro Luis
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/24138
Resumo: The Americas were the last continents to be populated by humans, and their colonization represents a very interesting chapter in our species’ evolution in which important issues are still contentious or largely unknown. One difficult topic concerns the details of the early peopling of Beringia, such as for how long it was colonized before people moved into the Americas and the demography of this occupation. A recent work using mitochondrial genome (mtDNA) data presented evidence for a so called ‘‘three-stage model’’ consisting of a very early expansion into Beringia followed by ,20,000 years of population stability before the final entry into the Americas. However, these results are in disagreement with other recent studies using similar data and methods. Here, we reanalyze their data to check the robustness of this model and test the ability of Native American mtDNA to discriminate details of the early colonization of Beringia. We apply the Bayesian Skyline Plot approach to recover the past demographic dynamic underpinning these events using different mtDNA data sets. Our results refute the specific details of the ‘‘three-stage model’’, since the early stage of expansion into Beringia followed by a long period of stasis could not be reproduced in any mtDNA data set cleaned from non-Native American haplotypes. Nevertheless, they are consistent with a moderate population bottleneck in Beringia associated with the Last Glacial Maximum followed by a strong population growth around 18,000 years ago as suggested by other recent studies. We suggest that this bottleneck erased the signals of ancient demographic history from recent Native American mtDNA pool, and conclude that the proposed early expansion and occupation of Beringia is an artifact caused by the misincorporation of non-Native American haplotypes.
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spelling Fagundes, Nelson Jurandi RosaKanitz, RicardoBonatto, Sandro Luis2010-06-25T04:18:56Z20081932-6203http://hdl.handle.net/10183/24138000742034The Americas were the last continents to be populated by humans, and their colonization represents a very interesting chapter in our species’ evolution in which important issues are still contentious or largely unknown. One difficult topic concerns the details of the early peopling of Beringia, such as for how long it was colonized before people moved into the Americas and the demography of this occupation. A recent work using mitochondrial genome (mtDNA) data presented evidence for a so called ‘‘three-stage model’’ consisting of a very early expansion into Beringia followed by ,20,000 years of population stability before the final entry into the Americas. However, these results are in disagreement with other recent studies using similar data and methods. Here, we reanalyze their data to check the robustness of this model and test the ability of Native American mtDNA to discriminate details of the early colonization of Beringia. We apply the Bayesian Skyline Plot approach to recover the past demographic dynamic underpinning these events using different mtDNA data sets. Our results refute the specific details of the ‘‘three-stage model’’, since the early stage of expansion into Beringia followed by a long period of stasis could not be reproduced in any mtDNA data set cleaned from non-Native American haplotypes. Nevertheless, they are consistent with a moderate population bottleneck in Beringia associated with the Last Glacial Maximum followed by a strong population growth around 18,000 years ago as suggested by other recent studies. We suggest that this bottleneck erased the signals of ancient demographic history from recent Native American mtDNA pool, and conclude that the proposed early expansion and occupation of Beringia is an artifact caused by the misincorporation of non-Native American haplotypes.application/pdfengPLoS ONE. San Francisco. Vol. 3, no. 9 (Sept. 2008), e3157, 5 p.Evolução humanaDNA mitocondrialA reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of BeringiaEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000742034.pdf000742034.pdfTexto completo (inglês)application/pdf222931http://www.lume.ufrgs.br/bitstream/10183/24138/1/000742034.pdf87420c704155d080626aafa0639f43a1MD51TEXT000742034.pdf.txt000742034.pdf.txtExtracted Texttext/plain28081http://www.lume.ufrgs.br/bitstream/10183/24138/2/000742034.pdf.txt5c5f7b9ae711605dde9f7b79c39eb799MD52THUMBNAIL000742034.pdf.jpg000742034.pdf.jpgGenerated Thumbnailimage/jpeg2073http://www.lume.ufrgs.br/bitstream/10183/24138/3/000742034.pdf.jpg0ea7770738d0d512e6f3e4c70b4a76dfMD5310183/241382023-09-23 03:33:53.72799oai:www.lume.ufrgs.br:10183/24138Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-09-23T06:33:53Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
title A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
spellingShingle A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
Fagundes, Nelson Jurandi Rosa
Evolução humana
DNA mitocondrial
title_short A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
title_full A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
title_fullStr A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
title_full_unstemmed A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
title_sort A reevaluation of the native american MtDNA genome diversity and its bearing on the models of early colonization of Beringia
author Fagundes, Nelson Jurandi Rosa
author_facet Fagundes, Nelson Jurandi Rosa
Kanitz, Ricardo
Bonatto, Sandro Luis
author_role author
author2 Kanitz, Ricardo
Bonatto, Sandro Luis
author2_role author
author
dc.contributor.author.fl_str_mv Fagundes, Nelson Jurandi Rosa
Kanitz, Ricardo
Bonatto, Sandro Luis
dc.subject.por.fl_str_mv Evolução humana
DNA mitocondrial
topic Evolução humana
DNA mitocondrial
description The Americas were the last continents to be populated by humans, and their colonization represents a very interesting chapter in our species’ evolution in which important issues are still contentious or largely unknown. One difficult topic concerns the details of the early peopling of Beringia, such as for how long it was colonized before people moved into the Americas and the demography of this occupation. A recent work using mitochondrial genome (mtDNA) data presented evidence for a so called ‘‘three-stage model’’ consisting of a very early expansion into Beringia followed by ,20,000 years of population stability before the final entry into the Americas. However, these results are in disagreement with other recent studies using similar data and methods. Here, we reanalyze their data to check the robustness of this model and test the ability of Native American mtDNA to discriminate details of the early colonization of Beringia. We apply the Bayesian Skyline Plot approach to recover the past demographic dynamic underpinning these events using different mtDNA data sets. Our results refute the specific details of the ‘‘three-stage model’’, since the early stage of expansion into Beringia followed by a long period of stasis could not be reproduced in any mtDNA data set cleaned from non-Native American haplotypes. Nevertheless, they are consistent with a moderate population bottleneck in Beringia associated with the Last Glacial Maximum followed by a strong population growth around 18,000 years ago as suggested by other recent studies. We suggest that this bottleneck erased the signals of ancient demographic history from recent Native American mtDNA pool, and conclude that the proposed early expansion and occupation of Beringia is an artifact caused by the misincorporation of non-Native American haplotypes.
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dc.relation.ispartof.pt_BR.fl_str_mv PLoS ONE. San Francisco. Vol. 3, no. 9 (Sept. 2008), e3157, 5 p.
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