Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/248365 |
Resumo: | Calibrachoa is a South-American genus comprising 27 species, several considered endemic or rare; few were subjects in genetic studies. We attempted to generate new data about the phylogenetically related and rare species C. eglandulata, C. sendtneriana, C. serrulata, and C. spathulata concerning their genetic diversity and population structure, which, coupled with their known restricted distribution, could help access their conservation status and contribute to the study of the Brazilian biodiversity. We sequenced 88 individuals for plastid intergenic spacers and genotyped 186 individuals for five microsatellite loci. Compared among each other, C. sendtneriana and C. serrulata presented the highest values of genetic diversity [% (sd) = 0.23 (0.14) and 0.43 (0.25), respectively], followed by C. spathulata [% (sd) = 0.19 (0.12)] and C. eglandulata [% (sd) = 0.02 (0.03)]. Population differentiation was evident for these latter species, whereas it was not significant for C. sendtneriana and C. serrulata. Factors such as habitat specificity and fragmentation, pollination syndrome, and life history could explain the observed patterns. Based on the new genetic data and the species’ biology, a conservation status was assigned for C. sendtneriana and the status of the other three species was reviewed. |
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John, Ana Laura de WallauMader, GeraldoFregonezi, Jeferson NunesFreitas, Loreta Brandão de2022-08-31T04:56:47Z20191415-4757http://hdl.handle.net/10183/248365001105142Calibrachoa is a South-American genus comprising 27 species, several considered endemic or rare; few were subjects in genetic studies. We attempted to generate new data about the phylogenetically related and rare species C. eglandulata, C. sendtneriana, C. serrulata, and C. spathulata concerning their genetic diversity and population structure, which, coupled with their known restricted distribution, could help access their conservation status and contribute to the study of the Brazilian biodiversity. We sequenced 88 individuals for plastid intergenic spacers and genotyped 186 individuals for five microsatellite loci. Compared among each other, C. sendtneriana and C. serrulata presented the highest values of genetic diversity [% (sd) = 0.23 (0.14) and 0.43 (0.25), respectively], followed by C. spathulata [% (sd) = 0.19 (0.12)] and C. eglandulata [% (sd) = 0.02 (0.03)]. Population differentiation was evident for these latter species, whereas it was not significant for C. sendtneriana and C. serrulata. Factors such as habitat specificity and fragmentation, pollination syndrome, and life history could explain the observed patterns. Based on the new genetic data and the species’ biology, a conservation status was assigned for C. sendtneriana and the status of the other three species was reviewed.application/pdfengGenetics and molecular biology. Ribeirão Preto. Vol. 42, n. 1 (Mar. 2019), p. 108-119CalibrachoaGenética vegetalDiversidade genéticaMicrossatélitePlastid DNAmicrosatellitesthreatened speciesgrasslandsherbaceous speciesGenetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazilinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001105142.pdf.txt001105142.pdf.txtExtracted Texttext/plain53266http://www.lume.ufrgs.br/bitstream/10183/248365/2/001105142.pdf.txtc5d2fda311ca4cc36c6444d0fee43656MD52ORIGINAL001105142.pdfTexto completo (inglês)application/pdf1058714http://www.lume.ufrgs.br/bitstream/10183/248365/1/001105142.pdfe7336f8d43bf4c3f6165881a6ac057d1MD5110183/2483652022-09-01 05:01:22.649274oai:www.lume.ufrgs.br:10183/248365Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2022-09-01T08:01:22Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
title |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
spellingShingle |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil John, Ana Laura de Wallau Calibrachoa Genética vegetal Diversidade genética Microssatélite Plastid DNA microsatellites threatened species grasslands herbaceous species |
title_short |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
title_full |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
title_fullStr |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
title_full_unstemmed |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
title_sort |
Genetic diversity and population structure of naturally rare Calibrachoa species with small distribution in southern Brazil |
author |
John, Ana Laura de Wallau |
author_facet |
John, Ana Laura de Wallau Mader, Geraldo Fregonezi, Jeferson Nunes Freitas, Loreta Brandão de |
author_role |
author |
author2 |
Mader, Geraldo Fregonezi, Jeferson Nunes Freitas, Loreta Brandão de |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
John, Ana Laura de Wallau Mader, Geraldo Fregonezi, Jeferson Nunes Freitas, Loreta Brandão de |
dc.subject.por.fl_str_mv |
Calibrachoa Genética vegetal Diversidade genética Microssatélite |
topic |
Calibrachoa Genética vegetal Diversidade genética Microssatélite Plastid DNA microsatellites threatened species grasslands herbaceous species |
dc.subject.eng.fl_str_mv |
Plastid DNA microsatellites threatened species grasslands herbaceous species |
description |
Calibrachoa is a South-American genus comprising 27 species, several considered endemic or rare; few were subjects in genetic studies. We attempted to generate new data about the phylogenetically related and rare species C. eglandulata, C. sendtneriana, C. serrulata, and C. spathulata concerning their genetic diversity and population structure, which, coupled with their known restricted distribution, could help access their conservation status and contribute to the study of the Brazilian biodiversity. We sequenced 88 individuals for plastid intergenic spacers and genotyped 186 individuals for five microsatellite loci. Compared among each other, C. sendtneriana and C. serrulata presented the highest values of genetic diversity [% (sd) = 0.23 (0.14) and 0.43 (0.25), respectively], followed by C. spathulata [% (sd) = 0.19 (0.12)] and C. eglandulata [% (sd) = 0.02 (0.03)]. Population differentiation was evident for these latter species, whereas it was not significant for C. sendtneriana and C. serrulata. Factors such as habitat specificity and fragmentation, pollination syndrome, and life history could explain the observed patterns. Based on the new genetic data and the species’ biology, a conservation status was assigned for C. sendtneriana and the status of the other three species was reviewed. |
publishDate |
2019 |
dc.date.issued.fl_str_mv |
2019 |
dc.date.accessioned.fl_str_mv |
2022-08-31T04:56:47Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/other |
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info:eu-repo/semantics/publishedVersion |
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article |
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publishedVersion |
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http://hdl.handle.net/10183/248365 |
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1415-4757 |
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001105142 |
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http://hdl.handle.net/10183/248365 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Genetics and molecular biology. Ribeirão Preto. Vol. 42, n. 1 (Mar. 2019), p. 108-119 |
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info:eu-repo/semantics/openAccess |
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openAccess |
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application/pdf |
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