Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era

Detalhes bibliográficos
Autor(a) principal: Almeida, Gabriel Berg de
Data de Publicação: 2023
Outros Autores: Simon, Lorena Mendes, Bagattini, Ângela Maria, Rosa, Michelle Quarti Machado da, Borges, Marcelo Eduardo, Diniz Filho, José Alexandre Felizola, Kuchenbecker, Ricardo de Souza, Kraenkel, Roberto André, Ferreira, Cláudia Pio, Camey, Suzi Alves, Fortaleza, Carlos Magno Castelo Branco, Toscano, Cristiana Maria
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/271790
Resumo: Brazil was one of the countries most affected during the first year of the COVID-19 pandemic, in a pre-vaccine era, and mathematical and statistical models were used in decisionmaking and public policies to mitigate and suppress SARS-CoV-2 dispersion. In this article, we intend to overview the modeling for COVID-19 in Brazil, focusing on the first 18 months of the pandemic. We conducted a scoping review and searched for studies on infectious disease modeling methods in peer-reviewed journals and gray literature, published between January 01, 2020, and June 2, 2021, reporting real-world or scenario-based COVID-19 modeling for Brazil. We included 81 studies, most corresponding to published articles produced in Brazilian institutions. The models were dynamic and deterministic in the majority. The predominant model type was compartmental, but other models were also found. The main modeling objectives were to analyze epidemiological scenarios (testing interventions’ effectiveness) and to project short and long-term predictions, while few articles performed economic impact analysis. Estimations of the R0 and transmission rates or projections regarding the course of the epidemic figured as major, especially at the beginning of the crisis. However, several other outputs were forecasted, such as the isolation/quarantine effect on transmission, hospital facilities required, secondary cases caused by infected children, and the economic effects of the pandemic. This study reveals numerous articles with shared objectives and similar methods and data sources. We observed a deficiency in addressing social inequities in the Brazilian context within the utilized models, which may also be expected in several low- and middle-income countries with significant social disparities. We conclude that the models were of great relevance in the pandemic scenario of COVID-19. Nevertheless, efforts could be better planned and executed with improved institutional organization, dialogue among research groups, increased interaction between modelers and epidemiologists, and establishment of a sustainable cooperation network.
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spelling Almeida, Gabriel Berg deSimon, Lorena MendesBagattini, Ângela MariaRosa, Michelle Quarti Machado daBorges, Marcelo EduardoDiniz Filho, José Alexandre FelizolaKuchenbecker, Ricardo de SouzaKraenkel, Roberto AndréFerreira, Cláudia PioCamey, Suzi AlvesFortaleza, Carlos Magno Castelo BrancoToscano, Cristiana Maria2024-02-09T05:07:50Z20232767-3375http://hdl.handle.net/10183/271790001193499Brazil was one of the countries most affected during the first year of the COVID-19 pandemic, in a pre-vaccine era, and mathematical and statistical models were used in decisionmaking and public policies to mitigate and suppress SARS-CoV-2 dispersion. In this article, we intend to overview the modeling for COVID-19 in Brazil, focusing on the first 18 months of the pandemic. We conducted a scoping review and searched for studies on infectious disease modeling methods in peer-reviewed journals and gray literature, published between January 01, 2020, and June 2, 2021, reporting real-world or scenario-based COVID-19 modeling for Brazil. We included 81 studies, most corresponding to published articles produced in Brazilian institutions. The models were dynamic and deterministic in the majority. The predominant model type was compartmental, but other models were also found. The main modeling objectives were to analyze epidemiological scenarios (testing interventions’ effectiveness) and to project short and long-term predictions, while few articles performed economic impact analysis. Estimations of the R0 and transmission rates or projections regarding the course of the epidemic figured as major, especially at the beginning of the crisis. However, several other outputs were forecasted, such as the isolation/quarantine effect on transmission, hospital facilities required, secondary cases caused by infected children, and the economic effects of the pandemic. This study reveals numerous articles with shared objectives and similar methods and data sources. We observed a deficiency in addressing social inequities in the Brazilian context within the utilized models, which may also be expected in several low- and middle-income countries with significant social disparities. We conclude that the models were of great relevance in the pandemic scenario of COVID-19. Nevertheless, efforts could be better planned and executed with improved institutional organization, dialogue among research groups, increased interaction between modelers and epidemiologists, and establishment of a sustainable cooperation network.application/pdfengPLOS Global Public Health. San Francisco, CA. Vol. 3, n. 12 (Dec. 2023), e0002679Pandemia de COVID-19 (2020-)Transmissão de doençaVacinaTomada de decisãoDynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine eraEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001193499.pdf.txt001193499.pdf.txtExtracted Texttext/plain94469http://www.lume.ufrgs.br/bitstream/10183/271790/2/001193499.pdf.txt1d4c0f1935bcd3b1950e6b9d53fab739MD52ORIGINAL001193499.pdfTexto completo (inglês)application/pdf1314664http://www.lume.ufrgs.br/bitstream/10183/271790/1/001193499.pdffe4ff12255128d6d27531789edcfcf1fMD5110183/2717902024-02-10 06:08:55.766472oai:www.lume.ufrgs.br:10183/271790Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2024-02-10T08:08:55Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
title Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
spellingShingle Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
Almeida, Gabriel Berg de
Pandemia de COVID-19 (2020-)
Transmissão de doença
Vacina
Tomada de decisão
title_short Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
title_full Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
title_fullStr Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
title_full_unstemmed Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
title_sort Dynamic transmission modeling of COVID-19 to support decision-making in Brazil : a scoping review in the pre-vaccine era
author Almeida, Gabriel Berg de
author_facet Almeida, Gabriel Berg de
Simon, Lorena Mendes
Bagattini, Ângela Maria
Rosa, Michelle Quarti Machado da
Borges, Marcelo Eduardo
Diniz Filho, José Alexandre Felizola
Kuchenbecker, Ricardo de Souza
Kraenkel, Roberto André
Ferreira, Cláudia Pio
Camey, Suzi Alves
Fortaleza, Carlos Magno Castelo Branco
Toscano, Cristiana Maria
author_role author
author2 Simon, Lorena Mendes
Bagattini, Ângela Maria
Rosa, Michelle Quarti Machado da
Borges, Marcelo Eduardo
Diniz Filho, José Alexandre Felizola
Kuchenbecker, Ricardo de Souza
Kraenkel, Roberto André
Ferreira, Cláudia Pio
Camey, Suzi Alves
Fortaleza, Carlos Magno Castelo Branco
Toscano, Cristiana Maria
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Almeida, Gabriel Berg de
Simon, Lorena Mendes
Bagattini, Ângela Maria
Rosa, Michelle Quarti Machado da
Borges, Marcelo Eduardo
Diniz Filho, José Alexandre Felizola
Kuchenbecker, Ricardo de Souza
Kraenkel, Roberto André
Ferreira, Cláudia Pio
Camey, Suzi Alves
Fortaleza, Carlos Magno Castelo Branco
Toscano, Cristiana Maria
dc.subject.por.fl_str_mv Pandemia de COVID-19 (2020-)
Transmissão de doença
Vacina
Tomada de decisão
topic Pandemia de COVID-19 (2020-)
Transmissão de doença
Vacina
Tomada de decisão
description Brazil was one of the countries most affected during the first year of the COVID-19 pandemic, in a pre-vaccine era, and mathematical and statistical models were used in decisionmaking and public policies to mitigate and suppress SARS-CoV-2 dispersion. In this article, we intend to overview the modeling for COVID-19 in Brazil, focusing on the first 18 months of the pandemic. We conducted a scoping review and searched for studies on infectious disease modeling methods in peer-reviewed journals and gray literature, published between January 01, 2020, and June 2, 2021, reporting real-world or scenario-based COVID-19 modeling for Brazil. We included 81 studies, most corresponding to published articles produced in Brazilian institutions. The models were dynamic and deterministic in the majority. The predominant model type was compartmental, but other models were also found. The main modeling objectives were to analyze epidemiological scenarios (testing interventions’ effectiveness) and to project short and long-term predictions, while few articles performed economic impact analysis. Estimations of the R0 and transmission rates or projections regarding the course of the epidemic figured as major, especially at the beginning of the crisis. However, several other outputs were forecasted, such as the isolation/quarantine effect on transmission, hospital facilities required, secondary cases caused by infected children, and the economic effects of the pandemic. This study reveals numerous articles with shared objectives and similar methods and data sources. We observed a deficiency in addressing social inequities in the Brazilian context within the utilized models, which may also be expected in several low- and middle-income countries with significant social disparities. We conclude that the models were of great relevance in the pandemic scenario of COVID-19. Nevertheless, efforts could be better planned and executed with improved institutional organization, dialogue among research groups, increased interaction between modelers and epidemiologists, and establishment of a sustainable cooperation network.
publishDate 2023
dc.date.issued.fl_str_mv 2023
dc.date.accessioned.fl_str_mv 2024-02-09T05:07:50Z
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dc.identifier.issn.pt_BR.fl_str_mv 2767-3375
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv PLOS Global Public Health. San Francisco, CA. Vol. 3, n. 12 (Dec. 2023), e0002679
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