Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development

Detalhes bibliográficos
Autor(a) principal: Morais, Guilherme Loss de
Data de Publicação: 2013
Outros Autores: Zolet, Andreia Carina Turchetto, Etges, Matheus Fragoso, Cagliari, Alexandro, Korbes, Ana Paula, Maraschin, Felipe dos Santos, Margis-Pinheiro, Márcia, Margis, Rogerio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/99260
Resumo: Ribosome-inactivating proteins (RIPs) are enzymes that inhibit protein synthesis after depurination of a specific adenine in rRNA. The RIP family members are classified as type I RIPs that contain an RNA-N-glycosidase domain and type II RIPs that contain a lectin domain (B chain) in addition to the glycosidase domain (A chain). In this work, we identified 30 new plant RIPs and characterized 18 Ricinus communis RIPs. Phylogenetic and functional divergence analyses indicated that the emergence of type I and II RIPs probably occurred before the monocot/eudicot split. We also report the expression profiles of 18 castor bean genes, including those for ricin and agglutinin, in five seed stages as assessed by quantitative PCR. Ricin and agglutinin were the most expressed RIPs in developing seeds although eight other RIPs were also expressed. All of the RIP genes were most highly expressed in the stages in which the endosperm was fully expanded. Although the reason for the large expansion of RIP genes in castor beans remains to be established, the differential expression patterns of the type I and type II members reinforce the existence of biological functions other than defense against predators and herbivory.
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spelling Morais, Guilherme Loss deZolet, Andreia Carina TurchettoEtges, Matheus FragosoCagliari, AlexandroKorbes, Ana PaulaMaraschin, Felipe dos SantosMargis-Pinheiro, MárciaMargis, Rogerio2014-08-08T02:07:02Z20131415-4757http://hdl.handle.net/10183/99260000876417Ribosome-inactivating proteins (RIPs) are enzymes that inhibit protein synthesis after depurination of a specific adenine in rRNA. The RIP family members are classified as type I RIPs that contain an RNA-N-glycosidase domain and type II RIPs that contain a lectin domain (B chain) in addition to the glycosidase domain (A chain). In this work, we identified 30 new plant RIPs and characterized 18 Ricinus communis RIPs. Phylogenetic and functional divergence analyses indicated that the emergence of type I and II RIPs probably occurred before the monocot/eudicot split. We also report the expression profiles of 18 castor bean genes, including those for ricin and agglutinin, in five seed stages as assessed by quantitative PCR. Ricin and agglutinin were the most expressed RIPs in developing seeds although eight other RIPs were also expressed. All of the RIP genes were most highly expressed in the stages in which the endosperm was fully expanded. Although the reason for the large expansion of RIP genes in castor beans remains to be established, the differential expression patterns of the type I and type II members reinforce the existence of biological functions other than defense against predators and herbivory.application/pdfengGenetics and molecular biology. Vol. 36, no. 1 (Mar. 2013), p. 74-86Ricinus communisLipaseRicinaAgglutininEvolutionLipaseRicinus communisRicinRIPsAnalysis of castor bean ribosome-inactivating proteins and their gene expression during seed developmentinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000876417.pdf000876417.pdfTexto completo (inglês)application/pdf3228892http://www.lume.ufrgs.br/bitstream/10183/99260/1/000876417.pdff69952b749fcce591ed19f63718a1e4aMD51TEXT000876417.pdf.txt000876417.pdf.txtExtracted Texttext/plain62087http://www.lume.ufrgs.br/bitstream/10183/99260/2/000876417.pdf.txtc6ffa980e75691d4c5628bad116fb32eMD52THUMBNAIL000876417.pdf.jpg000876417.pdf.jpgGenerated Thumbnailimage/jpeg1884http://www.lume.ufrgs.br/bitstream/10183/99260/3/000876417.pdf.jpg5b99233ad384491f7bf82515b6ee5e54MD5310183/992602023-10-25 03:39:24.055383oai:www.lume.ufrgs.br:10183/99260Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-10-25T06:39:24Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
title Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
spellingShingle Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
Morais, Guilherme Loss de
Ricinus communis
Lipase
Ricina
Agglutinin
Evolution
Lipase
Ricinus communis
Ricin
RIPs
title_short Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
title_full Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
title_fullStr Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
title_full_unstemmed Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
title_sort Analysis of castor bean ribosome-inactivating proteins and their gene expression during seed development
author Morais, Guilherme Loss de
author_facet Morais, Guilherme Loss de
Zolet, Andreia Carina Turchetto
Etges, Matheus Fragoso
Cagliari, Alexandro
Korbes, Ana Paula
Maraschin, Felipe dos Santos
Margis-Pinheiro, Márcia
Margis, Rogerio
author_role author
author2 Zolet, Andreia Carina Turchetto
Etges, Matheus Fragoso
Cagliari, Alexandro
Korbes, Ana Paula
Maraschin, Felipe dos Santos
Margis-Pinheiro, Márcia
Margis, Rogerio
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Morais, Guilherme Loss de
Zolet, Andreia Carina Turchetto
Etges, Matheus Fragoso
Cagliari, Alexandro
Korbes, Ana Paula
Maraschin, Felipe dos Santos
Margis-Pinheiro, Márcia
Margis, Rogerio
dc.subject.por.fl_str_mv Ricinus communis
Lipase
Ricina
topic Ricinus communis
Lipase
Ricina
Agglutinin
Evolution
Lipase
Ricinus communis
Ricin
RIPs
dc.subject.eng.fl_str_mv Agglutinin
Evolution
Lipase
Ricinus communis
Ricin
RIPs
description Ribosome-inactivating proteins (RIPs) are enzymes that inhibit protein synthesis after depurination of a specific adenine in rRNA. The RIP family members are classified as type I RIPs that contain an RNA-N-glycosidase domain and type II RIPs that contain a lectin domain (B chain) in addition to the glycosidase domain (A chain). In this work, we identified 30 new plant RIPs and characterized 18 Ricinus communis RIPs. Phylogenetic and functional divergence analyses indicated that the emergence of type I and II RIPs probably occurred before the monocot/eudicot split. We also report the expression profiles of 18 castor bean genes, including those for ricin and agglutinin, in five seed stages as assessed by quantitative PCR. Ricin and agglutinin were the most expressed RIPs in developing seeds although eight other RIPs were also expressed. All of the RIP genes were most highly expressed in the stages in which the endosperm was fully expanded. Although the reason for the large expansion of RIP genes in castor beans remains to be established, the differential expression patterns of the type I and type II members reinforce the existence of biological functions other than defense against predators and herbivory.
publishDate 2013
dc.date.issued.fl_str_mv 2013
dc.date.accessioned.fl_str_mv 2014-08-08T02:07:02Z
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10183/99260
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Genetics and molecular biology. Vol. 36, no. 1 (Mar. 2013), p. 74-86
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eu_rights_str_mv openAccess
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