Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae

Detalhes bibliográficos
Autor(a) principal: Junges, Angela
Data de Publicação: 2014
Outros Autores: Boldo, Juliano Tomazzoni, Souza, Bárbara Kunzler, Guedes, Rafael Lucas Muniz, Oliveira, Nicolau Sbaraini, Silva, Lívia Kmetzsch Rosa e, Thompson, Claudia Elizabeth, Staats, Charley Christian, Almeida, Luis Gonzaga de Paula, Vasconcelos, Ana Tereza Ribeiro de, Vainstein, Marilene Henning, Schrank, Augusto
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/225440
Resumo: Fungal chitin metabolism involves diverse processes such as metabolically active cell wall maintenance, basic nutrition, and different aspects of virulence. Chitinases are enzymes belonging to the glycoside hydrolase family 18 (GH18) and 19 (GH19) and are responsible for the hydrolysis of b-1,4-linkages in chitin. This linear homopolymer of N-acetyl-b-D-glucosamine is an essential constituent of fungal cell walls and arthropod exoskeletons. Several chitinases have been directly implicated in structural, morphogenetic, autolytic and nutritional activities of fungal cells. In the entomopathogen Metarhizium anisopliae, chitinases are also involved in virulence. Filamentous fungi genomes exhibit a higher number of chitinase-coding genes than bacteria or yeasts. The survey performed in the M. anisopliae genome has successfully identified 24 genes belonging to glycoside hydrolase family 18, including three previously experimentally determined chitinase-coding genes named chit1, chi2 and chi3. These putative chitinases were classified based on domain organization and phylogenetic analysis into the previously described A, B and C chitinase subgroups, and into a new subgroup D. Moreover, three GH18 proteins could be classified as putative endo-N-acetyl-b-D-glucosaminidases, enzymes that are associated with deglycosylation and were therefore assigned to a new subgroup E. The transcriptional profile of the GH18 genes was evaluated by qPCR with RNA extracted from eight culture conditions, representing different stages of development or different nutritional states. The transcripts from the GH18 genes were detected in at least one of the different M. anisopliae developmental stages, thus validating the proposed genes. Moreover, not all members from the same chitinase subgroup presented equal patterns of transcript expression under the eight distinct conditions studied. The determination of M. anisopliae chitinases and ENGases and a more detailed study concerning the enzymes’ roles in morphological or nutritional functions will allow comprehensive insights into the chitinolytic potential of this highly infective entomopathogenic fungus.
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spelling Junges, AngelaBoldo, Juliano TomazzoniSouza, Bárbara KunzlerGuedes, Rafael Lucas MunizOliveira, Nicolau SbarainiSilva, Lívia Kmetzsch Rosa eThompson, Claudia ElizabethStaats, Charley ChristianAlmeida, Luis Gonzaga de PaulaVasconcelos, Ana Tereza Ribeiro deVainstein, Marilene HenningSchrank, Augusto2021-08-10T04:31:56Z20141932-6203http://hdl.handle.net/10183/225440000994761Fungal chitin metabolism involves diverse processes such as metabolically active cell wall maintenance, basic nutrition, and different aspects of virulence. Chitinases are enzymes belonging to the glycoside hydrolase family 18 (GH18) and 19 (GH19) and are responsible for the hydrolysis of b-1,4-linkages in chitin. This linear homopolymer of N-acetyl-b-D-glucosamine is an essential constituent of fungal cell walls and arthropod exoskeletons. Several chitinases have been directly implicated in structural, morphogenetic, autolytic and nutritional activities of fungal cells. In the entomopathogen Metarhizium anisopliae, chitinases are also involved in virulence. Filamentous fungi genomes exhibit a higher number of chitinase-coding genes than bacteria or yeasts. The survey performed in the M. anisopliae genome has successfully identified 24 genes belonging to glycoside hydrolase family 18, including three previously experimentally determined chitinase-coding genes named chit1, chi2 and chi3. These putative chitinases were classified based on domain organization and phylogenetic analysis into the previously described A, B and C chitinase subgroups, and into a new subgroup D. Moreover, three GH18 proteins could be classified as putative endo-N-acetyl-b-D-glucosaminidases, enzymes that are associated with deglycosylation and were therefore assigned to a new subgroup E. The transcriptional profile of the GH18 genes was evaluated by qPCR with RNA extracted from eight culture conditions, representing different stages of development or different nutritional states. The transcripts from the GH18 genes were detected in at least one of the different M. anisopliae developmental stages, thus validating the proposed genes. Moreover, not all members from the same chitinase subgroup presented equal patterns of transcript expression under the eight distinct conditions studied. The determination of M. anisopliae chitinases and ENGases and a more detailed study concerning the enzymes’ roles in morphological or nutritional functions will allow comprehensive insights into the chitinolytic potential of this highly infective entomopathogenic fungus.application/pdfengPLoS ONE. San Francisco. Vol. 9, no. 9 (Sept. 2014), e107864, 16 p.Metarhizium anisopliae : Fungo entomopatogenicoHidrolasesGenomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliaeEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000994761.pdf.txt000994761.pdf.txtExtracted Texttext/plain83943http://www.lume.ufrgs.br/bitstream/10183/225440/2/000994761.pdf.txtb29b73fea537c8e654c2c3f57e6abcb1MD52ORIGINAL000994761.pdfTexto completo (inglês)application/pdf4237469http://www.lume.ufrgs.br/bitstream/10183/225440/1/000994761.pdf81e36cb1b24aabe615efb128850346baMD5110183/2254402023-09-24 03:39:14.831961oai:www.lume.ufrgs.br:10183/225440Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2023-09-24T06:39:14Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
title Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
spellingShingle Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
Junges, Angela
Metarhizium anisopliae : Fungo entomopatogenico
Hidrolases
title_short Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
title_full Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
title_fullStr Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
title_full_unstemmed Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
title_sort Genomic analyses and transcriptional profiles of the glycoside hydrolase family 18 genes of the entomopathogenic fungus Metarhizium anisopliae
author Junges, Angela
author_facet Junges, Angela
Boldo, Juliano Tomazzoni
Souza, Bárbara Kunzler
Guedes, Rafael Lucas Muniz
Oliveira, Nicolau Sbaraini
Silva, Lívia Kmetzsch Rosa e
Thompson, Claudia Elizabeth
Staats, Charley Christian
Almeida, Luis Gonzaga de Paula
Vasconcelos, Ana Tereza Ribeiro de
Vainstein, Marilene Henning
Schrank, Augusto
author_role author
author2 Boldo, Juliano Tomazzoni
Souza, Bárbara Kunzler
Guedes, Rafael Lucas Muniz
Oliveira, Nicolau Sbaraini
Silva, Lívia Kmetzsch Rosa e
Thompson, Claudia Elizabeth
Staats, Charley Christian
Almeida, Luis Gonzaga de Paula
Vasconcelos, Ana Tereza Ribeiro de
Vainstein, Marilene Henning
Schrank, Augusto
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Junges, Angela
Boldo, Juliano Tomazzoni
Souza, Bárbara Kunzler
Guedes, Rafael Lucas Muniz
Oliveira, Nicolau Sbaraini
Silva, Lívia Kmetzsch Rosa e
Thompson, Claudia Elizabeth
Staats, Charley Christian
Almeida, Luis Gonzaga de Paula
Vasconcelos, Ana Tereza Ribeiro de
Vainstein, Marilene Henning
Schrank, Augusto
dc.subject.por.fl_str_mv Metarhizium anisopliae : Fungo entomopatogenico
Hidrolases
topic Metarhizium anisopliae : Fungo entomopatogenico
Hidrolases
description Fungal chitin metabolism involves diverse processes such as metabolically active cell wall maintenance, basic nutrition, and different aspects of virulence. Chitinases are enzymes belonging to the glycoside hydrolase family 18 (GH18) and 19 (GH19) and are responsible for the hydrolysis of b-1,4-linkages in chitin. This linear homopolymer of N-acetyl-b-D-glucosamine is an essential constituent of fungal cell walls and arthropod exoskeletons. Several chitinases have been directly implicated in structural, morphogenetic, autolytic and nutritional activities of fungal cells. In the entomopathogen Metarhizium anisopliae, chitinases are also involved in virulence. Filamentous fungi genomes exhibit a higher number of chitinase-coding genes than bacteria or yeasts. The survey performed in the M. anisopliae genome has successfully identified 24 genes belonging to glycoside hydrolase family 18, including three previously experimentally determined chitinase-coding genes named chit1, chi2 and chi3. These putative chitinases were classified based on domain organization and phylogenetic analysis into the previously described A, B and C chitinase subgroups, and into a new subgroup D. Moreover, three GH18 proteins could be classified as putative endo-N-acetyl-b-D-glucosaminidases, enzymes that are associated with deglycosylation and were therefore assigned to a new subgroup E. The transcriptional profile of the GH18 genes was evaluated by qPCR with RNA extracted from eight culture conditions, representing different stages of development or different nutritional states. The transcripts from the GH18 genes were detected in at least one of the different M. anisopliae developmental stages, thus validating the proposed genes. Moreover, not all members from the same chitinase subgroup presented equal patterns of transcript expression under the eight distinct conditions studied. The determination of M. anisopliae chitinases and ENGases and a more detailed study concerning the enzymes’ roles in morphological or nutritional functions will allow comprehensive insights into the chitinolytic potential of this highly infective entomopathogenic fungus.
publishDate 2014
dc.date.issued.fl_str_mv 2014
dc.date.accessioned.fl_str_mv 2021-08-10T04:31:56Z
dc.type.driver.fl_str_mv Estrangeiro
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10183/225440
dc.identifier.issn.pt_BR.fl_str_mv 1932-6203
dc.identifier.nrb.pt_BR.fl_str_mv 000994761
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url http://hdl.handle.net/10183/225440
dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv PLoS ONE. San Francisco. Vol. 9, no. 9 (Sept. 2014), e107864, 16 p.
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