Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)

Detalhes bibliográficos
Autor(a) principal: Kretschmer, Rafael
Data de Publicação: 2018
Outros Autores: Oliveira, Thays Duarte de, Furo, Ivanete de Oliveira, Silva, Fabio Augusto Oliveira, Gunski, Ricardo José, Garnero, Analía del Valle, Cioffi, Marcelo de Bello, Oliveira, Edivaldo Herculano Corrêa, Freitas, Thales Renato Ochotorena de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/267843
Resumo: An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species.
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spelling Kretschmer, RafaelOliveira, Thays Duarte deFuro, Ivanete de OliveiraSilva, Fabio Augusto OliveiraGunski, Ricardo JoséGarnero, Analía del ValleCioffi, Marcelo de BelloOliveira, Edivaldo Herculano CorrêaFreitas, Thales Renato Ochotorena de2023-11-30T03:24:23Z20181415-4757http://hdl.handle.net/10183/267843001103402An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species.application/pdfengGenetics and molecular biology. Ribeirão Preto. Vol. 41, no. 1 (Marc. 2018), p. 98-106DNAColumbidaeCromossomos sexuaisHibridização in situ fluorescenteBirdsMicrosatellitesSex chromosomesChromosomal rearrangements.Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)info:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001103402.pdf.txt001103402.pdf.txtExtracted Texttext/plain37087http://www.lume.ufrgs.br/bitstream/10183/267843/2/001103402.pdf.txt1453fe689c2fc2475262d7cfed6081a5MD52ORIGINAL001103402.pdfTexto completo (inglês)application/pdf1549039http://www.lume.ufrgs.br/bitstream/10183/267843/1/001103402.pdfa5fa7d0ac296ea2ab971077f080eb365MD5110183/2678432024-05-23 06:43:24.759833oai:www.lume.ufrgs.br:10183/267843Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2024-05-23T09:43:24Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
spellingShingle Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
Kretschmer, Rafael
DNA
Columbidae
Cromossomos sexuais
Hibridização in situ fluorescente
Birds
Microsatellites
Sex chromosomes
Chromosomal rearrangements.
title_short Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_full Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_fullStr Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_full_unstemmed Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
title_sort Repetitive DNAs and shrink genomes: a chromosomal analysis in nine Columbidae species (Aves, Columbiformes)
author Kretschmer, Rafael
author_facet Kretschmer, Rafael
Oliveira, Thays Duarte de
Furo, Ivanete de Oliveira
Silva, Fabio Augusto Oliveira
Gunski, Ricardo José
Garnero, Analía del Valle
Cioffi, Marcelo de Bello
Oliveira, Edivaldo Herculano Corrêa
Freitas, Thales Renato Ochotorena de
author_role author
author2 Oliveira, Thays Duarte de
Furo, Ivanete de Oliveira
Silva, Fabio Augusto Oliveira
Gunski, Ricardo José
Garnero, Analía del Valle
Cioffi, Marcelo de Bello
Oliveira, Edivaldo Herculano Corrêa
Freitas, Thales Renato Ochotorena de
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Kretschmer, Rafael
Oliveira, Thays Duarte de
Furo, Ivanete de Oliveira
Silva, Fabio Augusto Oliveira
Gunski, Ricardo José
Garnero, Analía del Valle
Cioffi, Marcelo de Bello
Oliveira, Edivaldo Herculano Corrêa
Freitas, Thales Renato Ochotorena de
dc.subject.por.fl_str_mv DNA
Columbidae
Cromossomos sexuais
Hibridização in situ fluorescente
topic DNA
Columbidae
Cromossomos sexuais
Hibridização in situ fluorescente
Birds
Microsatellites
Sex chromosomes
Chromosomal rearrangements.
dc.subject.eng.fl_str_mv Birds
Microsatellites
Sex chromosomes
Chromosomal rearrangements.
description An extensive karyotype variation is found among species belonging to the Columbidae family of birds (Columbiformes), both in diploid number and chromosomal morphology. Although clusters of repetitive DNA sequences play an important role in chromosomal instability, and therefore in chromosomal rearrangements, little is known about their distribution and amount in avian genomes. The aim of this study was to analyze the distribution of 11 distinct microsatellite sequences, as well as clusters of 18S rDNA, in nine different Columbidae species, correlating their distribution with the occurrence of chromosomal rearrangements. We found 2n values ranging from 76 to 86 and nine out of 11 microsatellite sequences showed distinct hybridization signals among the analyzed species. The accumulation of microsatellite repeats was found preferentially in the centromeric region of macro and microchromosomes, and in the W chromosome. Additionally, pair 2 showed the accumulation of several microsatellites in different combinations and locations in the distinct species, suggesting the occurrence of intrachromosomal rearrangements, as well as a possible fission of this pair in Geotrygon species. Therefore, although birds have a smaller amount of repetitive sequences when compared to other Tetrapoda, these seem to play an important role in the karyotype evolution of these species.
publishDate 2018
dc.date.issued.fl_str_mv 2018
dc.date.accessioned.fl_str_mv 2023-11-30T03:24:23Z
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Genetics and molecular biology. Ribeirão Preto. Vol. 41, no. 1 (Marc. 2018), p. 98-106
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