Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
Autor(a) principal: | |
---|---|
Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRGS |
Texto Completo: | http://hdl.handle.net/10183/250302 |
Resumo: | Aging is associated with adipose tissue dysfunction and is recognized as a risk factor for shortened life span. Considering that in vitro findings have shown the involvement of microRNA in extracellular vesicles and particles (EVPs) on senescence, we hypothesized that circulating EVPs derived from adipocytes can be involved in the aging process via their microRNA cargo. We aimed to determine the microRNA profiles of circulating EVPs derived from adipocytes (FABP4+) from aged and young adult animals and to perform in silico prediction of their downstream signaling effects. Plasma was obtained from Wistar rats (3 and 21 months old), and adipocyte-derived EVPs were isolated using the commercially available kit. Fatty acid-binding protein 4 (FABP4) was used for adipocyte-derived EVPs isolation; microRNA isolation and microarray expression analysis were performed. The analysis revealed 728 miRNAs, 32 were differentially between groups (p < 0.05; fold change ≥ |1.1|), of which 15 miRNAs were upregulated and 17 were downregulated in circulating EVPs from aged animals compared to young adults. A conservative filter was applied, and 18 microRNAs had experimentally validated and highly conserved predicted mRNA targets, with a total of 2,228 mRNAs. Canonical pathways, disease and functions, and upstream regulator analyses were performed using IPA-QIAGEN, allowing a global and interconnected evaluation. IPA categories impacted negatively were cell cycle, cellular development, cellular growth and proliferation, and tissue development, while those impacted positively were “digestive system cancer” and “endocrine gland tumor.” Interestingly, the upregulated miR-15-5p targets several cyclins, such as CCND1 and CCND2, and miR-24-3p seems to target CDK4 (cyclin-dependent kinase 4); then potentially inhibiting their expression, both miRNAs can induce a negative regulation of cell cycle progression. In contrast, silencing of negative cell cycle checkpoint regulators, such as p21 and p16, can be predicted, which can induce impairment in response to genotoxic stressors. In addition, predicted targets, such as SMAD family members, seem to be involved in the positive control of digestive and endocrine tumors. Taken together, this exploratory study indicates that miRNA signature in circulating adipocyte-derived EVPs may be involved with the double-edged sword of cellular senescence, including irreversible proliferation arrest and tissue-dependent cancer, and seems to be suitable for further validation and confirmatory studies. |
id |
UFRGS-2_a9d23ca793432a5a2bb053fa101c2f9e |
---|---|
oai_identifier_str |
oai:www.lume.ufrgs.br:10183/250302 |
network_acronym_str |
UFRGS-2 |
network_name_str |
Repositório Institucional da UFRGS |
repository_id_str |
|
spelling |
Siqueira, Ionara RodriguesRodrigues, Andressa de SouzaFlores, Marina SiqueiraCunha, Eduarda Letícia VieiraGoldberg, M.Harmon, B.Batabyal, RachaelFreishtat, R.Cechinel, Laura Reck2022-10-26T04:47:10Z20222673-6217http://hdl.handle.net/10183/250302001149277Aging is associated with adipose tissue dysfunction and is recognized as a risk factor for shortened life span. Considering that in vitro findings have shown the involvement of microRNA in extracellular vesicles and particles (EVPs) on senescence, we hypothesized that circulating EVPs derived from adipocytes can be involved in the aging process via their microRNA cargo. We aimed to determine the microRNA profiles of circulating EVPs derived from adipocytes (FABP4+) from aged and young adult animals and to perform in silico prediction of their downstream signaling effects. Plasma was obtained from Wistar rats (3 and 21 months old), and adipocyte-derived EVPs were isolated using the commercially available kit. Fatty acid-binding protein 4 (FABP4) was used for adipocyte-derived EVPs isolation; microRNA isolation and microarray expression analysis were performed. The analysis revealed 728 miRNAs, 32 were differentially between groups (p < 0.05; fold change ≥ |1.1|), of which 15 miRNAs were upregulated and 17 were downregulated in circulating EVPs from aged animals compared to young adults. A conservative filter was applied, and 18 microRNAs had experimentally validated and highly conserved predicted mRNA targets, with a total of 2,228 mRNAs. Canonical pathways, disease and functions, and upstream regulator analyses were performed using IPA-QIAGEN, allowing a global and interconnected evaluation. IPA categories impacted negatively were cell cycle, cellular development, cellular growth and proliferation, and tissue development, while those impacted positively were “digestive system cancer” and “endocrine gland tumor.” Interestingly, the upregulated miR-15-5p targets several cyclins, such as CCND1 and CCND2, and miR-24-3p seems to target CDK4 (cyclin-dependent kinase 4); then potentially inhibiting their expression, both miRNAs can induce a negative regulation of cell cycle progression. In contrast, silencing of negative cell cycle checkpoint regulators, such as p21 and p16, can be predicted, which can induce impairment in response to genotoxic stressors. In addition, predicted targets, such as SMAD family members, seem to be involved in the positive control of digestive and endocrine tumors. Taken together, this exploratory study indicates that miRNA signature in circulating adipocyte-derived EVPs may be involved with the double-edged sword of cellular senescence, including irreversible proliferation arrest and tissue-dependent cancer, and seems to be suitable for further validation and confirmatory studies.application/pdfengFrontiers in aging. Lausanne. Vol. 3 (Aug. 2022), 867100, 19 p.Vesículas extracelularesAdipócitosSenescência celularEnvelhecimentoMicroRNAsTecido adiposoAdipocyte-derived exosomesMicroRNACellular senescenceAgingObesityAdipose tissue dysfunctionsTumorsCell cycleCirculating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescenceEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001149277.pdf.txt001149277.pdf.txtExtracted Texttext/plain94023http://www.lume.ufrgs.br/bitstream/10183/250302/2/001149277.pdf.txtff03ece142c0a9ff21c2924643378e33MD52ORIGINAL001149277.pdfTexto completo (inglês)application/pdf3557300http://www.lume.ufrgs.br/bitstream/10183/250302/1/001149277.pdf681e2bd1c4c81d0c13bfbc1980a06e9bMD5110183/2503022022-10-27 04:50:11.702222oai:www.lume.ufrgs.br:10183/250302Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2022-10-27T07:50:11Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false |
dc.title.pt_BR.fl_str_mv |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
title |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
spellingShingle |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence Siqueira, Ionara Rodrigues Vesículas extracelulares Adipócitos Senescência celular Envelhecimento MicroRNAs Tecido adiposo Adipocyte-derived exosomes MicroRNA Cellular senescence Aging Obesity Adipose tissue dysfunctions Tumors Cell cycle |
title_short |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
title_full |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
title_fullStr |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
title_full_unstemmed |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
title_sort |
Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence |
author |
Siqueira, Ionara Rodrigues |
author_facet |
Siqueira, Ionara Rodrigues Rodrigues, Andressa de Souza Flores, Marina Siqueira Cunha, Eduarda Letícia Vieira Goldberg, M. Harmon, B. Batabyal, Rachael Freishtat, R. Cechinel, Laura Reck |
author_role |
author |
author2 |
Rodrigues, Andressa de Souza Flores, Marina Siqueira Cunha, Eduarda Letícia Vieira Goldberg, M. Harmon, B. Batabyal, Rachael Freishtat, R. Cechinel, Laura Reck |
author2_role |
author author author author author author author author |
dc.contributor.author.fl_str_mv |
Siqueira, Ionara Rodrigues Rodrigues, Andressa de Souza Flores, Marina Siqueira Cunha, Eduarda Letícia Vieira Goldberg, M. Harmon, B. Batabyal, Rachael Freishtat, R. Cechinel, Laura Reck |
dc.subject.por.fl_str_mv |
Vesículas extracelulares Adipócitos Senescência celular Envelhecimento MicroRNAs Tecido adiposo |
topic |
Vesículas extracelulares Adipócitos Senescência celular Envelhecimento MicroRNAs Tecido adiposo Adipocyte-derived exosomes MicroRNA Cellular senescence Aging Obesity Adipose tissue dysfunctions Tumors Cell cycle |
dc.subject.eng.fl_str_mv |
Adipocyte-derived exosomes MicroRNA Cellular senescence Aging Obesity Adipose tissue dysfunctions Tumors Cell cycle |
description |
Aging is associated with adipose tissue dysfunction and is recognized as a risk factor for shortened life span. Considering that in vitro findings have shown the involvement of microRNA in extracellular vesicles and particles (EVPs) on senescence, we hypothesized that circulating EVPs derived from adipocytes can be involved in the aging process via their microRNA cargo. We aimed to determine the microRNA profiles of circulating EVPs derived from adipocytes (FABP4+) from aged and young adult animals and to perform in silico prediction of their downstream signaling effects. Plasma was obtained from Wistar rats (3 and 21 months old), and adipocyte-derived EVPs were isolated using the commercially available kit. Fatty acid-binding protein 4 (FABP4) was used for adipocyte-derived EVPs isolation; microRNA isolation and microarray expression analysis were performed. The analysis revealed 728 miRNAs, 32 were differentially between groups (p < 0.05; fold change ≥ |1.1|), of which 15 miRNAs were upregulated and 17 were downregulated in circulating EVPs from aged animals compared to young adults. A conservative filter was applied, and 18 microRNAs had experimentally validated and highly conserved predicted mRNA targets, with a total of 2,228 mRNAs. Canonical pathways, disease and functions, and upstream regulator analyses were performed using IPA-QIAGEN, allowing a global and interconnected evaluation. IPA categories impacted negatively were cell cycle, cellular development, cellular growth and proliferation, and tissue development, while those impacted positively were “digestive system cancer” and “endocrine gland tumor.” Interestingly, the upregulated miR-15-5p targets several cyclins, such as CCND1 and CCND2, and miR-24-3p seems to target CDK4 (cyclin-dependent kinase 4); then potentially inhibiting their expression, both miRNAs can induce a negative regulation of cell cycle progression. In contrast, silencing of negative cell cycle checkpoint regulators, such as p21 and p16, can be predicted, which can induce impairment in response to genotoxic stressors. In addition, predicted targets, such as SMAD family members, seem to be involved in the positive control of digestive and endocrine tumors. Taken together, this exploratory study indicates that miRNA signature in circulating adipocyte-derived EVPs may be involved with the double-edged sword of cellular senescence, including irreversible proliferation arrest and tissue-dependent cancer, and seems to be suitable for further validation and confirmatory studies. |
publishDate |
2022 |
dc.date.accessioned.fl_str_mv |
2022-10-26T04:47:10Z |
dc.date.issued.fl_str_mv |
2022 |
dc.type.driver.fl_str_mv |
Estrangeiro info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10183/250302 |
dc.identifier.issn.pt_BR.fl_str_mv |
2673-6217 |
dc.identifier.nrb.pt_BR.fl_str_mv |
001149277 |
identifier_str_mv |
2673-6217 001149277 |
url |
http://hdl.handle.net/10183/250302 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Frontiers in aging. Lausanne. Vol. 3 (Aug. 2022), 867100, 19 p. |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UFRGS instname:Universidade Federal do Rio Grande do Sul (UFRGS) instacron:UFRGS |
instname_str |
Universidade Federal do Rio Grande do Sul (UFRGS) |
instacron_str |
UFRGS |
institution |
UFRGS |
reponame_str |
Repositório Institucional da UFRGS |
collection |
Repositório Institucional da UFRGS |
bitstream.url.fl_str_mv |
http://www.lume.ufrgs.br/bitstream/10183/250302/2/001149277.pdf.txt http://www.lume.ufrgs.br/bitstream/10183/250302/1/001149277.pdf |
bitstream.checksum.fl_str_mv |
ff03ece142c0a9ff21c2924643378e33 681e2bd1c4c81d0c13bfbc1980a06e9b |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS) |
repository.mail.fl_str_mv |
|
_version_ |
1815447809583742976 |