Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence

Detalhes bibliográficos
Autor(a) principal: Siqueira, Ionara Rodrigues
Data de Publicação: 2022
Outros Autores: Rodrigues, Andressa de Souza, Flores, Marina Siqueira, Cunha, Eduarda Letícia Vieira, Goldberg, M., Harmon, B., Batabyal, Rachael, Freishtat, R., Cechinel, Laura Reck
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/250302
Resumo: Aging is associated with adipose tissue dysfunction and is recognized as a risk factor for shortened life span. Considering that in vitro findings have shown the involvement of microRNA in extracellular vesicles and particles (EVPs) on senescence, we hypothesized that circulating EVPs derived from adipocytes can be involved in the aging process via their microRNA cargo. We aimed to determine the microRNA profiles of circulating EVPs derived from adipocytes (FABP4+) from aged and young adult animals and to perform in silico prediction of their downstream signaling effects. Plasma was obtained from Wistar rats (3 and 21 months old), and adipocyte-derived EVPs were isolated using the commercially available kit. Fatty acid-binding protein 4 (FABP4) was used for adipocyte-derived EVPs isolation; microRNA isolation and microarray expression analysis were performed. The analysis revealed 728 miRNAs, 32 were differentially between groups (p < 0.05; fold change ≥ |1.1|), of which 15 miRNAs were upregulated and 17 were downregulated in circulating EVPs from aged animals compared to young adults. A conservative filter was applied, and 18 microRNAs had experimentally validated and highly conserved predicted mRNA targets, with a total of 2,228 mRNAs. Canonical pathways, disease and functions, and upstream regulator analyses were performed using IPA-QIAGEN, allowing a global and interconnected evaluation. IPA categories impacted negatively were cell cycle, cellular development, cellular growth and proliferation, and tissue development, while those impacted positively were “digestive system cancer” and “endocrine gland tumor.” Interestingly, the upregulated miR-15-5p targets several cyclins, such as CCND1 and CCND2, and miR-24-3p seems to target CDK4 (cyclin-dependent kinase 4); then potentially inhibiting their expression, both miRNAs can induce a negative regulation of cell cycle progression. In contrast, silencing of negative cell cycle checkpoint regulators, such as p21 and p16, can be predicted, which can induce impairment in response to genotoxic stressors. In addition, predicted targets, such as SMAD family members, seem to be involved in the positive control of digestive and endocrine tumors. Taken together, this exploratory study indicates that miRNA signature in circulating adipocyte-derived EVPs may be involved with the double-edged sword of cellular senescence, including irreversible proliferation arrest and tissue-dependent cancer, and seems to be suitable for further validation and confirmatory studies.
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spelling Siqueira, Ionara RodriguesRodrigues, Andressa de SouzaFlores, Marina SiqueiraCunha, Eduarda Letícia VieiraGoldberg, M.Harmon, B.Batabyal, RachaelFreishtat, R.Cechinel, Laura Reck2022-10-26T04:47:10Z20222673-6217http://hdl.handle.net/10183/250302001149277Aging is associated with adipose tissue dysfunction and is recognized as a risk factor for shortened life span. Considering that in vitro findings have shown the involvement of microRNA in extracellular vesicles and particles (EVPs) on senescence, we hypothesized that circulating EVPs derived from adipocytes can be involved in the aging process via their microRNA cargo. We aimed to determine the microRNA profiles of circulating EVPs derived from adipocytes (FABP4+) from aged and young adult animals and to perform in silico prediction of their downstream signaling effects. Plasma was obtained from Wistar rats (3 and 21 months old), and adipocyte-derived EVPs were isolated using the commercially available kit. Fatty acid-binding protein 4 (FABP4) was used for adipocyte-derived EVPs isolation; microRNA isolation and microarray expression analysis were performed. The analysis revealed 728 miRNAs, 32 were differentially between groups (p < 0.05; fold change ≥ |1.1|), of which 15 miRNAs were upregulated and 17 were downregulated in circulating EVPs from aged animals compared to young adults. A conservative filter was applied, and 18 microRNAs had experimentally validated and highly conserved predicted mRNA targets, with a total of 2,228 mRNAs. Canonical pathways, disease and functions, and upstream regulator analyses were performed using IPA-QIAGEN, allowing a global and interconnected evaluation. IPA categories impacted negatively were cell cycle, cellular development, cellular growth and proliferation, and tissue development, while those impacted positively were “digestive system cancer” and “endocrine gland tumor.” Interestingly, the upregulated miR-15-5p targets several cyclins, such as CCND1 and CCND2, and miR-24-3p seems to target CDK4 (cyclin-dependent kinase 4); then potentially inhibiting their expression, both miRNAs can induce a negative regulation of cell cycle progression. In contrast, silencing of negative cell cycle checkpoint regulators, such as p21 and p16, can be predicted, which can induce impairment in response to genotoxic stressors. In addition, predicted targets, such as SMAD family members, seem to be involved in the positive control of digestive and endocrine tumors. Taken together, this exploratory study indicates that miRNA signature in circulating adipocyte-derived EVPs may be involved with the double-edged sword of cellular senescence, including irreversible proliferation arrest and tissue-dependent cancer, and seems to be suitable for further validation and confirmatory studies.application/pdfengFrontiers in aging. Lausanne. Vol. 3 (Aug. 2022), 867100, 19 p.Vesículas extracelularesAdipócitosSenescência celularEnvelhecimentoMicroRNAsTecido adiposoAdipocyte-derived exosomesMicroRNACellular senescenceAgingObesityAdipose tissue dysfunctionsTumorsCell cycleCirculating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescenceEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001149277.pdf.txt001149277.pdf.txtExtracted Texttext/plain94023http://www.lume.ufrgs.br/bitstream/10183/250302/2/001149277.pdf.txtff03ece142c0a9ff21c2924643378e33MD52ORIGINAL001149277.pdfTexto completo (inglês)application/pdf3557300http://www.lume.ufrgs.br/bitstream/10183/250302/1/001149277.pdf681e2bd1c4c81d0c13bfbc1980a06e9bMD5110183/2503022022-10-27 04:50:11.702222oai:www.lume.ufrgs.br:10183/250302Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2022-10-27T07:50:11Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
title Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
spellingShingle Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
Siqueira, Ionara Rodrigues
Vesículas extracelulares
Adipócitos
Senescência celular
Envelhecimento
MicroRNAs
Tecido adiposo
Adipocyte-derived exosomes
MicroRNA
Cellular senescence
Aging
Obesity
Adipose tissue dysfunctions
Tumors
Cell cycle
title_short Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
title_full Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
title_fullStr Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
title_full_unstemmed Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
title_sort Circulating extracellular vesicles and particles derived from adipocytes : the potential role in spreading microRNAs associated with cellular senescence
author Siqueira, Ionara Rodrigues
author_facet Siqueira, Ionara Rodrigues
Rodrigues, Andressa de Souza
Flores, Marina Siqueira
Cunha, Eduarda Letícia Vieira
Goldberg, M.
Harmon, B.
Batabyal, Rachael
Freishtat, R.
Cechinel, Laura Reck
author_role author
author2 Rodrigues, Andressa de Souza
Flores, Marina Siqueira
Cunha, Eduarda Letícia Vieira
Goldberg, M.
Harmon, B.
Batabyal, Rachael
Freishtat, R.
Cechinel, Laura Reck
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Siqueira, Ionara Rodrigues
Rodrigues, Andressa de Souza
Flores, Marina Siqueira
Cunha, Eduarda Letícia Vieira
Goldberg, M.
Harmon, B.
Batabyal, Rachael
Freishtat, R.
Cechinel, Laura Reck
dc.subject.por.fl_str_mv Vesículas extracelulares
Adipócitos
Senescência celular
Envelhecimento
MicroRNAs
Tecido adiposo
topic Vesículas extracelulares
Adipócitos
Senescência celular
Envelhecimento
MicroRNAs
Tecido adiposo
Adipocyte-derived exosomes
MicroRNA
Cellular senescence
Aging
Obesity
Adipose tissue dysfunctions
Tumors
Cell cycle
dc.subject.eng.fl_str_mv Adipocyte-derived exosomes
MicroRNA
Cellular senescence
Aging
Obesity
Adipose tissue dysfunctions
Tumors
Cell cycle
description Aging is associated with adipose tissue dysfunction and is recognized as a risk factor for shortened life span. Considering that in vitro findings have shown the involvement of microRNA in extracellular vesicles and particles (EVPs) on senescence, we hypothesized that circulating EVPs derived from adipocytes can be involved in the aging process via their microRNA cargo. We aimed to determine the microRNA profiles of circulating EVPs derived from adipocytes (FABP4+) from aged and young adult animals and to perform in silico prediction of their downstream signaling effects. Plasma was obtained from Wistar rats (3 and 21 months old), and adipocyte-derived EVPs were isolated using the commercially available kit. Fatty acid-binding protein 4 (FABP4) was used for adipocyte-derived EVPs isolation; microRNA isolation and microarray expression analysis were performed. The analysis revealed 728 miRNAs, 32 were differentially between groups (p < 0.05; fold change ≥ |1.1|), of which 15 miRNAs were upregulated and 17 were downregulated in circulating EVPs from aged animals compared to young adults. A conservative filter was applied, and 18 microRNAs had experimentally validated and highly conserved predicted mRNA targets, with a total of 2,228 mRNAs. Canonical pathways, disease and functions, and upstream regulator analyses were performed using IPA-QIAGEN, allowing a global and interconnected evaluation. IPA categories impacted negatively were cell cycle, cellular development, cellular growth and proliferation, and tissue development, while those impacted positively were “digestive system cancer” and “endocrine gland tumor.” Interestingly, the upregulated miR-15-5p targets several cyclins, such as CCND1 and CCND2, and miR-24-3p seems to target CDK4 (cyclin-dependent kinase 4); then potentially inhibiting their expression, both miRNAs can induce a negative regulation of cell cycle progression. In contrast, silencing of negative cell cycle checkpoint regulators, such as p21 and p16, can be predicted, which can induce impairment in response to genotoxic stressors. In addition, predicted targets, such as SMAD family members, seem to be involved in the positive control of digestive and endocrine tumors. Taken together, this exploratory study indicates that miRNA signature in circulating adipocyte-derived EVPs may be involved with the double-edged sword of cellular senescence, including irreversible proliferation arrest and tissue-dependent cancer, and seems to be suitable for further validation and confirmatory studies.
publishDate 2022
dc.date.accessioned.fl_str_mv 2022-10-26T04:47:10Z
dc.date.issued.fl_str_mv 2022
dc.type.driver.fl_str_mv Estrangeiro
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dc.identifier.uri.fl_str_mv http://hdl.handle.net/10183/250302
dc.identifier.issn.pt_BR.fl_str_mv 2673-6217
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Frontiers in aging. Lausanne. Vol. 3 (Aug. 2022), 867100, 19 p.
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