cAMP diffusion in Dictyostelium discoideum : a Green’s function method

Detalhes bibliográficos
Autor(a) principal: Calovi, Daniel Schardosim
Data de Publicação: 2010
Outros Autores: Brunnet, Leonardo Gregory, Almeida, Rita Maria Cunha de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/101824
Resumo: A Green’s function method is developed to approach the spatiotemporal equations describing the cAMP production in Dictyostelium discoideum, markedly reducing numerical calculations times: cAMP concentrations and gradients are calculated just at the amoeba locations. A single set of parameters is capable of reproducing the different observed behaviors, from cAMP synchronization, spiral waves and reaction-diffusion patterns to streaming and mound formation. After aggregation, the emergence of a circular motion of amoebas, breaking the radial cAMP field symmetry, is observed.
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spelling Calovi, Daniel SchardosimBrunnet, Leonardo GregoryAlmeida, Rita Maria Cunha de2014-08-26T09:26:14Z20101539-3755http://hdl.handle.net/10183/101824000754733A Green’s function method is developed to approach the spatiotemporal equations describing the cAMP production in Dictyostelium discoideum, markedly reducing numerical calculations times: cAMP concentrations and gradients are calculated just at the amoeba locations. A single set of parameters is capable of reproducing the different observed behaviors, from cAMP synchronization, spiral waves and reaction-diffusion patterns to streaming and mound formation. After aggregation, the emergence of a circular motion of amoebas, breaking the radial cAMP field symmetry, is observed.application/pdfengPhysical review. E, Statistical, nonlinear and soft matter physics. Vol. 82, no. 1 (July 2010), 011909, 8 p.Biofísica molecularBiodifusãoTransporte celularAgregacaoProteínascAMP diffusion in Dictyostelium discoideum : a Green’s function methodEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000754733.pdf000754733.pdfTexto completo (inglês)application/pdf833961http://www.lume.ufrgs.br/bitstream/10183/101824/1/000754733.pdfaefe8b8f3db68334f77af6e00a319c11MD51TEXT000754733.pdf.txt000754733.pdf.txtExtracted Texttext/plain37371http://www.lume.ufrgs.br/bitstream/10183/101824/2/000754733.pdf.txt4dd26773903e39dfd44dc4702a067e15MD52THUMBNAIL000754733.pdf.jpg000754733.pdf.jpgGenerated Thumbnailimage/jpeg2113http://www.lume.ufrgs.br/bitstream/10183/101824/3/000754733.pdf.jpg848757dd58ac42938f6173720a48b29fMD5310183/1018242024-05-18 06:24:16.904903oai:www.lume.ufrgs.br:10183/101824Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2024-05-18T09:24:16Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv cAMP diffusion in Dictyostelium discoideum : a Green’s function method
title cAMP diffusion in Dictyostelium discoideum : a Green’s function method
spellingShingle cAMP diffusion in Dictyostelium discoideum : a Green’s function method
Calovi, Daniel Schardosim
Biofísica molecular
Biodifusão
Transporte celular
Agregacao
Proteínas
title_short cAMP diffusion in Dictyostelium discoideum : a Green’s function method
title_full cAMP diffusion in Dictyostelium discoideum : a Green’s function method
title_fullStr cAMP diffusion in Dictyostelium discoideum : a Green’s function method
title_full_unstemmed cAMP diffusion in Dictyostelium discoideum : a Green’s function method
title_sort cAMP diffusion in Dictyostelium discoideum : a Green’s function method
author Calovi, Daniel Schardosim
author_facet Calovi, Daniel Schardosim
Brunnet, Leonardo Gregory
Almeida, Rita Maria Cunha de
author_role author
author2 Brunnet, Leonardo Gregory
Almeida, Rita Maria Cunha de
author2_role author
author
dc.contributor.author.fl_str_mv Calovi, Daniel Schardosim
Brunnet, Leonardo Gregory
Almeida, Rita Maria Cunha de
dc.subject.por.fl_str_mv Biofísica molecular
Biodifusão
Transporte celular
Agregacao
Proteínas
topic Biofísica molecular
Biodifusão
Transporte celular
Agregacao
Proteínas
description A Green’s function method is developed to approach the spatiotemporal equations describing the cAMP production in Dictyostelium discoideum, markedly reducing numerical calculations times: cAMP concentrations and gradients are calculated just at the amoeba locations. A single set of parameters is capable of reproducing the different observed behaviors, from cAMP synchronization, spiral waves and reaction-diffusion patterns to streaming and mound formation. After aggregation, the emergence of a circular motion of amoebas, breaking the radial cAMP field symmetry, is observed.
publishDate 2010
dc.date.issued.fl_str_mv 2010
dc.date.accessioned.fl_str_mv 2014-08-26T09:26:14Z
dc.type.driver.fl_str_mv Estrangeiro
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10183/101824
dc.identifier.issn.pt_BR.fl_str_mv 1539-3755
dc.identifier.nrb.pt_BR.fl_str_mv 000754733
identifier_str_mv 1539-3755
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Physical review. E, Statistical, nonlinear and soft matter physics. Vol. 82, no. 1 (July 2010), 011909, 8 p.
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