Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Floresta e Ambiente |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122 |
Resumo: | Abstract In view of the economic and environmental importance of Bertholletia excelsa Bonpl. for the Amazon and the reducing natural habitat area of this species, the present study proposes to examine genetic variability among accessions of Brazil nut from the Amazon rainforest. Seventeen native Brazil nut genotypes were sampled from Sinop-MT and the genomic DNA were amplified using 15 inter-simple sequence repeat (ISSR) markers. The percent polymorphism and the polymorphism information content (PIC) of each primer were determined. The primers amplified 84.62% of the polymorphic bands and 15.38% of the monomorphic bands. The PIC for each primer ranged from 0 to 0.68. The Unweighted Pair Group Method with Arithmetic Mean (UPGMA) was the most efficient in group representation, as it showed the highest cophenetic correlation coefficient (CCC = 0.92), the lowest stress (12.31%) and the lowest distortion (1.51%). The use of ISSR markers was an efficient tool in the study of genetic diversity among Brazil nut genotypes, and the genetic diversity found can be used for conservation and pre-breeding programs for this crop. |
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Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon RainforestISSRbrazil nutconservationAbstract In view of the economic and environmental importance of Bertholletia excelsa Bonpl. for the Amazon and the reducing natural habitat area of this species, the present study proposes to examine genetic variability among accessions of Brazil nut from the Amazon rainforest. Seventeen native Brazil nut genotypes were sampled from Sinop-MT and the genomic DNA were amplified using 15 inter-simple sequence repeat (ISSR) markers. The percent polymorphism and the polymorphism information content (PIC) of each primer were determined. The primers amplified 84.62% of the polymorphic bands and 15.38% of the monomorphic bands. The PIC for each primer ranged from 0 to 0.68. The Unweighted Pair Group Method with Arithmetic Mean (UPGMA) was the most efficient in group representation, as it showed the highest cophenetic correlation coefficient (CCC = 0.92), the lowest stress (12.31%) and the lowest distortion (1.51%). The use of ISSR markers was an efficient tool in the study of genetic diversity among Brazil nut genotypes, and the genetic diversity found can be used for conservation and pre-breeding programs for this crop.Instituto de Florestas da Universidade Federal Rural do Rio de Janeiro2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122Floresta e Ambiente v.27 n.4 2020reponame:Floresta e Ambienteinstname:Universidade Federal do Rio de Janeiro (UFRJ)instacron:UFRJ10.1590/2179-8087-floram-2018-0180info:eu-repo/semantics/openAccessCarpejani,Adriano AygnesPena,Guilherme FerreiraVieira,Felipe SakamotoTiago,Poliana VicenteRossi,Ana Aparecida Bandinieng2021-06-21T00:00:00Zoai:scielo:S2179-80872020000400122Revistahttps://www.floram.org/PUBhttps://old.scielo.br/oai/scielo-oai.phpfloramjournal@gmail.com||floram@ufrrj.br||2179-80871415-0980opendoar:2021-06-21T00:00Floresta e Ambiente - Universidade Federal do Rio de Janeiro (UFRJ)false |
dc.title.none.fl_str_mv |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
title |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
spellingShingle |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest Carpejani,Adriano Aygnes ISSR brazil nut conservation |
title_short |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
title_full |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
title_fullStr |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
title_full_unstemmed |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
title_sort |
Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest |
author |
Carpejani,Adriano Aygnes |
author_facet |
Carpejani,Adriano Aygnes Pena,Guilherme Ferreira Vieira,Felipe Sakamoto Tiago,Poliana Vicente Rossi,Ana Aparecida Bandini |
author_role |
author |
author2 |
Pena,Guilherme Ferreira Vieira,Felipe Sakamoto Tiago,Poliana Vicente Rossi,Ana Aparecida Bandini |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Carpejani,Adriano Aygnes Pena,Guilherme Ferreira Vieira,Felipe Sakamoto Tiago,Poliana Vicente Rossi,Ana Aparecida Bandini |
dc.subject.por.fl_str_mv |
ISSR brazil nut conservation |
topic |
ISSR brazil nut conservation |
description |
Abstract In view of the economic and environmental importance of Bertholletia excelsa Bonpl. for the Amazon and the reducing natural habitat area of this species, the present study proposes to examine genetic variability among accessions of Brazil nut from the Amazon rainforest. Seventeen native Brazil nut genotypes were sampled from Sinop-MT and the genomic DNA were amplified using 15 inter-simple sequence repeat (ISSR) markers. The percent polymorphism and the polymorphism information content (PIC) of each primer were determined. The primers amplified 84.62% of the polymorphic bands and 15.38% of the monomorphic bands. The PIC for each primer ranged from 0 to 0.68. The Unweighted Pair Group Method with Arithmetic Mean (UPGMA) was the most efficient in group representation, as it showed the highest cophenetic correlation coefficient (CCC = 0.92), the lowest stress (12.31%) and the lowest distortion (1.51%). The use of ISSR markers was an efficient tool in the study of genetic diversity among Brazil nut genotypes, and the genetic diversity found can be used for conservation and pre-breeding programs for this crop. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/2179-8087-floram-2018-0180 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto de Florestas da Universidade Federal Rural do Rio de Janeiro |
publisher.none.fl_str_mv |
Instituto de Florestas da Universidade Federal Rural do Rio de Janeiro |
dc.source.none.fl_str_mv |
Floresta e Ambiente v.27 n.4 2020 reponame:Floresta e Ambiente instname:Universidade Federal do Rio de Janeiro (UFRJ) instacron:UFRJ |
instname_str |
Universidade Federal do Rio de Janeiro (UFRJ) |
instacron_str |
UFRJ |
institution |
UFRJ |
reponame_str |
Floresta e Ambiente |
collection |
Floresta e Ambiente |
repository.name.fl_str_mv |
Floresta e Ambiente - Universidade Federal do Rio de Janeiro (UFRJ) |
repository.mail.fl_str_mv |
floramjournal@gmail.com||floram@ufrrj.br|| |
_version_ |
1750128143702687744 |