Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon

Detalhes bibliográficos
Autor(a) principal: Monte, Natasha
Data de Publicação: 2023
Outros Autores: Rodrigues, Juliana Carla Gomes, Vinagre, Lui Wallacy Morikawa Souza, Pastana, Lucas Favacho, Alcântara, Angélica Leite de, Leitão, Luciana Pereira Colares, Santos, André Maurício Ribeiro dos, Fernandes, Marianne Rodrigues, Santos, Andrea Kely Campos Ribeiro dos, Guerreiro, João Farias, Assumpção, Paulo Pimentel, Santos, Sidney, Souza, Sandro José de, Santos, Ney Pereira Carneiro dos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/handle/123456789/52230
Resumo: Aims: While lifestyle factors are strongly associated with Type 2 diabetes (T2DM), genetic characteristics also play a role. However, much of the research on T2DM genetics focuses on European and Asian populations, leaving underrepresented groups, such as indigenous populations with high diabetes prevalence, understudied. Methods: We characterized the molecular profile of 10 genes involved in T2DM risk through complete exome sequencing of 64 indigenous individuals belonging to 12 different Amazonian ethnic groups. Results: The analysis revealed 157 variants, including four exclusive variants in the indigenous population located in the NOTCH2 and WFS1 genes with a modifier or moderate impact on protein effectiveness. Furthermore, a high impact variant in NOTCH2 was also found. Additionally, the frequency of 10 variants in the indigenous group showed significant differences when compared to other global populations that were evaluated. Conclusion: Our study identified 4 novel variants associated with T2DM in the NOTCH2 and WFS1 genes in the Amazonian indigenous populations we studied. In addition, a variant with a high predicted impact in NOTCH2 was also observed. These findings represent a valuable starting point for conducting further association and functional studies, which could help to improve our understanding of the unique characteristics of this population
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spelling Monte, NatashaRodrigues, Juliana Carla GomesVinagre, Lui Wallacy Morikawa SouzaPastana, Lucas FavachoAlcântara, Angélica Leite deLeitão, Luciana Pereira ColaresSantos, André Maurício Ribeiro dosFernandes, Marianne RodriguesSantos, Andrea Kely Campos Ribeiro dosGuerreiro, João FariasAssumpção, Paulo PimentelSantos, SidneySouza, Sandro José deSantos, Ney Pereira Carneiro dos2023-04-25T19:09:25Z2023-04-25T19:09:25Z2023-03MONTE, Natasha; RODRIGUES, Juliana Carla Gomes; VINAGRE, Lui Wallacy Morikawa Souza; PASTANA, Lucas Favacho; ALCÂNTARA, Angélica Leite de; LEITÃO, Luciana Pereira Colares; RIBEIRO-DOS-SANTOS, André Maurício; FERNANDES, Marianne Rodrigues; RIBEIRO-DOS-SANTOS, Ândrea; GUERREIRO, João Farias; GUERREIRO, Paulo Pimentel; SANTOS, Sidney; SOUZA, Sandro José de; SANTOS, Ney Pereira Carneiro dos. Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon. Diabetes Research And Clinical Practice, [S.l.], v. 199, p. 110641, mar. 2023. Doi: http://dx.doi.org/10.1016/j.diabres.2023.110641. Disponível em: https://www.sciencedirect.com/science/article/pii/S0168822723004011?via%3Dihub. Acesso em: 25 abr. 2023.https://repositorio.ufrn.br/handle/123456789/5223010.1016/j.diabres.2023.110641Elsevier BVAtribuição-NãoComercial-SemDerivados 3.0 Brasilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessExomeGenomicsIndigenous populationsT2DMEpidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazoninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAims: While lifestyle factors are strongly associated with Type 2 diabetes (T2DM), genetic characteristics also play a role. However, much of the research on T2DM genetics focuses on European and Asian populations, leaving underrepresented groups, such as indigenous populations with high diabetes prevalence, understudied. Methods: We characterized the molecular profile of 10 genes involved in T2DM risk through complete exome sequencing of 64 indigenous individuals belonging to 12 different Amazonian ethnic groups. Results: The analysis revealed 157 variants, including four exclusive variants in the indigenous population located in the NOTCH2 and WFS1 genes with a modifier or moderate impact on protein effectiveness. Furthermore, a high impact variant in NOTCH2 was also found. Additionally, the frequency of 10 variants in the indigenous group showed significant differences when compared to other global populations that were evaluated. Conclusion: Our study identified 4 novel variants associated with T2DM in the NOTCH2 and WFS1 genes in the Amazonian indigenous populations we studied. In addition, a variant with a high predicted impact in NOTCH2 was also observed. These findings represent a valuable starting point for conducting further association and functional studies, which could help to improve our understanding of the unique characteristics of this populationengreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNORIGINALEpidemiological-molecularProfile_Souza_2023.pdfEpidemiological-molecularProfile_Souza_2023.pdfEpidemiological-molecularProfile_Souza_2023application/pdf2289406https://repositorio.ufrn.br/bitstream/123456789/52230/1/Epidemiological-molecularProfile_Souza_2023.pdf63de1987b7f4f1c193cd852698d579ebMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8811https://repositorio.ufrn.br/bitstream/123456789/52230/2/license_rdfe39d27027a6cc9cb039ad269a5db8e34MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81484https://repositorio.ufrn.br/bitstream/123456789/52230/3/license.txte9597aa2854d128fd968be5edc8a28d9MD53123456789/522302023-04-25 16:09:25.376oai:https://repositorio.ufrn.br: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Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2023-04-25T19:09:25Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.pt_BR.fl_str_mv Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
title Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
spellingShingle Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
Monte, Natasha
Exome
Genomics
Indigenous populations
T2DM
title_short Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
title_full Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
title_fullStr Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
title_full_unstemmed Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
title_sort Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
author Monte, Natasha
author_facet Monte, Natasha
Rodrigues, Juliana Carla Gomes
Vinagre, Lui Wallacy Morikawa Souza
Pastana, Lucas Favacho
Alcântara, Angélica Leite de
Leitão, Luciana Pereira Colares
Santos, André Maurício Ribeiro dos
Fernandes, Marianne Rodrigues
Santos, Andrea Kely Campos Ribeiro dos
Guerreiro, João Farias
Assumpção, Paulo Pimentel
Santos, Sidney
Souza, Sandro José de
Santos, Ney Pereira Carneiro dos
author_role author
author2 Rodrigues, Juliana Carla Gomes
Vinagre, Lui Wallacy Morikawa Souza
Pastana, Lucas Favacho
Alcântara, Angélica Leite de
Leitão, Luciana Pereira Colares
Santos, André Maurício Ribeiro dos
Fernandes, Marianne Rodrigues
Santos, Andrea Kely Campos Ribeiro dos
Guerreiro, João Farias
Assumpção, Paulo Pimentel
Santos, Sidney
Souza, Sandro José de
Santos, Ney Pereira Carneiro dos
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Monte, Natasha
Rodrigues, Juliana Carla Gomes
Vinagre, Lui Wallacy Morikawa Souza
Pastana, Lucas Favacho
Alcântara, Angélica Leite de
Leitão, Luciana Pereira Colares
Santos, André Maurício Ribeiro dos
Fernandes, Marianne Rodrigues
Santos, Andrea Kely Campos Ribeiro dos
Guerreiro, João Farias
Assumpção, Paulo Pimentel
Santos, Sidney
Souza, Sandro José de
Santos, Ney Pereira Carneiro dos
dc.subject.por.fl_str_mv Exome
Genomics
Indigenous populations
T2DM
topic Exome
Genomics
Indigenous populations
T2DM
description Aims: While lifestyle factors are strongly associated with Type 2 diabetes (T2DM), genetic characteristics also play a role. However, much of the research on T2DM genetics focuses on European and Asian populations, leaving underrepresented groups, such as indigenous populations with high diabetes prevalence, understudied. Methods: We characterized the molecular profile of 10 genes involved in T2DM risk through complete exome sequencing of 64 indigenous individuals belonging to 12 different Amazonian ethnic groups. Results: The analysis revealed 157 variants, including four exclusive variants in the indigenous population located in the NOTCH2 and WFS1 genes with a modifier or moderate impact on protein effectiveness. Furthermore, a high impact variant in NOTCH2 was also found. Additionally, the frequency of 10 variants in the indigenous group showed significant differences when compared to other global populations that were evaluated. Conclusion: Our study identified 4 novel variants associated with T2DM in the NOTCH2 and WFS1 genes in the Amazonian indigenous populations we studied. In addition, a variant with a high predicted impact in NOTCH2 was also observed. These findings represent a valuable starting point for conducting further association and functional studies, which could help to improve our understanding of the unique characteristics of this population
publishDate 2023
dc.date.accessioned.fl_str_mv 2023-04-25T19:09:25Z
dc.date.available.fl_str_mv 2023-04-25T19:09:25Z
dc.date.issued.fl_str_mv 2023-03
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv MONTE, Natasha; RODRIGUES, Juliana Carla Gomes; VINAGRE, Lui Wallacy Morikawa Souza; PASTANA, Lucas Favacho; ALCÂNTARA, Angélica Leite de; LEITÃO, Luciana Pereira Colares; RIBEIRO-DOS-SANTOS, André Maurício; FERNANDES, Marianne Rodrigues; RIBEIRO-DOS-SANTOS, Ândrea; GUERREIRO, João Farias; GUERREIRO, Paulo Pimentel; SANTOS, Sidney; SOUZA, Sandro José de; SANTOS, Ney Pereira Carneiro dos. Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon. Diabetes Research And Clinical Practice, [S.l.], v. 199, p. 110641, mar. 2023. Doi: http://dx.doi.org/10.1016/j.diabres.2023.110641. Disponível em: https://www.sciencedirect.com/science/article/pii/S0168822723004011?via%3Dihub. Acesso em: 25 abr. 2023.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/handle/123456789/52230
dc.identifier.doi.none.fl_str_mv 10.1016/j.diabres.2023.110641
identifier_str_mv MONTE, Natasha; RODRIGUES, Juliana Carla Gomes; VINAGRE, Lui Wallacy Morikawa Souza; PASTANA, Lucas Favacho; ALCÂNTARA, Angélica Leite de; LEITÃO, Luciana Pereira Colares; RIBEIRO-DOS-SANTOS, André Maurício; FERNANDES, Marianne Rodrigues; RIBEIRO-DOS-SANTOS, Ândrea; GUERREIRO, João Farias; GUERREIRO, Paulo Pimentel; SANTOS, Sidney; SOUZA, Sandro José de; SANTOS, Ney Pereira Carneiro dos. Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon. Diabetes Research And Clinical Practice, [S.l.], v. 199, p. 110641, mar. 2023. Doi: http://dx.doi.org/10.1016/j.diabres.2023.110641. Disponível em: https://www.sciencedirect.com/science/article/pii/S0168822723004011?via%3Dihub. Acesso em: 25 abr. 2023.
10.1016/j.diabres.2023.110641
url https://repositorio.ufrn.br/handle/123456789/52230
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