Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UFRN |
Texto Completo: | https://repositorio.ufrn.br/handle/123456789/52230 |
Resumo: | Aims: While lifestyle factors are strongly associated with Type 2 diabetes (T2DM), genetic characteristics also play a role. However, much of the research on T2DM genetics focuses on European and Asian populations, leaving underrepresented groups, such as indigenous populations with high diabetes prevalence, understudied. Methods: We characterized the molecular profile of 10 genes involved in T2DM risk through complete exome sequencing of 64 indigenous individuals belonging to 12 different Amazonian ethnic groups. Results: The analysis revealed 157 variants, including four exclusive variants in the indigenous population located in the NOTCH2 and WFS1 genes with a modifier or moderate impact on protein effectiveness. Furthermore, a high impact variant in NOTCH2 was also found. Additionally, the frequency of 10 variants in the indigenous group showed significant differences when compared to other global populations that were evaluated. Conclusion: Our study identified 4 novel variants associated with T2DM in the NOTCH2 and WFS1 genes in the Amazonian indigenous populations we studied. In addition, a variant with a high predicted impact in NOTCH2 was also observed. These findings represent a valuable starting point for conducting further association and functional studies, which could help to improve our understanding of the unique characteristics of this population |
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Monte, NatashaRodrigues, Juliana Carla GomesVinagre, Lui Wallacy Morikawa SouzaPastana, Lucas FavachoAlcântara, Angélica Leite deLeitão, Luciana Pereira ColaresSantos, André Maurício Ribeiro dosFernandes, Marianne RodriguesSantos, Andrea Kely Campos Ribeiro dosGuerreiro, João FariasAssumpção, Paulo PimentelSantos, SidneySouza, Sandro José deSantos, Ney Pereira Carneiro dos2023-04-25T19:09:25Z2023-04-25T19:09:25Z2023-03MONTE, Natasha; RODRIGUES, Juliana Carla Gomes; VINAGRE, Lui Wallacy Morikawa Souza; PASTANA, Lucas Favacho; ALCÂNTARA, Angélica Leite de; LEITÃO, Luciana Pereira Colares; RIBEIRO-DOS-SANTOS, André Maurício; FERNANDES, Marianne Rodrigues; RIBEIRO-DOS-SANTOS, Ândrea; GUERREIRO, João Farias; GUERREIRO, Paulo Pimentel; SANTOS, Sidney; SOUZA, Sandro José de; SANTOS, Ney Pereira Carneiro dos. Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon. Diabetes Research And Clinical Practice, [S.l.], v. 199, p. 110641, mar. 2023. Doi: http://dx.doi.org/10.1016/j.diabres.2023.110641. Disponível em: https://www.sciencedirect.com/science/article/pii/S0168822723004011?via%3Dihub. Acesso em: 25 abr. 2023.https://repositorio.ufrn.br/handle/123456789/5223010.1016/j.diabres.2023.110641Elsevier BVAtribuição-NãoComercial-SemDerivados 3.0 Brasilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessExomeGenomicsIndigenous populationsT2DMEpidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazoninfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAims: While lifestyle factors are strongly associated with Type 2 diabetes (T2DM), genetic characteristics also play a role. However, much of the research on T2DM genetics focuses on European and Asian populations, leaving underrepresented groups, such as indigenous populations with high diabetes prevalence, understudied. Methods: We characterized the molecular profile of 10 genes involved in T2DM risk through complete exome sequencing of 64 indigenous individuals belonging to 12 different Amazonian ethnic groups. Results: The analysis revealed 157 variants, including four exclusive variants in the indigenous population located in the NOTCH2 and WFS1 genes with a modifier or moderate impact on protein effectiveness. Furthermore, a high impact variant in NOTCH2 was also found. Additionally, the frequency of 10 variants in the indigenous group showed significant differences when compared to other global populations that were evaluated. Conclusion: Our study identified 4 novel variants associated with T2DM in the NOTCH2 and WFS1 genes in the Amazonian indigenous populations we studied. In addition, a variant with a high predicted impact in NOTCH2 was also observed. These findings represent a valuable starting point for conducting further association and functional studies, which could help to improve our understanding of the unique characteristics of this populationengreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNORIGINALEpidemiological-molecularProfile_Souza_2023.pdfEpidemiological-molecularProfile_Souza_2023.pdfEpidemiological-molecularProfile_Souza_2023application/pdf2289406https://repositorio.ufrn.br/bitstream/123456789/52230/1/Epidemiological-molecularProfile_Souza_2023.pdf63de1987b7f4f1c193cd852698d579ebMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8811https://repositorio.ufrn.br/bitstream/123456789/52230/2/license_rdfe39d27027a6cc9cb039ad269a5db8e34MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81484https://repositorio.ufrn.br/bitstream/123456789/52230/3/license.txte9597aa2854d128fd968be5edc8a28d9MD53123456789/522302023-04-25 16:09:25.376oai:https://repositorio.ufrn.br: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Repositório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2023-04-25T19:09:25Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false |
dc.title.pt_BR.fl_str_mv |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
title |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
spellingShingle |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon Monte, Natasha Exome Genomics Indigenous populations T2DM |
title_short |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
title_full |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
title_fullStr |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
title_full_unstemmed |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
title_sort |
Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon |
author |
Monte, Natasha |
author_facet |
Monte, Natasha Rodrigues, Juliana Carla Gomes Vinagre, Lui Wallacy Morikawa Souza Pastana, Lucas Favacho Alcântara, Angélica Leite de Leitão, Luciana Pereira Colares Santos, André Maurício Ribeiro dos Fernandes, Marianne Rodrigues Santos, Andrea Kely Campos Ribeiro dos Guerreiro, João Farias Assumpção, Paulo Pimentel Santos, Sidney Souza, Sandro José de Santos, Ney Pereira Carneiro dos |
author_role |
author |
author2 |
Rodrigues, Juliana Carla Gomes Vinagre, Lui Wallacy Morikawa Souza Pastana, Lucas Favacho Alcântara, Angélica Leite de Leitão, Luciana Pereira Colares Santos, André Maurício Ribeiro dos Fernandes, Marianne Rodrigues Santos, Andrea Kely Campos Ribeiro dos Guerreiro, João Farias Assumpção, Paulo Pimentel Santos, Sidney Souza, Sandro José de Santos, Ney Pereira Carneiro dos |
author2_role |
author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Monte, Natasha Rodrigues, Juliana Carla Gomes Vinagre, Lui Wallacy Morikawa Souza Pastana, Lucas Favacho Alcântara, Angélica Leite de Leitão, Luciana Pereira Colares Santos, André Maurício Ribeiro dos Fernandes, Marianne Rodrigues Santos, Andrea Kely Campos Ribeiro dos Guerreiro, João Farias Assumpção, Paulo Pimentel Santos, Sidney Souza, Sandro José de Santos, Ney Pereira Carneiro dos |
dc.subject.por.fl_str_mv |
Exome Genomics Indigenous populations T2DM |
topic |
Exome Genomics Indigenous populations T2DM |
description |
Aims: While lifestyle factors are strongly associated with Type 2 diabetes (T2DM), genetic characteristics also play a role. However, much of the research on T2DM genetics focuses on European and Asian populations, leaving underrepresented groups, such as indigenous populations with high diabetes prevalence, understudied. Methods: We characterized the molecular profile of 10 genes involved in T2DM risk through complete exome sequencing of 64 indigenous individuals belonging to 12 different Amazonian ethnic groups. Results: The analysis revealed 157 variants, including four exclusive variants in the indigenous population located in the NOTCH2 and WFS1 genes with a modifier or moderate impact on protein effectiveness. Furthermore, a high impact variant in NOTCH2 was also found. Additionally, the frequency of 10 variants in the indigenous group showed significant differences when compared to other global populations that were evaluated. Conclusion: Our study identified 4 novel variants associated with T2DM in the NOTCH2 and WFS1 genes in the Amazonian indigenous populations we studied. In addition, a variant with a high predicted impact in NOTCH2 was also observed. These findings represent a valuable starting point for conducting further association and functional studies, which could help to improve our understanding of the unique characteristics of this population |
publishDate |
2023 |
dc.date.accessioned.fl_str_mv |
2023-04-25T19:09:25Z |
dc.date.available.fl_str_mv |
2023-04-25T19:09:25Z |
dc.date.issued.fl_str_mv |
2023-03 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
MONTE, Natasha; RODRIGUES, Juliana Carla Gomes; VINAGRE, Lui Wallacy Morikawa Souza; PASTANA, Lucas Favacho; ALCÂNTARA, Angélica Leite de; LEITÃO, Luciana Pereira Colares; RIBEIRO-DOS-SANTOS, André Maurício; FERNANDES, Marianne Rodrigues; RIBEIRO-DOS-SANTOS, Ândrea; GUERREIRO, João Farias; GUERREIRO, Paulo Pimentel; SANTOS, Sidney; SOUZA, Sandro José de; SANTOS, Ney Pereira Carneiro dos. Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon. Diabetes Research And Clinical Practice, [S.l.], v. 199, p. 110641, mar. 2023. Doi: http://dx.doi.org/10.1016/j.diabres.2023.110641. Disponível em: https://www.sciencedirect.com/science/article/pii/S0168822723004011?via%3Dihub. Acesso em: 25 abr. 2023. |
dc.identifier.uri.fl_str_mv |
https://repositorio.ufrn.br/handle/123456789/52230 |
dc.identifier.doi.none.fl_str_mv |
10.1016/j.diabres.2023.110641 |
identifier_str_mv |
MONTE, Natasha; RODRIGUES, Juliana Carla Gomes; VINAGRE, Lui Wallacy Morikawa Souza; PASTANA, Lucas Favacho; ALCÂNTARA, Angélica Leite de; LEITÃO, Luciana Pereira Colares; RIBEIRO-DOS-SANTOS, André Maurício; FERNANDES, Marianne Rodrigues; RIBEIRO-DOS-SANTOS, Ândrea; GUERREIRO, João Farias; GUERREIRO, Paulo Pimentel; SANTOS, Sidney; SOUZA, Sandro José de; SANTOS, Ney Pereira Carneiro dos. Epidemiological-molecular profile of variants associated with type 2 diabetes mellitus in indigenous populations from the Brazilian Amazon. Diabetes Research And Clinical Practice, [S.l.], v. 199, p. 110641, mar. 2023. Doi: http://dx.doi.org/10.1016/j.diabres.2023.110641. Disponível em: https://www.sciencedirect.com/science/article/pii/S0168822723004011?via%3Dihub. Acesso em: 25 abr. 2023. 10.1016/j.diabres.2023.110641 |
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https://repositorio.ufrn.br/handle/123456789/52230 |
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openAccess |
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Elsevier BV |
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Elsevier BV |
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