Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray

Detalhes bibliográficos
Autor(a) principal: Silva, Elielson Veloso da
Data de Publicação: 2016
Tipo de documento: Trabalho de conclusão de curso
Idioma: por
Título da fonte: Repositório Institucional da UFRN
Texto Completo: https://repositorio.ufrn.br/handle/123456789/43259
Resumo: Human mesenchymal stem cells (hMSC) are multipotent stem cells of stromal origin. These cells have been widely used for cell therapy means in regenerative medicine due to their tissue diferentiation capacity as well as in vitro expansion and functional plasticity. The effects of senescence on genetic stability has been discussed througout the years, so that a previous study has found that stem cell senescence is associated with chromossomal abnormalities, which can explain the reason why these cells have been linked to age-related diseases such as cancer and Alzheimer’s disease. Furthermore, genetic instability can be responsible for the acquisition of tumorigenesis features in vitro and in vivo. In this study, the expression of DNA repair pathways of umbilical cord- derived hMSC harboring a paracentric chromosomal inversion (MSC/inv) was compared to a normal karyotype lineage (MSC/n) in early (Passage 9) and late (Passage 18) in vitro passages. Microarray data from these cell groups was analyzed through two in silico approaches: Gene Set Enrichment Analysis (GSEA) and gene prioritization (Endeavour). When compared to young stem cells, our results show that both groups of senescent stem cells present reduced DNA repair expression. By looking at the two groups of young stem cells, we found that there is no differential expression of DNA repair pathways between them, whereas senescent stem cell with inverted karyotype showed lower expression of DNA repair pathways. These findings support the idea that senescence alters DNA repair capacity of CTMs, given the inhibition of several DNA repair pathways, especially on MSCs/inv, which presented accentuated genetic instability.
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spelling Silva, Elielson Veloso daSilbiger, Vivian NogueiraLeal, Angélica Maria de Sousa2016-12-22T14:53:41Z2021-10-06T11:18:07Z2016-12-22T14:53:41Z2021-10-06T11:18:07Z2016-122011018240SILVA, Elielson Veloso da. Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray. 2016. 104 f. Trabalho de Conclusão de Curso (Graduação em Biomedicina)- Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, 2016.https://repositorio.ufrn.br/handle/123456789/43259Human mesenchymal stem cells (hMSC) are multipotent stem cells of stromal origin. These cells have been widely used for cell therapy means in regenerative medicine due to their tissue diferentiation capacity as well as in vitro expansion and functional plasticity. The effects of senescence on genetic stability has been discussed througout the years, so that a previous study has found that stem cell senescence is associated with chromossomal abnormalities, which can explain the reason why these cells have been linked to age-related diseases such as cancer and Alzheimer’s disease. Furthermore, genetic instability can be responsible for the acquisition of tumorigenesis features in vitro and in vivo. In this study, the expression of DNA repair pathways of umbilical cord- derived hMSC harboring a paracentric chromosomal inversion (MSC/inv) was compared to a normal karyotype lineage (MSC/n) in early (Passage 9) and late (Passage 18) in vitro passages. Microarray data from these cell groups was analyzed through two in silico approaches: Gene Set Enrichment Analysis (GSEA) and gene prioritization (Endeavour). When compared to young stem cells, our results show that both groups of senescent stem cells present reduced DNA repair expression. By looking at the two groups of young stem cells, we found that there is no differential expression of DNA repair pathways between them, whereas senescent stem cell with inverted karyotype showed lower expression of DNA repair pathways. These findings support the idea that senescence alters DNA repair capacity of CTMs, given the inhibition of several DNA repair pathways, especially on MSCs/inv, which presented accentuated genetic instability.Células-tronco mesenquimais, do inglês Mesenchymal Stem cells (hMSC) são células multipotentes de origem estromal. Essas células têm sido amplamente utilizadas no campo da medicina regenerativa devido a sua capacidade de diferenciação tecidual, plasticidade funcional, bem como possibilidade de expansão in vitro. Os efeitos da senescência na estabilidade genética têm sido discutidos ao longo dos anos, de modo que um estudo anterior observou que a senescência em células-tronco mesenquimais está associada com anormalidades cromossômicas, o que pode levar ao surgimento de doenças relacionadas à idade, tais como câncer e Alzheimer, já que, por exemplo, a instabilidade genética pode ser responsável pela aquisição de características tumorigênicas tanto in vitro como in vivo. Nesse estudo, a expressão de vias de reparo de DNA em células-tronco mesenquimais humanas extraídas do cordão umbilical e que apresentam uma inversão cromossômica paracêntrica constitucional (CTMs/inv) foi comparada à expressão em células-tronco com cariótipo normal (CTMs/norm) quando jovens (Passagem 9) e senescentes (Passagem 18). Os dados de microarranjo desses grupos celulares foram analisados in silico através de duas ferramentas de bioinformática, Gene Set Enrichiment Analysis (GSEA) e Gene Prioritization (Endeavour). Os resultados mostraram que, quando comparadas com as células jovens, ambos os grupos de células senescentes apresentaram vias de reparo de DNA menos expressas. Já ao analisarmos os dois grupos de células jovens, não foi observada expressão diferencial de vias de reparo de DNA, enquanto que CTMs/inv possuem vias de reparo de DNA menos expressas em comparação com as células normais senescentes. Esses resultados sugerem que a senescência afeta a capacidade que as células tronco possuem de reparar danos no DNA, dada a inibição de diversas vias de reparo, principalmente em CTMs/inv, que apresentam instabilidade genética acentuada.Universidade Federal do Rio Grande do NorteUFRNBrasilBiomedicinaCélulas-tronco mesenquimais humanas (CTMs)SenescênciaReparo de DNAInstabilidade genéticaCélulas-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarrayinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/bachelorThesisinfo:eu-repo/semantics/openAccessporreponame:Repositório Institucional da UFRNinstname:Universidade Federal do Rio Grande do Norte (UFRN)instacron:UFRNTEXTCélulastroncoMesenquimais_Silva_2016.pdf.txtExtracted texttext/plain168129https://repositorio.ufrn.br/bitstream/123456789/43259/1/C%c3%a9lulastroncoMesenquimais_Silva_2016.pdf.txt2366772546e08d5e199dc346ef09521bMD51Células-troncoMesenquimaisHumanas_Silva_2016.pdf.txtExtracted texttext/plain168129https://repositorio.ufrn.br/bitstream/123456789/43259/2/C%c3%a9lulas-troncoMesenquimaisHumanas_Silva_2016.pdf.txt2366772546e08d5e199dc346ef09521bMD52LICENSElicense.txttext/plain756https://repositorio.ufrn.br/bitstream/123456789/43259/3/license.txta80a9cda2756d355b388cc443c3d8a43MD53ORIGINALCélulas-troncoMesenquimaisHumanas_Silva_2016.pdfMonografiaapplication/pdf2755246https://repositorio.ufrn.br/bitstream/123456789/43259/4/C%c3%a9lulas-troncoMesenquimaisHumanas_Silva_2016.pdfb550c71bc8e46454a54c49cbd12b2c8aMD54123456789/432592021-10-06 08:18:08.039oai:https://repositorio.ufrn.br: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ório de PublicaçõesPUBhttp://repositorio.ufrn.br/oai/opendoar:2021-10-06T11:18:08Repositório Institucional da UFRN - Universidade Federal do Rio Grande do Norte (UFRN)false
dc.title.pr_BR.fl_str_mv Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
title Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
spellingShingle Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
Silva, Elielson Veloso da
Células-tronco mesenquimais humanas (CTMs)
Senescência
Reparo de DNA
Instabilidade genética
title_short Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
title_full Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
title_fullStr Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
title_full_unstemmed Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
title_sort Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray
author Silva, Elielson Veloso da
author_facet Silva, Elielson Veloso da
author_role author
dc.contributor.referees1.none.fl_str_mv Silbiger, Vivian Nogueira
dc.contributor.referees2.none.fl_str_mv Leal, Angélica Maria de Sousa
dc.contributor.author.fl_str_mv Silva, Elielson Veloso da
dc.subject.pr_BR.fl_str_mv Células-tronco mesenquimais humanas (CTMs)
Senescência
Reparo de DNA
Instabilidade genética
topic Células-tronco mesenquimais humanas (CTMs)
Senescência
Reparo de DNA
Instabilidade genética
description Human mesenchymal stem cells (hMSC) are multipotent stem cells of stromal origin. These cells have been widely used for cell therapy means in regenerative medicine due to their tissue diferentiation capacity as well as in vitro expansion and functional plasticity. The effects of senescence on genetic stability has been discussed througout the years, so that a previous study has found that stem cell senescence is associated with chromossomal abnormalities, which can explain the reason why these cells have been linked to age-related diseases such as cancer and Alzheimer’s disease. Furthermore, genetic instability can be responsible for the acquisition of tumorigenesis features in vitro and in vivo. In this study, the expression of DNA repair pathways of umbilical cord- derived hMSC harboring a paracentric chromosomal inversion (MSC/inv) was compared to a normal karyotype lineage (MSC/n) in early (Passage 9) and late (Passage 18) in vitro passages. Microarray data from these cell groups was analyzed through two in silico approaches: Gene Set Enrichment Analysis (GSEA) and gene prioritization (Endeavour). When compared to young stem cells, our results show that both groups of senescent stem cells present reduced DNA repair expression. By looking at the two groups of young stem cells, we found that there is no differential expression of DNA repair pathways between them, whereas senescent stem cell with inverted karyotype showed lower expression of DNA repair pathways. These findings support the idea that senescence alters DNA repair capacity of CTMs, given the inhibition of several DNA repair pathways, especially on MSCs/inv, which presented accentuated genetic instability.
publishDate 2016
dc.date.accessioned.fl_str_mv 2016-12-22T14:53:41Z
2021-10-06T11:18:07Z
dc.date.available.fl_str_mv 2016-12-22T14:53:41Z
2021-10-06T11:18:07Z
dc.date.issued.fl_str_mv 2016-12
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/bachelorThesis
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dc.identifier.pr_BR.fl_str_mv 2011018240
dc.identifier.citation.fl_str_mv SILVA, Elielson Veloso da. Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray. 2016. 104 f. Trabalho de Conclusão de Curso (Graduação em Biomedicina)- Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, 2016.
dc.identifier.uri.fl_str_mv https://repositorio.ufrn.br/handle/123456789/43259
identifier_str_mv 2011018240
SILVA, Elielson Veloso da. Células-tronco mesenquimais humanas e reparo de DNA: Uma análise in silico de dados de microarray. 2016. 104 f. Trabalho de Conclusão de Curso (Graduação em Biomedicina)- Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, 2016.
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dc.publisher.none.fl_str_mv Universidade Federal do Rio Grande do Norte
dc.publisher.initials.fl_str_mv UFRN
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Biomedicina
publisher.none.fl_str_mv Universidade Federal do Rio Grande do Norte
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